Os12g0580600

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0580600| Description = Conserved hypothetical protein| Version = NM_001073663.1 GI:115489287 GeneID:4352636| Length = 1552 bp| Definition ...")
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Gene Name

Os12g0580600

Description

Conserved hypothetical protein

Version

NM_001073663.1 GI:115489287 GeneID:4352636

Length

1552 bp

Definition

Oryza sativa Japonica Group Os12g0580600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24256938..24258489

Sequence Coding Region

24257448..24257546,24257672..24258181

Expression

GEO Profiles:Os12g0580600

Genome Context

<gbrowseImage1> name=NC_008405:24256938..24258489 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24256938..24258489 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctgaagcagatgatgaggatggacaagcttgtgaggcaatgtgacatggaggtgatgaagatggccatgctcaagcatgaggagaccttcaggcagcaggttcatgagctgcatcgcctgtaccgaattcagaggcagctgatgagcgacctgaccatggccgagctgagctccggccaccgccgccggcagcctcgccggagcagcaagcaacctcgccgcgcgctgaacctgcagctccccgccgacgagtacatcgtcagcgccgacgccgccgacgacaacgacgacacggccgagctggacctcactctcgccgtcggcggcggccgcagctcccgcaagtgcaacgccgccattgccgccgccgccgccgccgcaggtggctcctcccccttcgcctccgactgctccggcagcggcctctcgtcgtcgccgtcgtcggccgagtactccgacggcgccgccatgttcctccacgcgccgccgcccatgccgccgccgtgccagcgtgcaatggcgttcgacctcgccatgggcgacgccatgaagcagcagcagtcgccatggctggttcagtgccagtatctcagcctcaggatgacatga</cdnaseq>

Protein Sequence

<aaseq>LKQMMRMDKLVRQCDMEVMKMAMLKHEETFRQQVHELHRLYRIQ RQLMSDLTMAELSSGHRRRQPRRSSKQPRRALNLQLPADEYIVSADAADDNDDTAELD LTLAVGGGRSSRKCNAAIAAAAAAAGGSSPFASDCSGSGLSSSPSSAEYSDGAAMFLH APPPMPPPCQRAMAFDLAMGDAMKQQQSPWLVQCQYLSLRMT</aaseq>

Gene Sequence

<dnaseqindica>511..609#735..1244#atttccagcttcacacattcaccagcctcactctcacaactcatactcctccttctgaacctatcttgtttgtcctctggaagttgagtagaggaagagaggaacagacaacagaaacaagcaagcatcttggtggttgttttggatacatatacaaggttagttagttggttagttacttgttctttgtggtagaattagcatccttgtctgaaatgttgtttgtgtcactcagagattgttctgatgacatcatcatgtttcttgatctgagctcctgctctcaaagttcagttttttgttcatcttgctactagctcttttgatgtaatttatcatttctgaagtctgaaccattaggatcaatgaaaatgaagttttttttaaagtacttaatggtatctttgcttcacatttcagcagggtgcaagtgcaagaattggtgatctgaatcctgaatcaaagttgagggaatcactaggatcaatcaatcaattccaagaggcttagctgaagcagatgatgaggatggacaagcttgtgaggcaatgtgacatggaggtgatgaagatggccatgctcaagcatgaggagaccttcaggcagcaggtaaatctcactgaaattaatcctatcaactacttactactagtagttaattactggccattgcaaatttcttgaatcctacatatgaactacttctaattaagtttcaattaattattaatcaggttcatgagctgcatcgcctgtaccgaattcagaggcagctgatgagcgacctgaccatggccgagctgagctccggccaccgccgccggcagcctcgccggagcagcaagcaacctcgccgcgcgctgaacctgcagctccccgccgacgagtacatcgtcagcgccgacgccgccgacgacaacgacgacacggccgagctggacctcactctcgccgtcggcggcggccgcagctcccgcaagtgcaacgccgccattgccgccgccgccgccgccgcaggtggctcctcccccttcgcctccgactgctccggcagcggcctctcgtcgtcgccgtcgtcggccgagtactccgacggcgccgccatgttcctccacgcgccgccgcccatgccgccgccgtgccagcgtgcaatggcgttcgacctcgccatgggcgacgccatgaagcagcagcagtcgccatggctggttcagtgccagtatctcagcctcaggatgacatgaacagcaagagcaagctcaagctcaagctcaagctgtccatgatcacactgtgctactactactctagcttaattatcttgtgtttgtagaagaagaagagaagaagaacaagaagaagctagccactagcttaatcatttcctctcccactgttaattaatcaattatttgttctagctaggtgatcagtgcagtttgggcaggggggattaagtcctaatcctgaattcctgatcccaaagtgtccattgatcatcatttgatcgatcttggctaattaatgagtgcatgctgattgatttgtgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0580600, RefSeq:Os12g0580600