Os12g0570000

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0570000| Description = Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11)| Version = NM_001073609.2 GI:2...")
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Gene Name

Os12g0570000

Description

Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11)

Version

NM_001073609.2 GI:297613389 GeneID:4352575

Length

4942 bp

Definition

Oryza sativa Japonica Group Os12g0570000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23671988..23676929

Sequence Coding Region

23672341..23673537,23673633..23674067,23674162..23674278,23676764..23676928

Expression

GEO Profiles:Os12g0570000

Genome Context

<gbrowseImage1> name=NC_008405:23671988..23676929 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23671988..23676929 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggcggattcggctgctggggcccttcgtggaggagctccgggagcggaggcggggggagggggagggggaggaggaggagcgggcgctggcgccgctcgccgacgcgctcgaggcggcgctcgcgctgctccggctcggccgcgaggggagcaggatctccttggttcttgagagggacagcgtaatgaaaaagtttcagggagtaattttgcagctggaacaagctctgtgcgacattccgtacaatgaattggatatatcagatgaagttagagagcaggttgagttagtgcacgcacagctcaaaagagcaaaagaacggattgatatgcctgacgatgaattctacaatgatctactatctgtatatgacaagaactatgacccaagtgcagaactggctattcttggaagattgtcagaaaagctacacttgatgacaatcaccgatctcacgcaagaatcactcgccttacatgagatggtcgcatccggcggtggtcaggacccaggagaacacattgagagaatgtcaatgctactgaagaagattaaggattttgtgcaaacacagaaccctgacatggggcctcctatggcttccagggtattggattcaaatggggattcaaggcctataaccattcctgacgagttccgatgtccaatttctcttgagctgatgaaggatcctgttatagtgtctacagggcagacatatgagcgggcatgcattgagaaatggatagcatcaggccatcatacctgcccaaccacgcaacagaagatgtcaacctcagcattgacgccaaactatgtccttagaagtctcatttcccagtggtgtgaaaccaatgggatggagccaccaaagcgctcaacccagcctaacaagcctacgcctgcatgctcttcgagtgaacgtgctaacatcgatgctctgctatctaagttatgctctccagacactgaggagcagagatcagctgctgcagagcttcgcctccttgcaaagcggaatgcaaacaaccggatttgcattgctgaggcaggtgccattcccttgctattgagtctgctgtcctcatctgacctacggactcaagaacatgcagttactgcccttctgaacctctccatacatgaggacaataaggcaagcatcatatcatctggtgctgtcccaagcatagtccatgttctgaagaatggcagcatggaggcacgggagaatgctgcggccacactttttagtctctcagtgattgatgaatataaagtgacaattggagggatgggggctatccctgcgcttgtagtgctgttaggcgagggtagccagcgggggaagaaggatgcagcagcagctctcttcaacttgtgtatataccaagggaacaagggacgagcgattcgagctggccttgtgccactcatcatggggctggtgaccaaccccacaggagcgctcatggatgaggctatggcaatactctccatactatccagccaccctgagggcaaggcagcgattggggcggcagagcctgtccctgtgcttgtggagatgatcggaagcggaaccccgagaaatcgagagaatgctgcggctgtcatgctacatctgtgcagtggagagcaccatcttgtgcatttagctcgtgcgcaggagtgcgggatcatggtcccgttgcgggagctggctttgaacggcaccgatagggggaagaggaaggctgtgcagctgctcgagcggatgagcagattcctagtccagcaacaagaggaacaggagtcccagtcgcaagcctccgcgcaggtccctcctcaggccacccctgagcaggtcccggaaaatgacatccctgaacaattggacagcccagcgtctcaataccctatggttgtatga</cdnaseq>

Protein Sequence

<aaseq>RRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALL RLGREGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQL KRAKERIDMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALH EMVASGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPD EFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR SLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAEL RLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISS GAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRG KKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEG KAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLR ELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQSQASAQVPPQATPEQVPENDIPE QLDSPASQYPMVV</aaseq>

Gene Sequence

<dnaseqindica>3393..4589#2863..3297#2652..2768#2..166#gcggcggattcggctgctggggcccttcgtggaggagctccgggagcggaggcggggggagggggagggggaggaggaggagcgggcgctggcgccgctcgccgacgcgctcgaggcggcgctcgcgctgctccggctcggccgcgaggggagcaggatctccttggtatgtgcgcgcgtgtgggtttcttgattttgttcgattcgtggtcctggctgcctttttgggaggaactattattattattatggattggtgatttgatattatgacctgttcttaggtaaaaataaagtgcagctttagttattaagtttattattgactttagtctcctaaaaaaaattaagattcttggatgcaaaaatatgattctgattcgtctactgtgtatccgtgcttaatttttgcttttataaatcgtgtggactaatattaatatatattgatgtgcagttgtttgaaacacaaaacaaattgtaggggtcgtgattgttaagtgagttttcttttgttttagcataggggctttaggatgatttagttgctgttgcttattaatcgcaaaaaagagagagagaaaggtttccataattttattctgcagctgtgttgtatttgttcagctagatttcttgttgagctgagattgcttcttgttcaatgcgaccaatatatgttcttcttttgtggtgcaattttggtagggtccataagttgtggtctttgggggcgtctgtaacttggttatttcagatcaaactccttgctatttttttttgtggatctactgcgaaacttgtcatctgtaaatgatccatgcattctcatttctcagggcatccatgagtttgtcatagatttgctgtagaataaatgcttggacggattcctccatcggtttctttacttgttgaaacattcaagaatctacttgcccttgccctacatccttcatggttgtactccacatgttattccccatggtaaaagcacggtttgttgtgtggattagttgggagaggcaacggatagacatatgatcatgtctttctccatggtaaaagcaagatttgttgtggattagttgggacaaccatatgatcatgtctttcactttcttgtgtgttgtttgtagtggatattgtctatagctttgaattgttcttttgaggagaggtatgatcttccagtcctgagcaattcaactgctccttttggatcataaatttcacctcttgaatcattatctagccagtttttctgcctaccagtatggtacatcaaatctgaccgattggagtactatgttcttttgtcaagtataactgtattattatctgtatggtatatctaatcataacagacattttcatttttctattttcactgggacaaagaacttgtactaattgtttgctttactttggtcaaatctggttgactgtatctgttgtaactatcaaggcctcaaacccttcatcgagtccgtgttatcaatgggatgctttatgagtgctatgacataatattggtaatcaatagtctttgaacattattttatatcttgatcgctcatacaacaatgatgactatcttgatcgctcatgcactatttttccggattaagaactaacttctggctgggtagttgttgaaattgttcaggagttgaataggccacgtgctttgtcagaaaattaaatagcagcaagtaaaaggttttctggaagctttcatgttaaattctttttataaactagcaaatgaaatggtctgaagaagcatattttcattttggaagtgcaatattgcttagtagagagtaatcaaattgggttctatacctaccacttaatgctcgctgagtacattgacccaaaaatattatttctgagcacaataggtttcattaaacttttatactgaaatacaataagttgccgcaaccagagcagatcaacaaaatttgtcattagagaacttcagatgatcgacatcataactatattgtttgtaggctcaaacattaaggtccccaccagtggatttctgcacccgttgaaagtgtttttcttttttggcctgttggaatgcccatgtacctgatgataggactacctctatgactcaccgactatatcttttacggctgtgcatagggaagggatgaacctacaagttagaaatatggtagtcattgtctagttttctttatgtgactatcaaactcatgtattgattcaacgttttccttcttcaactccattttgatgttattgaaagtgcttgctcattttattcccaagctcagaagcaagggattttcttgattatattggtgtagtttaaatttcaggttggttttcttgctctttgcttcagtacttgaaccacaggcctctgactgtccatcctgtagcttgtaatgtttttatatggtgctcttaatgttggtgttactctatctcttttttcccctgctttacctgtattcttattgacctttgattaccattttgttcttattataaatcattttttataaacatgcttttcgaaacactaattgctgtggatttgtttctgtacaaccacttgtttagctaaggagccttttctttctttcttttcccattctggtttgcaggttcttgagagggacagcgtaatgaaaaagtttcagggagtaattttgcagctggaacaagctctgtgcgacattccgtacaatgaattggatatatcagatgaagttagagagcaggtaacgatgacagcacactgaaaagaattcctcttgctattatcattaagcacttaaatccagcattggagataattatccaaatcctgtccaggttgagttagtgcacgcacagctcaaaagagcaaaagaacggattgatatgcctgacgatgaattctacaatgatctactatctgtatatgacaagaactatgacccaagtgcagaactggctattcttggaagattgtcagaaaagctacacttgatgacaatcaccgatctcacgcaagaatcactcgccttacatgagatggtcgcatccggcggtggtcaggacccaggagaacacattgagagaatgtcaatgctactgaagaagattaaggattttgtgcaaacacagaaccctgacatggggcctcctatggcttccagggtattggattcaaatggggattcaaggcctataaccattcctgacgagttccgatgtccaatttctcttgagctgatgaaggatcctgttatagtgtctacagggcaggtagcaatctctacctctttatttttaagacccaaagcacaatgcaactaaaatagttattttagtataaacattttttatttgttaatttgtagacatatgagcgggcatgcattgagaaatggatagcatcaggccatcatacctgcccaaccacgcaacagaagatgtcaacctcagcattgacgccaaactatgtccttagaagtctcatttcccagtggtgtgaaaccaatgggatggagccaccaaagcgctcaacccagcctaacaagcctacgcctgcatgctcttcgagtgaacgtgctaacatcgatgctctgctatctaagttatgctctccagacactgaggagcagagatcagctgctgcagagcttcgcctccttgcaaagcggaatgcaaacaaccggatttgcattgctgaggcaggtgccattcccttgctattgagtctgctgtcctcatctgacctacggactcaagaacatgcagttactgcccttctgaacctctccatacatgaggacaataaggcaagcatcatatcatctggtgctgtcccaagcatagtccatgttctgaagaatggcagcatggaggcacgggagaatgctgcggccacactttttagtctctcagtgattgatgaatataaagtgacaattggagggatgggggctatccctgcgcttgtagtgctgttaggcgagggtagccagcgggggaagaaggatgcagcagcagctctcttcaacttgtgtatataccaagggaacaagggacgagcgattcgagctggccttgtgccactcatcatggggctggtgaccaaccccacaggagcgctcatggatgaggctatggcaatactctccatactatccagccaccctgagggcaaggcagcgattggggcggcagagcctgtccctgtgcttgtggagatgatcggaagcggaaccccgagaaatcgagagaatgctgcggctgtcatgctacatctgtgcagtggagagcaccatcttgtgcatttagctcgtgcgcaggagtgcgggatcatggtcccgttgcgggagctggctttgaacggcaccgatagggggaagaggaaggctgtgcagctgctcgagcggatgagcagattcctagtccagcaacaagaggaacaggagtcccagtcgcaagcctccgcgcaggtccctcctcaggccacccctgagcaggtcccggaaaatgacatccctgaacaattggacagcccagcgtctcaataccctatggttgtatgaactcgatgatgagcgagtcatcgtcgcaatcctatcaaatgtcggattgagtagcatcctggtcactttgcattctgctcatgattcatggcatgccgaccaattgaggtttttccacaagcttgaactataaggtttccatgcttgtgtgctgaaactcccaggttgtgagaatttgtttaggcagcccaggatgttgagatagatgtgtacagtttcttaaacatgcagctgctatatgtagacaacataatgcaaggttttcccatgtatatcctgaagactgtaataccatatgtaaaagagaagtttcaaatgcggatttgagcagtaaatctgatggctttactact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0570000, RefSeq:Os12g0570000