Os12g0582800

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0582800| Description = Protein of unknown function DUF221 domain containing protein| Version = NM_001073674.1 GI:115489309 GeneID:4352647| ...")
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Gene Name

Os12g0582800

Description

Protein of unknown function DUF221 domain containing protein

Version

NM_001073674.1 GI:115489309 GeneID:4352647

Length

6192 bp

Definition

Oryza sativa Japonica Group Os12g0582800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24395151..24401342

Sequence Coding Region

24395262..24395497,24395605..24395760,24396469..24396532,24396820..24397029,24397760..24397948
,24398126..24398424,24398657..24398933,24399127..24399399,24400398..24400631
,24400789..24400938

Expression

GEO Profiles:Os12g0582800

Genome Context

<gbrowseImage1> name=NC_008405:24395151..24401342 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24395151..24401342 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattctgtcggcgctcgcgacttcggtggggatcaacctggggctgacggtgctcctcgcggcggcgtacacgctgctccggcggcgcccgccgtacgtcgccgtgtactcgccgcggcggccgtacgcgccgccggagccgtggctgcccgcggcgtggcgccgcaccgaggccgacgtccacgccgccgccgggctcgacggcgtcgtcttcctccgcatcttcgtcttcagcattagggtgttcgcggcggcggcggtggtgggggtgggagtgctgatgccggtgaacttcatgggggaccagctgcggcagattgacttctccgatctgcccaacaagtccgtcgatctcttcagcgtctccaacgtgcaggatggctccaacaaattgtggctccacttttcggctgtgtacatcataactggaattacatgctacctcctttattatgaatacaaatatatttctggcaagaggctcgaatattttatgacatcaaaaccactacctcagcatttcacagttctagttcgagctatacctgtaaccaatggtgtgtctgtgagtgatgctgttgataagttcttcaaagagtaccattcatctacctacttgtcacacactgttgttcatcaaactggcaaactccgccgccttcttaatgacgctgagaatatttgcacaaagcttgccaacttgaagtctgtacggcgtacttctggagatcctccaggaaaatttcttggaatatttggcagaaatgatcttgttgggaaatatcagaaaaggctggaggacctagaagaaaatgttagaatggaacaatcagacactactaggagcagacaggaagttcccgctgcttttgtgtcattcagatctcgatatggtgctgcaaatgctatttacataagacaatcagacaagcctactgagtggcagactgagcatgctcctgatccccatgacgtttattggcctttcttttcaacatcattcatggacagatggatatccaagtttgtagtctctgtagcttctattctcctgatactcgtctttctcctagtttcggcatttgttcaaggactcacctatatggaacagctagagacatggttgcctttcctgagaaatatactggaaatagctgttgtcagtcagttggttacaggatatcttcccagtgtcattcttcactttctttcctcttatgtgccctctataatgaagctgttttcaacaatgcaaggattcatctctgttagtgggattgagagaagtgcttgcaacaaaatgcttcggtttacaatatggagtgtgttctttgcaaatgttcttactggctcagtacttggtcaactcgagatattccttgatccgaaggaaatccctaaaaggcttgcagttgttgtaccagcacaggcctctttctttattacatatgttgtgacatcttggacaagtatagcatcagaacttactcaaactgctgcccttttattccatttgtggggtagctgtgcaaaatgctgcaagagggatgagtccaaacctccatcaatgcattaccatagtgaaattcctcgggttctcctgtttggacttcttgggctcacatacttcattgtatccccacttatcctcccatttgtactggtttacttctgccttggctacttcatatatcgtaatcagctttttaatgtatattcacccaagtatgacactggtggaagattctggcccattgtgcacgggggaacaatattttctctggtgctgatgcatgttattgcaattggagtatttggattgaagaaacttccccttgcatcaagtttgctggtacctcttccagtgctgacccttctgttcaatgaatactgccggaacagatttttaccgatcttcgaagcatattctactgagtcattgataaagaaagacagagaagaagagagcaaaccagaaatggcagaattcttcagcaatcttgtaaatgcgtactgtgacccggcgatgaaacctatccaacactcctcgaattcagatgaacgcactacacctctattgtcttag</cdnaseq>

Protein Sequence

<aaseq>MILSALATSVGINLGLTVLLAAAYTLLRRRPPYVAVYSPRRPYA PPEPWLPAAWRRTEADVHAAAGLDGVVFLRIFVFSIRVFAAAAVVGVGVLMPVNFMGD QLRQIDFSDLPNKSVDLFSVSNVQDGSNKLWLHFSAVYIITGITCYLLYYEYKYISGK RLEYFMTSKPLPQHFTVLVRAIPVTNGVSVSDAVDKFFKEYHSSTYLSHTVVHQTGKL RRLLNDAENICTKLANLKSVRRTSGDPPGKFLGIFGRNDLVGKYQKRLEDLEENVRME QSDTTRSRQEVPAAFVSFRSRYGAANAIYIRQSDKPTEWQTEHAPDPHDVYWPFFSTS FMDRWISKFVVSVASILLILVFLLVSAFVQGLTYMEQLETWLPFLRNILEIAVVSQLV TGYLPSVILHFLSSYVPSIMKLFSTMQGFISVSGIERSACNKMLRFTIWSVFFANVLT GSVLGQLEIFLDPKEIPKRLAVVVPAQASFFITYVVTSWTSIASELTQTAALLFHLWG SCAKCCKRDESKPPSMHYHSEIPRVLLFGLLGLTYFIVSPLILPFVLVYFCLGYFIYR NQLFNVYSPKYDTGGRFWPIVHGGTIFSLVLMHVIAIGVFGLKKLPLASSLLVPLPVL TLLFNEYCRNRFLPIFEAYSTESLIKKDREEESKPEMAEFFSNLVNAYCDPAMKPIQH SSNSDERTTPLLS</aaseq>

Gene Sequence

<dnaseqindica>112..347#455..610#1319..1382#1670..1879#2610..2798#2976..3274#3507..3783#3977..4249#5248..5481#5639..5788#gtaaaagcatagtgagctctcccgtgccaccgacaggtgggccccacccgcgcggcggaaggttctaggctctccggcgaaggttctggaaggttcgggaggaggggggagatgattctgtcggcgctcgcgacttcggtggggatcaacctggggctgacggtgctcctcgcggcggcgtacacgctgctccggcggcgcccgccgtacgtcgccgtgtactcgccgcggcggccgtacgcgccgccggagccgtggctgcccgcggcgtggcgccgcaccgaggccgacgtccacgccgccgccgggctcgacggcgtcgtcttcctccgcatcttcgtcttcaggtcccgcttccccgctctcctctcctccaatctcggcatacacgctgctcgctttactatgggggatggagattgacgaggtgatgggggattttggtgttgtgcagcattagggtgttcgcggcggcggcggtggtgggggtgggagtgctgatgccggtgaacttcatgggggaccagctgcggcagattgacttctccgatctgcccaacaagtccgtcgatctcttcagcgtctccaacgtgcaggatggctccaacaagtgagctatttcgagcttcctgatgcctaatttttgttcgcggatttagggggttttagtgggttttgtgtgattgttagtgcttcaaggtggatacaattgtttaataataataaattacgtgccagttatagattaaattctcgttttcgtattaggaggatgaatctcttggattgttttaatgaggttgagtattttgtttatgctagtggctattgagatgttcagagtatgcttcactgcacagttttagcttaggattgctcagtttggtgagcactttgatggttttcttttcctggccactagtctatttataaagcatgatttgtttttctcattggttccttatttttctgaaattctaatttgtattttctttgttttgaaggggcaaagtgctaactgcatgaaaaaaaacacagagattcactaattcacctatttgatgctgtctcgagaaaatgcgttgaatctctctcataaaagaaaaatatttcttttagtagtatttagaatttgatgtcggtcatttaaaatccaacggtttcaaacatgggcctgcatgcttaggccttctccatggctccaggctgatgcgaccattttgctagagtgttaagttgatttctgtctggaatttatcttcattattgggctagcaatgcatagcatactcattaccggtggtaatgtggtgaacagattgtggctccacttttcggctgtgtacatcataactggaattacatgctacctcctttattatgtaagtaattgagtattttgcttctttttggctacctactcactgttttcaaactaattcaacattttacttccctctcttatatttgtgctagacctaataatttgatctattttcttgattggatacttcttcagtcaaactcatttgatatttcagttaccataccatgcatgcttgtcagatctggcattcatttatcaaattcttctcgttgaagttctgctttgctgctttcctgttttcacatctttatgtacacaatggtttatgttagctctttgcaggaatacaaatatatttctggcaagaggctcgaatattttatgacatcaaaaccactacctcagcatttcacagttctagttcgagctatacctgtaaccaatggtgtgtctgtgagtgatgctgttgataagttcttcaaagagtaccattcatctacctacttgtcacacactgttgttcatcaaactggcaaactccgccgccttcttgtaagattcgattgttttgctactttctattgcttcagtatggttaacatcctatattttatccatggttccaacaacacttactatatggggtgtctatagattgacttattgcattgggtacatgttgttgtattgaaagtagatagtgataggtttgcaaggcttgcattttgtttcagttataatcaatatgttttgacaacttattagtcctttacttaatttcttgtgactaaaacaactcaccatactggaagttgctattttactttcaacatgtcacttctaactctatgttattagtctgatatatacatctagtgattatgtcgaaaagtagattttagattaaacgtggagtcacagaattgctcctttccattgtttcataaataaaatacagaaagtatctaatatgtttctgcctagacatgtcaaaaaattcaaggggagaatatatacatcagttgtgatcctcatttgaaagttgtccgtatcttatttcacctttcaacacgcagatttattccctttttttttgtcatgcgaacaattttgtttatcctaaatgtatcttaagaaatggtacaccagtagattttcttcatcagctggaaaactaaacagttccatctctacatttagatcaactttataatgtctttgttctatattgcttaatgtaatctccagttccattttgatagttaactccatctctgtccagaatgacgctgagaatatttgcacaaagcttgccaacttgaagtctgtacggcgtacttctggagatcctccaggaaaatttcttggaatatttggcagaaatgatcttgttgggaaatatcagaaaaggctggaggacctagaagaaaatgttagaatggaacaatcagacactactaggagcagacaggtgcatatttctaccaattttggtcttgctcaaaccatgatgtttcaatatctccctatctgtttgttatactgcattggaattagtatttggctctggtgctcatctttcagaaaatttatttataaacatttcaatattttgtcatctgttctgattttctttacatctctttaggaagttcccgctgcttttgtgtcattcagatctcgatatggtgctgcaaatgctatttacataagacaatcagacaagcctactgagtggcagactgagcatgctcctgatccccatgacgtttattggcctttcttttcaacatcattcatggacagatggatatccaagtttgtagtctctgtagcttctattctcctgatactcgtctttctcctagtttcggcatttgttcaaggactcacctatatggaacagctagagacatggttgcctttcctgagaaatatactggaaatgttagtgtttatccatctatttatttttcactactttctgtattttgttatttcagaaaggaatcaccatttcttataaagttccagtttgcagcagtcatgcatttttttggatgcttaatttgggatactaatatttacaaattttaccatgttggttttaatttttctaatgcattgcacaatatgatgggattcactaaccaagctaaaatttatttgattgttgcagagctgttgtcagtcagttggttacaggatatcttcccagtgtcattcttcactttctttcctcttatgtgccctctataatgaagctgttttcaacaatgcaaggattcatctctgttagtgggattgagagaagtgcttgcaacaaaatgcttcggtttacaatatggagtgtgttctttgcaaatgttcttactggctcagtacttggtcaactcgagatattccttgatccgaaggaaatccctaaaaggcttgcagttgttgtaccagcacaggtacagcttgcatttattgttgcctttaaaactgcttagtgagtgaaaaagctctttgttttgtagatattactgtgggcatttcaatgtaaaatctgctttcttaaacaactgtctcttgtgtagtattgtattgatctcttcctcaaccgtgcattgctaaactgtcctttgtttatgctttgctctacaggcctctttctttattacatatgttgtgacatcttggacaagtatagcatcagaacttactcaaactgctgcccttttattccatttgtggggtagctgtgcaaaatgctgcaagagggatgagtccaaacctccatcaatgcattaccatagtgaaattcctcgggttctcctgtttggacttcttgggctcacatacttcattgtatccccacttatcctcccatttgtactggtttacttctgccttggctacttcatatatcgtaatcaggtgagagtgttgcagttcatttatcagtactttataattttctgttcttctactcatggagtctttatgctgtaatatacctggttggaatttggaaggacatattagtacctaaacctgttcgaaatttggatagggactgaccaatttgtttgacacttgcatagtaatttactgaacttggttttgcagactgccagacttggtacttaaaattcacttacaccacaaggtgtagatggaatcaggataacgtgggtccaactataaataactttttcttagaatgtttagcacataatcgtagtgttgtttcctgaaagatgatctagataatctagtgatgtaatttgtaacactcagtctgaaaggcatccaacagttcaagtgttataatgaggactttcttgtgtgcaatgattgcctggtagaacagtagaaattgctttcccgcaagtatttgtcttctttcacatcttgcaaataagattaagtttggttttttaatctcagtgagatataagagaacaaagaacgccctttatatgttcttaagaatttcgagaacttccacagttgatttcatgcgtttgcaacggtcacatcatctataataggtgttgtaaatacttcaggcgtcctatttatccatgcatttggaagctggtatcagtataccatgtattctggttacactggtcctgcaaagattaaacgatgtattatttgttatatgaaaaattgccaaatcaacaccatgcattctaaaagtggattgtttagctggataaatgtgccataccagagaaccatgacacagttaaagtgatatttttccatccatatagtagttaataaggcaccaataattctacattgcatcatagtaatactttaggcccctttagtccgaccaatctggaatttgcacgtgtttaactctgtaaagcattagtttatccgtgtacacttcttaactttgcatagtacaaatgcagctttttaatgtatattcacccaagtatgacactggtggaagattctggcccattgtgcacgggggaacaatattttctctggtgctgatgcatgttattgcaattggagtatttggattgaagaaacttccccttgcatcaagtttgctggtacctcttccagtgctgacccttctgttcaatgaatactgccggaacagatttttaccgatcttcgaagcatattctactgaggtaatgtgtttttcattttgtccaagggtgcaatgtaattctctttgtgcaactatgtatcaaaacgaacaacgcatcattctggtccttttagcttatcacttcgatagttcgattagatataatgtgtattcacgttctacctttcgtgctgcagtcattgataaagaaagacagagaagaagagagcaaaccagaaatggcagaattcttcagcaatcttgtaaatgcgtactgtgacccggcgatgaaacctatccaacactcctcgaattcagatgaacgcactacacctctattgtcttagatccagataagtaatagcttgcagccttactgtcatggcgtgaattttggtttgacaccgataatcaggcatacaacaatacacctgtgcttcttcttgtgatgttactgttgtaaagcattactacatacttgactgtggagttgttgtgcatatttgatttgtacatcttaatttgtgcttactgcgtagagatgaataatgcattgctccttaatgaagtgctgtcaatgcaaacctgtgtgggttgtacttctagatatgtcaaatcacctttatttgttcccttcaaattttgtgtatatggatgttcttttgcttcaacctattcagtaatgagattatttggcagttggaatgatgtgatattagtactgatacattattatcagtttatttgagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0582800, RefSeq:Os12g0582800