Os12g0576900

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Revision as of 10:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0576900| Description = Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1)| Version = NM_0010736...")
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Gene Name

Os12g0576900

Description

Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1)

Version

NM_001073643.1 GI:115489247 GeneID:4352615

Length

5688 bp

Definition

Oryza sativa Japonica Group Os12g0576900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24027546..24033233

Sequence Coding Region

24027857..24028006,24028081..24028218,24028311..24028442,24028907..24029026,24029954..24030030
,24030113..24030479,24030819..24031952

Expression

GEO Profiles:Os12g0576900

Genome Context

<gbrowseImage1> name=NC_008405:24027546..24033233 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24027546..24033233 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacaagatgatgtatcctagctggaatgacatttcagtgtacatatctgagtattggtctgttataattgctacagtcatttttgcatctgttactggtgtgacaatttattatactgtcaatcaattgaacaaaaacatcagcttgagtttgatgaaagctatcagagctagggcaaggaagtacaagaaattgaaagataaggtccctgcctcttcccacatttggagaaaagaacttggctctcgtagtaaaggtctgaaatgctgtgtatgcttgaagtctgtttcatctccgcagtatatggggggagttatccatcagtgtgatatttgtggtgccactgcacatcctagttgctcaggaaatgcgcacaaagattgcaaatgtgtttctatggttggttttgaacatgtcattcatcagtgggctgtacagtggattgacacatcggatcgctctgaggaggattctttctgctgctattgtgatgaatcttgcaatggagctttcctcgcaggttctccaatttggtactgtatgtggtgccaacggctagtgcatgttgattgtcacaacaacctatctatagaaactggtgatatctgtgacttgggccccttgaagcggctaatattgtcacctctttgtgttaaggagctccattggacaggtgcagcaggacttatcagttctataacacatggggctaatgaattggcttccaatgtccgagagaggatcaggagtcgcggtaaaaagtacagaaagggtaccatttctgttgattcagatagctctggtactattgacccgccatctgatattgaaggagattcacaagaaacaaacaatgcagctaaaaggagagaggatcatgccaatggtgaacttcctgaagtacatgaaagctctgaatcagagaatgataaacagctgttgacagaaaacaaaactagcataccgaacggccaacatgaggattcacacgtacacaataatcagaaatatgaaatcgtggatgtgccttctgattctaggccattgctagtgtttattaacaagagaagtggagcacagtgtggtgattcactgagacaacgtttgcagatccttcttaatcctatccaggtttttgagctgggtaaacagcaaggaccagaagttggtttgactttgtttaggaaggtaccccacttcagagttcttgtttgtggtggagatggcaccgttgcttgggtcctggatgccattgagaaacagaagtttgaagctccaccacctgtggccatccttccagctggtactggtaatgatcttgccagggttttgtcttggggtggtggtctcggaattgttgagaaacagggaggtctgttctctgttttaaaagatgtcgagcatgcagcagttactgttcttgatagatggaagatcacaataaaagacaaccaagggaagcttatgtcacaaccaaaatatatgaacaactactttggggttggctgtgatgcaaaggttgctttagatatccacaatctgagggaggaaaaccctgaacgtttttatagtcagtttatgaacaaggtgctttatgcaaaagagggagcaaagaatatgatggataacacatttgattattttccatgggatgtcaagcttgagatagatggatccaaaattaatattcctcagagctacatgggaggagttgacctgtggaagaacgaggatgatgtttctgacaatttccaccctcagtcaatgcatgacaagatgctagaagtagttagcttcactggaatgctgcatcttggaaggctgcaggtagggctttctcgcgcgcagaggttagctcaaggtcatcatataaagatcgagatcaaaactaaaatgcccattcaagtcgatggagagccttggtcgcaggatccatgcaccatagtagtttcacatcactgccaggctttcatgctgaagagagtctccgaagaacctatcggccatgcggcctccataatggccgacgttctggaaaacgccgagaataacggcatcatcacagcgtcgcagaagaggaccctcctccacgaaatagcttctaggcttttgtag</cdnaseq>

Protein Sequence

<aaseq>MYKMMYPSWNDISVYISEYWSVIIATVIFASVTGVTIYYTVNQL NKNISLSLMKAIRARARKYKKLKDKVPASSHIWRKELGSRSKGLKCCVCLKSVSSPQY MGGVIHQCDICGATAHPSCSGNAHKDCKCVSMVGFEHVIHQWAVQWIDTSDRSEEDSF CCYCDESCNGAFLAGSPIWYCMWCQRLVHVDCHNNLSIETGDICDLGPLKRLILSPLC VKELHWTGAAGLISSITHGANELASNVRERIRSRGKKYRKGTISVDSDSSGTIDPPSD IEGDSQETNNAAKRREDHANGELPEVHESSESENDKQLLTENKTSIPNGQHEDSHVHN NQKYEIVDVPSDSRPLLVFINKRSGAQCGDSLRQRLQILLNPIQVFELGKQQGPEVGL TLFRKVPHFRVLVCGGDGTVAWVLDAIEKQKFEAPPPVAILPAGTGNDLARVLSWGGG LGIVEKQGGLFSVLKDVEHAAVTVLDRWKITIKDNQGKLMSQPKYMNNYFGVGCDAKV ALDIHNLREENPERFYSQFMNKVLYAKEGAKNMMDNTFDYFPWDVKLEIDGSKINIPQ SYMGGVDLWKNEDDVSDNFHPQSMHDKMLEVVSFTGMLHLGRLQVGLSRAQRLAQGHH IKIEIKTKMPIQVDGEPWSQDPCTIVVSHHCQAFMLKRVSEEPIGHAASIMADVLENA ENNGIITASQKRTLLHEIASRLL</aaseq>

Gene Sequence

<dnaseqindica>5228..5377#5016..5153#4792..4923#4208..4327#3204..3280#2755..3121#1282..2415#accttaattaatcgattaattaatcaattaatttaattacagcatctgcaactttcgccttcttcccgcagcatcgaagcggaggaggggaaaggaaggcgagagagagagagagagagaggagaggagaggagcgcgttgcgaaggctctcgaatcgagcgcggcaatgcgagagagcggttcttgagcccccgcgattcgattcttccggtgcaaaggtgagatctctcggttctacggtttgcgtttttcttgttttatttacgttttggaggaagaaagaatcggattcttttcgatggatggtgcgatctgcttgctagggttttcttggatgatttgggatggatgcgtgcgcgtgtaagcgatggttaggggggcgttaggatgtgattatatgctcgggatggggggagtggtagtggaggaggaggctctgattagggttcttgcttaagccgagtgggttctcggcgaaaggttagtgttctggggttagttttcttaccttcgttaggattgtagcgagattttgagctgttgaacaaacgcttaaaaattcagagatcacactaccctcagaaatggaacatactgctgaagtgagaaaccggctctctctccaaccacagaatcacagattagtcatgttcatttttttgtccatcttgtttgaatccggtacaaaccttgagaccgtgttcattctgttaaaacatggttcaaatctgtgtatcgtttgggtttagaaatattagaaaatcctaaatctgtttatttcagttgaagaaaataaatgtgaaagttcaattccttttcaaaatttggaatataaacacagataagcatgtacaagaatctgagttattgaaaatgaacatgcattttttaacgtatttcagacatcagtccatacctgtaattctttaaaagctaggctgccaaaaagattttagttgcttttcataaatcacataatctctgggtgctttcagccataagatggaaaggctgttttccaagaattctaagcccataaaaagtgggtgttaatttttgcacattataatcagcagtaacactacaagtgaagtaacagtcaacatgttaacgatacatttatggccgaataccaagttttgcggtgttatcagtacatatctaactactgttgtatatttagccagaattttttttttaacaacatagaatcacctgttctatgccaatgaatttctcaaaattaacttctgctcatcatcatatgaccacattgcagaatgtacaagatgatgtatcctagctggaatgacatttcagtgtacatatctgagtattggtctgttataattgctacagtcatttttgcatctgttactggtgtgacaatttattatactgtcaatcaattgaacaaaaacatcagcttgagtttgatgaaagctatcagagctagggcaaggaagtacaagaaattgaaagataaggtccctgcctcttcccacatttggagaaaagaacttggctctcgtagtaaaggtctgaaatgctgtgtatgcttgaagtctgtttcatctccgcagtatatggggggagttatccatcagtgtgatatttgtggtgccactgcacatcctagttgctcaggaaatgcgcacaaagattgcaaatgtgtttctatggttggttttgaacatgtcattcatcagtgggctgtacagtggattgacacatcggatcgctctgaggaggattctttctgctgctattgtgatgaatcttgcaatggagctttcctcgcaggttctccaatttggtactgtatgtggtgccaacggctagtgcatgttgattgtcacaacaacctatctatagaaactggtgatatctgtgacttgggccccttgaagcggctaatattgtcacctctttgtgttaaggagctccattggacaggtgcagcaggacttatcagttctataacacatggggctaatgaattggcttccaatgtccgagagaggatcaggagtcgcggtaaaaagtacagaaagggtaccatttctgttgattcagatagctctggtactattgacccgccatctgatattgaaggagattcacaagaaacaaacaatgcagctaaaaggagagaggatcatgccaatggtgaacttcctgaagtacatgaaagctctgaatcagagaatgataaacagctgttgacagaaaacaaaactagcataccgaacggccaacatgaggattcacacgtacacaataatcagaaatatgaaatcgtggatgtgccttctgattctaggccattgctagtgtttattaacaagagaagtggagcacagtgtggtgattcactgagacaacgtttgcagatccttcttaatcctatccaggttgggaagcaagtagctacttaaaatcttttatcagcttcaaactatgcgtactctttgaattttctattacatatgcctcctcaatctttgttgctgtgtagtagactttcataagtcacatatccttgaacttttttttttgggttgggtgtcccatctttgatttatctaaaacgctctgctatgtttctgtccacttcctggcacctggctgtagttagattagagctcttagtgcaaggtgcctacttgagcccacaaacatcggttaatgctctacctgatttttatgataaaccttgagtccatttttatgatactatctgatttttacaggtttttgagctgggtaaacagcaaggaccagaagttggtttgactttgtttaggaaggtaccccacttcagagttcttgtttgtggtggagatggcaccgttgcttgggtcctggatgccattgagaaacagaagtttgaagctccaccacctgtggccatccttccagctggtactggtaatgatcttgccagggttttgtcttggggtggtggtctcggaattgttgagaaacagggaggtctgttctctgttttaaaagatgtcgagcatgcagcagttactgttcttgatagatggaagatcacaataaaagacaaccaagggaagcttatgtcacaaccaaaatatatgaacaactactttggtatgtccatgcaacttcttagctttgattctcaaacgattatttcatagactgatgaaccttttatactgatgttcttcaggggttggctgtgatgcaaaggttgctttagatatccacaatctgagggaggaaaaccctgaacgtttttatagtcaggtaaacccagcttgttcctacgaagtcacttctccttcttattctcatatgcaccatttacttctccttgtttgactggtcagttcaatatttttccagaagaacaatatatttggggaaccttaggtttttaggtaatggaacaaatattctgtccgctgccatagtgatgtatgaagtagaaaatgtcaactcgacacgaagcatattgttatttgctaactctatgtgtgcttgttgaataactccatgacagcccgttccaaagtgcagctcatcacaatagttgtgtgccacttggggaaccttaggtgctgtatcattgttgaacgcgcagcatcttctctgtttagaagtgttagtatgacctatggtagaagagtttgaaatatatcacatgcaccatttactgtctgatggcacactgatcttaaaaagaaacatgaagtgcttgtgtagttgaggaaactgtgcaagaatgcaagatagaccttacaggcatatatgttggcacacatatctattgcaccaataaaatccttactgtggtactgtactctaaatctgttgaaagaaaataattaatgaggaatcatgagaccaagattttcattatgttgagattcacaaggattatttttttacatactactctctctgttcccaaaaaactaacttctggttatgtagtagtttctttctaggatggagggagtatattgctagtttgtggaaaaatgagcttttttattctcatatgtttattttatttttctttgatcacttgataaacttaaattccccaataataaacatcaaatggtaatcagattcacacattccatgcctatctgatttctatcttcttattctgcgctgtgtttgcaaatctggttctgacagtaatggtatacaatttgtttgtagtttatgaacaaggtgctttatgcaaaagagggagcaaagaatatgatggataacacatttgattattttccatgggatgtcaagcttgagatagatggatccaaaattaatattcctcaggtaaagtgcatcaaattgctactgttcttgctttcccctttttcttctctcattaagctaataattccgcctgtcttcaaggtaaaatgtgatgcccaagtgcacatgatattgataaattatttgaatgtaagatagttactgcagttttatacttgatcgatcatagtgtccagtgttcacaactagtaatcttttagtgtaaagtagaagcatgtcctgattataccatgtaggggtgttcatctctggtttcttcaatccgttgaaaaccagaggtggacaagattatgccgtaattagcgatgatggtgactgagcacactgaaaaattgcctacggtcggtttgagcagttcctaggaaaaaaagaacataatgtacagccctaataccatgtaacatccctaaacttttgtttttccactgaaggactctgaaggtatccttgttgccaatattcagagctacatgggaggagttgacctgtggaagaacgaggatgatgtttctgacaatttccaccctcagtcaatgcatgacaagatgctagaagtagttagcttcactggaatgctgcatcttggaaggctgcaggtatggatgaatatcttgattattaaacttcctggtctttgacattttttttccatgtggaatcacctctggataacataacctcgctgtaggtagggctttctcgcgcgcagaggttagctcaaggtcatcatataaagatcgagatcaaaactaaaatgcccattcaagtcgatggagagccttggtcgcaggatccatgcaccatagtagtttcacatcactgccaggttcttctcatcccctttacacatgttaccgcttgccattctccacacttgctcttacgcccccatttttgaaggctttcatgctgaagagagtctccgaagaacctatcggccatgcggcctccataatggccgacgttctggaaaacgccgagaataacggcatcatcacagcgtcgcagaagaggaccctcctccacgaaatagcttctaggcttttgtagggcatacttccacgttgattggaggcttctttctgagcccctgccaaactggacatgatcatttgtacatacaagcatgattgtttttccccactttgattgtgcttgtgtatagtttgtaaattttttgtagagctcgtgagatgagagcataggtgcttagagcactacctggacataactggaaagcagtggctttagagctgagaaatgtgatacccactgcaacccagttgcctggcattctggcacgcttgctaaagcagtgataccactacaccagtttattattattccagatttccagtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0576900, RefSeq:Os12g0576900