Os12g0570500

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0570500| Description = Conserved hypothetical protein| Version = NM_001073612.1 GI:115489185 GeneID:4352578| Length = 4794 bp| Definition ...")
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Gene Name

Os12g0570500

Description

Conserved hypothetical protein

Version

NM_001073612.1 GI:115489185 GeneID:4352578

Length

4794 bp

Definition

Oryza sativa Japonica Group Os12g0570500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23698156..23702949

Sequence Coding Region

23699083..23699227,23699448..23699500,23699792..23701139,23701219..23701389,23701737..23702596

Expression

GEO Profiles:Os12g0570500

Genome Context

<gbrowseImage1> name=NC_008405:23698156..23702949 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:23698156..23702949 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcggagagcaagcggttcgatacacagagcccaggctgccttgaaggcctgttcaacttccttgccctgaaccagcggttgcaaatgccgaaggcgattgcgtaccgaaagcacaatgaaggaagtagtaatacacttagagtaaaagttccaaagcccaaaaaccgctcggagaacgatgagtctgttccgaaggggactaattctccaaaggcaaaggtcggcacatttatatggaggacactaatgttcaagaagaaaacactcaagaaagatcaaaagaagagcgactcaccagccaactccccatcatcatcacgtttgacacgctccagatcaattcatcattcaaaatgctttgaatatgtggttccagatgagctggcttctcaataccataccatgattgaatcaagctccaatgaggtggattcatttcacagtgcaccaccgttggtgcaggagagtcctaaagttcccaattttcaagagtcatgcaaatcttctggtgccaaacatagtttcaatgcagaagcaccctgtgaaactgtacctcagagcagtaatgatgaaactgaagccgcctctaagcagaagagtcgtgatgctgcaacacatcactcgaaggagttcatggatttccttgaactgttcaatgcgcacagggagctatttctcaaaattcttcatgatccttcattattagtaccattggaaaaccaagatcaagaagcttcctccagcggtgcagtgccactgaacaaatcagattcgttcccaaggccaggaggatcatcagggaaacgtaaccctatatttgatcggaatgacagtgagaacaatagaaggtcagaaatccaaaagtcaccgtctaggttgaaatctgacattgaaactgctaaagttattggtacaagaatgcctgatggtgttgaaggctcatcggtttcactcacagaatcaaaaagcctgaggaaatctggaaccacttcaaatcgttttaaagttattcgtaaaaagattaaagctgctgtaaaggagaaccggaaagagcttgctcggattaccaaggatggagtttttcataaactgccatatggacaaaagatggctgggttcatgaagagtccctccacagacaagtatgtccaggaggagaaacaaatgcgaaaatcatactccattgcagaatcaatagacaagtattcaacactctatgaatcaatatcaagggaccccaagatttctccagaaagaccaagtacaatgtttgaaggtgatgcaaagttgaaagacaagaagccaccactttctatgaaaagaatagcttctcttccagaaatgagattatattcacctcagcgagatgttttatctgaagtttcagattcccagattgtgcccaagactcacgatctggaatctggttgcttctcttcacaacaaactgatcccttcagcatctgtacagacggaagtttctaccctgacgatattacagaaagaacagcagatatttacagcgaacataattatggagaaagtgctttacttggctcactggaagaggatttgcgcagtatacttcgaagtccaagtttaccttctgtggctcaatctttctcccatcgccgcatcaatagtttaccttcttttgatcgttctttcttccaagatcgtgtcactaatgttaccgagcattctatagcagattcagagccgacgtttgaacatatgcagcttgaggatgatgactggttggtgaagccacctcatcctccaggaccatatgatgctagtttgaaggatgatgagtggttggttaggccacttaagtcctcaggtgttgacactattgatcatgaggatgaagagtggttggtcagtacatcgcagctgcccggtggcaatgctgctgatttcgaggatgaagagtggctggtcaagccagtgcagtcgtcgagtgccgatgctttggattcagagttccagtttatacatgaatttgctgaagatgcaggttccttgcacatttatgttaatgacaagaatgaagccgatttccattatgtcaaggacatactcaaaaaatccggattcagctgcggggaggccgactggtatgcttccaatcagccactcagcccagtgatatttgaggaagcagaattctcgtgccaggaaacatacaccgcgaatgatgacccccacagtgtcgtcaggcgcatgcttctgttcgatctcatcaacgaggtcctgatggatatctatgattcttccttggtcaccggcccatggcactcgcgcttcgactcgcgtaccaggccgatacccatggggtctcatgtcctaggggaggtgtgggggaaggtgagctacaacctgagcctgcaatggaagccggacctgacagtggaggacgttgtggcgcatgatgtcatgatgaaggacaggtggatgaaccttgtgtatgacgcggagtgtcttgcgctggacctggaggatatggtggtggatgaccttctggatgacattgttcttcagatagtgttgatttccattgacgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MMAESKRFDTQSPGCLEGLFNFLALNQRLQMPKAIAYRKHNEGS SNTLRVKVPKPKNRSENDESVPKGTNSPKAKVGTFIWRTLMFKKKTLKKDQKKSDSPA NSPSSSRLTRSRSIHHSKCFEYVVPDELASQYHTMIESSSNEVDSFHSAPPLVQESPK VPNFQESCKSSGAKHSFNAEAPCETVPQSSNDETEAASKQKSRDAATHHSKEFMDFLE LFNAHRELFLKILHDPSLLVPLENQDQEASSSGAVPLNKSDSFPRPGGSSGKRNPIFD RNDSENNRRSEIQKSPSRLKSDIETAKVIGTRMPDGVEGSSVSLTESKSLRKSGTTSN RFKVIRKKIKAAVKENRKELARITKDGVFHKLPYGQKMAGFMKSPSTDKYVQEEKQMR KSYSIAESIDKYSTLYESISRDPKISPERPSTMFEGDAKLKDKKPPLSMKRIASLPEM RLYSPQRDVLSEVSDSQIVPKTHDLESGCFSSQQTDPFSICTDGSFYPDDITERTADI YSEHNYGESALLGSLEEDLRSILRSPSLPSVAQSFSHRRINSLPSFDRSFFQDRVTNV TEHSIADSEPTFEHMQLEDDDWLVKPPHPPGPYDASLKDDEWLVRPLKSSGVDTIDHE DEEWLVSTSQLPGGNAADFEDEEWLVKPVQSSSADALDSEFQFIHEFAEDAGSLHIYV NDKNEADFHYVKDILKKSGFSCGEADWYASNQPLSPVIFEEAEFSCQETYTANDDPHS VVRRMLLFDLINEVLMDIYDSSLVTGPWHSRFDSRTRPIPMGSHVLGEVWGKVSYNLS LQWKPDLTVEDVVAHDVMMKDRWMNLVYDAECLALDLEDMVVDDLLDDIVLQIVLISI DA</aaseq>

Gene Sequence

<dnaseqindica>928..1072#1293..1345#1637..2984#3064..3234#3582..4441#gagagagagagagagagagagagagaggcattagctcatggaggaggaggggaggaggagctccatttccccttttgttcccctgcgcattccaagaagagagcaatctttctctctcccctggtacgatctgttcctgtggctctccctcccttttttttcttggtgtaataggggcccaaatctttgttcttgttcttgccatgtgatttctggccttgaatctttagtgctaaccggttagggattgtgtgatgtttcgattgcatttggtcctgtggtgtctcatccttgaaagtttagaatctggtttatggatggatcaacgcttgggtgatattggaagctgcagaattattctttccccacaaattactcataataaatgtatatctataatctaagatgaaaccccaagattcactgcttttgttccaggagaaaatgtatattggtgcatgctgtgctgcatgatttccatggaatatatattgccttgctatgttaaaactaaaggttaacatttttatttttgagaaacttaaagattgacatttgaattcatgcatctaagtcttggaaacataatggatatcatggttctaaaaatcagtaaataatggatatcatggttctaaaaatcgataagcattattcagtattcactaatcaccctgatggtagtgagcatacggtgtagtcatcaattatactgtaagttggtaacagccgcctgttccttgtatgcaacctaatatacaccctattagacgcgttttagagcatttacggttattgacataatctctagtctcataacttcttatgtgtaatgggctggaatgcccaataatattctcaggttcagactagctgcagggttcaaggacttaatttacctatacattgtcgtcaggtttgtctggaatgatggcggagagcaagcggttcgatacacagagcccaggctgccttgaaggcctgttcaacttccttgccctgaaccagcggttgcaaatgccgaaggcgattgcgtaccgaaagcacaatgaaggaagtagtaatacacttagtaaggttctacatgattctatcagcattttcacagtttggagaacttagcatgtcttttcaaggtttcagataggagctcagtgcctcagtgtacattttactttgctgttcataacttcatacgtgaaagatgatcgcagctaactttgataacaatgtgcacatctctatattggttgtgtaaagtaatgtattccattgtttttatgcctaagcaggagtaaaagttccaaagcccaaaaaccgctcggagaacgatgagtctgttccggtatgtacttgatttgcatatctttttatgttacgggcaaaataagaagcctcggtagatatgaactggtgattaactggtgttttccatattatcaatatattagcacagtagaaaaatcataaacatggttcaattggcactttctcaatctttgggaacctcagaaccagccctgatgtttttcaactcaccattttcgtgacgataagcatgactgggttatctataacaagttctcatgtacataagactactataaactgactgttgatctatcctaattctcagaaggggactaattctccaaaggcaaaggtcggcacatttatatggaggacactaatgttcaagaagaaaacactcaagaaagatcaaaagaagagcgactcaccagccaactccccatcatcatcacgtttgacacgctccagatcaattcatcattcaaaatgctttgaatatgtggttccagatgagctggcttctcaataccataccatgattgaatcaagctccaatgaggtggattcatttcacagtgcaccaccgttggtgcaggagagtcctaaagttcccaattttcaagagtcatgcaaatcttctggtgccaaacatagtttcaatgcagaagcaccctgtgaaactgtacctcagagcagtaatgatgaaactgaagccgcctctaagcagaagagtcgtgatgctgcaacacatcactcgaaggagttcatggatttccttgaactgttcaatgcgcacagggagctatttctcaaaattcttcatgatccttcattattagtaccattggaaaaccaagatcaagaagcttcctccagcggtgcagtgccactgaacaaatcagattcgttcccaaggccaggaggatcatcagggaaacgtaaccctatatttgatcggaatgacagtgagaacaatagaaggtcagaaatccaaaagtcaccgtctaggttgaaatctgacattgaaactgctaaagttattggtacaagaatgcctgatggtgttgaaggctcatcggtttcactcacagaatcaaaaagcctgaggaaatctggaaccacttcaaatcgttttaaagttattcgtaaaaagattaaagctgctgtaaaggagaaccggaaagagcttgctcggattaccaaggatggagtttttcataaactgccatatggacaaaagatggctgggttcatgaagagtccctccacagacaagtatgtccaggaggagaaacaaatgcgaaaatcatactccattgcagaatcaatagacaagtattcaacactctatgaatcaatatcaagggaccccaagatttctccagaaagaccaagtacaatgtttgaaggtgatgcaaagttgaaagacaagaagccaccactttctatgaaaagaatagcttctcttccagaaatgagattatattcacctcagcgagatgttttatctgaagtttcagattcccagattgtgcccaagactcacgatctggaatctggttgcttctcttcacaacaaactgatcccttcagcatctgtacagacggaagtttctaccctgacgatattacagaaagaacagcagatatttacagcgaacataattatggaggtaggaaggaataaataaatagctaaggggaacttccatagaatataagcttaaatttgttccttttcttcttttacagaaagtgctttacttggctcactggaagaggatttgcgcagtatacttcgaagtccaagtttaccttctgtggctcaatctttctcccatcgccgcatcaatagtttaccttcttttgatcgttctttcttccaagatcgtgtcactaatgttaccgagcattctatagcaggtcaaggtttactgaaatcaaattttaaatttttactatacaatgtgcaagctagtagtagaataatgatctatttcaacatttaggtataggtgcaaatgagctagttccaagttgagctagacttcacattatagatcatcatttattttgtatattgtaaataagaacctagagcttttgctgagcttcactttttatggaaagagtactcttttcctcatcttatttaccatatcatgattaaactcaaatgtttgtagcttgcatgtacctatactatcactgttgagacttctagtttcttcagaaggactaatgttgttctattcttggagcaacttcagattcagagccgacgtttgaacatatgcagcttgaggatgatgactggttggtgaagccacctcatcctccaggaccatatgatgctagtttgaaggatgatgagtggttggttaggccacttaagtcctcaggtgttgacactattgatcatgaggatgaagagtggttggtcagtacatcgcagctgcccggtggcaatgctgctgatttcgaggatgaagagtggctggtcaagccagtgcagtcgtcgagtgccgatgctttggattcagagttccagtttatacatgaatttgctgaagatgcaggttccttgcacatttatgttaatgacaagaatgaagccgatttccattatgtcaaggacatactcaaaaaatccggattcagctgcggggaggccgactggtatgcttccaatcagccactcagcccagtgatatttgaggaagcagaattctcgtgccaggaaacatacaccgcgaatgatgacccccacagtgtcgtcaggcgcatgcttctgttcgatctcatcaacgaggtcctgatggatatctatgattcttccttggtcaccggcccatggcactcgcgcttcgactcgcgtaccaggccgatacccatggggtctcatgtcctaggggaggtgtgggggaaggtgagctacaacctgagcctgcaatggaagccggacctgacagtggaggacgttgtggcgcatgatgtcatgatgaaggacaggtggatgaaccttgtgtatgacgcggagtgtcttgcgctggacctggaggatatggtggtggatgaccttctggatgacattgttcttcagatagtgttgatttccattgacgcgtaatgatgaatgataccatgatcctgaagattttttcccttatcagataggtggctcactgttctagcactgtgttaataaatgagtgcacttcctgggcagatcattataccagaaatgcagacatgacaaatgtagtatagtgtagatattagcagtgcatagatattgctagacatagaaaaagtagaatagacaggaaatagcttagcagatcactgatgagtgtaatatttgacagcaaatctttcaggtatgcttaatttgtacttgtactatatacattcaatttgtaaaaaaaaacataataatatctctatagtcaatattgatatggactctttaactttccgggt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0570500, RefSeq:Os12g0570500