Os12g0587200

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0587200| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001073692.1 GI:115489345 GeneID:4352665| ...")
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Gene Name

Os12g0587200

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001073692.1 GI:115489345 GeneID:4352665

Length

3100 bp

Definition

Oryza sativa Japonica Group Os12g0587200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24730424..24733523

Sequence Coding Region

24730514..24732037

Expression

GEO Profiles:Os12g0587200

Genome Context

<gbrowseImage1> name=NC_008405:24730424..24733523 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24730424..24733523 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaaggccggggatcgccggagccggcgggggcggcggactggattgtcctcgacccgtacgtccgctgcagctggcggaggaggcacaagtacgaggaggaggacatcacggcgtccaaggtcggccggacctgcaccggcttccccgtccgcgcctccctccgcgtcgccgacccgcccgccgtctcccgcctctacctccactgccctccccagtggccggccgacctccccgaggtccgctaccccgacgtcatcgccgcccaccgcggctgcatcctcttcgtcgccgccgtccccttcgaggaacccgggttcaacgtcgatgggcactaccccctcgactacttcatctactccgcctccccctcctcgcagccgttgctcacgcggctgccgccttgcttcgtcggcggcttcaccgaccaggaggaggacgagttgtaccagccgtaccaccagcagcggcagcgctacatgtgcagccgagacgtcggcctcctgtgccgcgacggcgacggcgacggcgaggacggccggtcgctcttcactgtggcgcacctcacatccagtgggagcaaggaggtggagctctgtgttgtgcaatcaggggaagcggaggagtggagcatcactcccctgcgtgtccgtcgcgccatgagcatgctcggcctcaacctcggcgagtggaggaccgacgccgtgctccccctccacgaccgcttcctgtgctgggtcgactactaccagggcatcctgctcatcgacgtcctcaaccctggggacgagccacatcaattcagcttcatcccgctccccaaaccggtgagagatggcagcacccgcttgttcagccagtcctactgcgccgacccagttcgctgtgtttgtgttagaggtagtagtgacagtggcttcttcatcaagctggtctgcgtcaccattgccgccaccgcagacaaggatgtataccctcctgctttcaccatcacggcatggactctggtcagcatcgaccaaaagacctgggaactggattttacaatggaagccgccgagttctgggatctttgtgctaattccgtaggtcacacctgtgctcttccgcgtgctgtgccgactttttctcacctgagcttggttgatccaggtgtcgtttccttcctgctcatggaaaagatcgatgatgagttcctgttttggatcgttgagttggacatgacaaataaggtgctgcggtcactgcccaccctctacatccaggtggaagaagaagaagaagatgatgatgaaataaagaaagtgcaagaggtacaaggaccctcccgttgcaaggcctataagagagtctttcacggcgaatacttcttccccagccacttcacctcgtatctgagaaagaatcccatccaaaggttcgatatgtgtcccttctgtttggttatattctttaggttagcactggctactttgtgtttgttttccaacataaagggaacacgttggttaaatggctag</cdnaseq>

Protein Sequence

<aaseq>MEEGRGSPEPAGAADWIVLDPYVRCSWRRRHKYEEEDITASKVG RTCTGFPVRASLRVADPPAVSRLYLHCPPQWPADLPEVRYPDVIAAHRGCILFVAAVP FEEPGFNVDGHYPLDYFIYSASPSSQPLLTRLPPCFVGGFTDQEEDELYQPYHQQRQR YMCSRDVGLLCRDGDGDGEDGRSLFTVAHLTSSGSKEVELCVVQSGEAEEWSITPLRV RRAMSMLGLNLGEWRTDAVLPLHDRFLCWVDYYQGILLIDVLNPGDEPHQFSFIPLPK PVRDGSTRLFSQSYCADPVRCVCVRGSSDSGFFIKLVCVTIAATADKDVYPPAFTITA WTLVSIDQKTWELDFTMEAAEFWDLCANSVGHTCALPRAVPTFSHLSLVDPGVVSFLL MEKIDDEFLFWIVELDMTNKVLRSLPTLYIQVEEEEEDDDEIKKVQEVQGPSRCKAYK RVFHGEYFFPSHFTSYLRKNPIQRFDMCPFCLVIFFRLALATLCLFSNIKGTRWLNG</aaseq>

Gene Sequence

<dnaseqindica>91..1614#actccagccggcggcgagacatctgggagtgggaggtaaaaccctagctagatccgatccgaaccgaacaccgaactgcggcgcggcgacatggaagaaggccggggatcgccggagccggcgggggcggcggactggattgtcctcgacccgtacgtccgctgcagctggcggaggaggcacaagtacgaggaggaggacatcacggcgtccaaggtcggccggacctgcaccggcttccccgtccgcgcctccctccgcgtcgccgacccgcccgccgtctcccgcctctacctccactgccctccccagtggccggccgacctccccgaggtccgctaccccgacgtcatcgccgcccaccgcggctgcatcctcttcgtcgccgccgtccccttcgaggaacccgggttcaacgtcgatgggcactaccccctcgactacttcatctactccgcctccccctcctcgcagccgttgctcacgcggctgccgccttgcttcgtcggcggcttcaccgaccaggaggaggacgagttgtaccagccgtaccaccagcagcggcagcgctacatgtgcagccgagacgtcggcctcctgtgccgcgacggcgacggcgacggcgaggacggccggtcgctcttcactgtggcgcacctcacatccagtgggagcaaggaggtggagctctgtgttgtgcaatcaggggaagcggaggagtggagcatcactcccctgcgtgtccgtcgcgccatgagcatgctcggcctcaacctcggcgagtggaggaccgacgccgtgctccccctccacgaccgcttcctgtgctgggtcgactactaccagggcatcctgctcatcgacgtcctcaaccctggggacgagccacatcaattcagcttcatcccgctccccaaaccggtgagagatggcagcacccgcttgttcagccagtcctactgcgccgacccagttcgctgtgtttgtgttagaggtagtagtgacagtggcttcttcatcaagctggtctgcgtcaccattgccgccaccgcagacaaggatgtataccctcctgctttcaccatcacggcatggactctggtcagcatcgaccaaaagacctgggaactggattttacaatggaagccgccgagttctgggatctttgtgctaattccgtaggtcacacctgtgctcttccgcgtgctgtgccgactttttctcacctgagcttggttgatccaggtgtcgtttccttcctgctcatggaaaagatcgatgatgagttcctgttttggatcgttgagttggacatgacaaataaggtgctgcggtcactgcccaccctctacatccaggtggaagaagaagaagaagatgatgatgaaataaagaaagtgcaagaggtacaaggaccctcccgttgcaaggcctataagagagtctttcacggcgaatacttcttccccagccacttcacctcgtatctgagaaagaatcccatccaaaggttcgatatgtgtcccttctgtttggttatattctttaggttagcactggctactttgtgtttgttttccaacataaagggaacacgttggttaaatggctagcaaattggctgtattgaaacatagcatgtctttatgagctaaatgactaactaatagtacttcggcgattgctttgctgtgtcgagacatgaacatatttgtctgaacgccatgctattttcctgttaacgatgattcaagcagtaactaacttggtgttatccttttgtactcttctataatacgttgtcattgcctcttcagtaaattgcattacattctctattttctgtgcagttcaactagtagagcttgtcatttcgtgaacgttgtactgatttgccagcacatgaccttaataaatttggtcctaagttagtcttggtacgaattaccaattataaacatcacagcttgatataaaagaaaatgatgattgcagtgtcaaaaactacagctcagtctgatgaccgtttgctctgctgaaaagcaaaatttaatactgggcattaagacagccaactgaacaagttcacactttatttgactagtgtgtcttatgtacatatgcttcttttatcacaatctggagctagttgcattaatcatcttgtgtttttgctgctttaccatttattttggtgtagtcggctacggagtcaaatgatgcagaaggcaaagcaagagagcgtaatgcaaaagaaacaagtgaatgtaatgcaagagattccaggtaagcacaattgaacaagttatcagcatttggttcttttcatctggtgtttgatgaatttttgtgctaaaacttcatagaagaaataataaattattggatatttaattttatatgagaatattatttgtagcacaattttactgaatatatacgagacgtgtctatatgacatgtgggtccagaaattttaaatatcacggtgtccgaatatattcgatattggactcgttttgttgtataatttgaatagaaagtgatggttcaaatggattttaaatccgatatacgattcaaaagattgtaactattaaaacaaaagaaataagcaagtgctatcgttactacgtgagcatgcatggtcattggctgtggcgattaaacatatggggtccactgtcattagacatgttaatcacataattatctccagactgcagtacacgttgacggattggctcgtctctgcgtcggcttatcacgaagattagcacagggcgctggaaattcggaggccgcttccgtcgccgctgcctatataagaagcagaacccatctagagcgggggacgccgaggaccatgcatgctcccgtggtaacgatagcacttgcttatttcttttgttttattttaagctgcgcttgtgatcgtcgtcttcaaaattgattgctcgccgaaggttgaagttggtgcagagatttaatgataactgtgatataggtggctttgttttgccgaaacctggtcacaatatattatcaccatgtccatacatgagtcaggtatcataacaaaggggatgacttttgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0587200, RefSeq:Os12g0587200