Os12g0588900

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0588900| Description = Conserved hypothetical protein| Version = NM_001073695.1 GI:115489351 GeneID:4352669| Length = 3072 bp| Definition ...")
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Gene Name

Os12g0588900

Description

Conserved hypothetical protein

Version

NM_001073695.1 GI:115489351 GeneID:4352669

Length

3072 bp

Definition

Oryza sativa Japonica Group Os12g0588900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24831587..24834658

Sequence Coding Region

24832229..24832277,24832522..24832916,24833061..24833139,24833211..24833332,24833445..24833531
,24833625..24833973,24834309..24834622

Expression

GEO Profiles:Os12g0588900

Genome Context

<gbrowseImage1> name=NC_008405:24831587..24834658 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24831587..24834658 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgccgcctcctcctgcggcggcgccggctgcgggccccactgctcctcctccgcctccgccgccgcggtggaggatgctgctgctgcggcggcggagaaggtaggccgcctgtcactctcccgcgagtgcggcaagtgcggcggcggcgccgctgccgtcgccgtcgccggaggcctcggcctgtgcggcgagtgcttccgggccaacctgctcgggaagttcaagctcgccgtcacgagcaacgccatggttcgccccaccgactccgtcctcctcgccttctccggcggccccgcctccagggtagcgctgcaattcatacatgagatgcggtgcaaggcgattgagagctgggacgtgagcaattcacaagccttaccggtattcggtgtcggggtggcattcgtggatgaaagtgttctctgttcgaagccgagagacgagattgagatggcaattgaagatatcaggtcgatcgtgtcgagtttgtcaacaggcgttaaagcgatgcacattgcgcgtcttgaggatgtgttctccaccgaatcggaggatggggaacgcaggttgagggaggcggtggatatgattggtgatgacactgggagggaggatttccttcggtgcttacgcatgctttcgttgcaaaagattgctatggaaaacgggtacgctaagatcatgctaggatcatgtgcttctgcaatagcatgccatgttctgtccgcgactgtgaaggggcaaggttactctttacctgctgatgtccagtatgttgatacacggtgggaaatacctgttgttctcccactccgtgattgcctagcccaagagcttactctcctctgtgaactagatagtttaaaaacacagcaacatctcgataggccttcgaacggcatcaacagtttagttgcatcctttattaaacgactacgggaagagaacccttctcgagagcataccattgtaagaactgcgcaaaagctcaagcccttctcttttaacaaattctcggcagatggctatcatgatttcctaccatcgcgactacgtccaaaattccagaagtttgatagcgatgagtccactttttctgagattctctgtctgatgtgtggaagtccgttcagtgaatcagaactccagaatttggaaagcacaaaacacaaggctcagaagaaaattgatctttatactgctcattgttgtcaaagctgttatttccagattctaccagccggtgaaaacttgaatgaacatttcttttcactactaccaaaattatggactggaaaaatggataccatatctgacagccatagcttgctaagagatcaaatagaagagtacctgcttgaagaaaatgatgatggaaactga</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSCGGAGCGPHCSSSASAAAVEDAAAAAAEKVGRLSLS RECGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGP ASRVALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDI RSIVSSLSTGVKAMHIARLEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLS LQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLR DCLAQELTLLCELDSLKTQQHLDRPSNGINSLVASFIKRLREENPSREHTIVRTAQKL KPFSFNKFSADGYHDFLPSRLRPKFQKFDSDESTFSEILCLMCGSPFSESELQNLEST KHKAQKKIDLYTAHCCQSCYFQILPAGENLNEHFFSLLPKLWTGKMDTISDSHSLLRD QIEEYLLEENDDGN</aaseq>

Gene Sequence

<dnaseqindica>2382..2430#1743..2137#1520..1598#1327..1448#1128..1214#686..1034#37..350#gcgctcgcgtgcttacccgcctcgcgtacccacaccatggccgccgccgccgcctcctcctgcggcggcgccggctgcgggccccactgctcctcctccgcctccgccgccgcggtggaggatgctgctgctgcggcggcggagaaggtaggccgcctgtcactctcccgcgagtgcggcaagtgcggcggcggcgccgctgccgtcgccgtcgccggaggcctcggcctgtgcggcgagtgcttccgggccaacctgctcgggaagttcaagctcgccgtcacgagcaacgccatggttcgccccaccgactccgtcctcctcgccttctccggcggccccgcctccaggttcgcttccctcttcttttttttttccttcctaattttcatttcttttgtgctacataaagttattactcttcctttgcatataattcttcacgtgtttatgatcattagatttgaagtgttattgtattatactttacatagaattcttcatgtgtttatgatcattagagtggaagtgttattgtattatagtactttgcatagaatcttcatgtgtttatgatcattagagtggaagtgttattgtattatagtactttgcatagaatcttcatgtgtttatgatcattagagtggaagtgtaattgtactactacgtgatgtaattatagggtagcgctgcaattcatacatgagatgcggtgcaaggcgattgagagctgggacgtgagcaattcacaagccttaccggtattcggtgtcggggtggcattcgtggatgaaagtgttctctgttcgaagccgagagacgagattgagatggcaattgaagatatcaggtcgatcgtgtcgagtttgtcaacaggcgttaaagcgatgcacattgcgcgtcttgaggatgtgttctccaccgaatcggaggatggggaacgcaggttgagggaggcggtggatatgattggtgatgacactgggagggaggatttccttcggtgcttacgcatgctttcgttgcaaaaggtccgtcagtgtgcttttttgctcttgtattatgctttttgatcagtggatgagttaatgtctattgtttcatgttgatgtgttgttgatcagattgctatggaaaacgggtacgctaagatcatgctaggatcatgtgcttctgcaatagcatgccatgttctgtccgcgactgtgaaggtataccatgtgctgctttctctgtattctgttctttgttaccaattcataattcttgaaaagaacatgatggaaattagaggagcactatgaaattgatatctctacccaggggcaaggttactctttacctgctgatgtccagtatgttgatacacggtgggaaatacctgttgttctcccactccgtgattgcctagcccaagagcttactctcctctgtgaactagataggtaagagaagggggaaaaaccttatttgtttatttcttgaaatgccattgattctaactgaatgtgtttagtttaaaaacacagcaacatctcgataggccttcgaacggcatcaacagtttagttgcatcctttattaaacgactacgggtaagttcagtcctatcatgccaattactacatgtcaaattacacttcacctattcttagttgaactacatccttgctcagcagttatttttgttaattgtttggaggacaacacatctttacagctattattaccatctgcaggaagagaacccttctcgagagcataccattgtaagaactgcgcaaaagctcaagcccttctcttttaacaaattctcggcagatggctatcatgatttcctaccatcgcgactacgtccaaaattccagaagtttgatagcgatgagtccactttttctgagattctctgtctgatgtgtggaagtccgttcagtgaatcagaactccagaatttggaaagcacaaaacacaaggctcagaagaaaattgatctttatactgctcattgttgtcaaagctgttatttccagattctaccagccggtgaaaacttgaatgaacatttcttttcactactaccaaaattatggactggaaaaatggataccatatctgacagccatagcttgctaaggtgatagtggtttctgtttctttatggagtacttcatttcttgttataaacagtgagcgctattggtagtttagcaaatgaaaacattgaacctttggatattggagcttgtttgtctgataatgtttgatttaacgtgaccatgtgtagtatgtgcagttggcccattcatctgttaaagtcctgccctattcagtccttcagtgcactgatttgctaaattgtttatggcattttttttcagagatcaaatagaagagtacctgcttgaagaaaatgatgatggaaactgaacttgatatttcagtgaagcccgaatatattgtaagagagaatctttcgcttcatccttttattttgtgctgtaaaaatcttctctgcatacggtaatgctgtaaaagtcattttggaatgtggtaatcatttatcttatagtttatgctgagttgctgacatatattcttcaaattgttttgttgtagtgccagaaagacagcagagattcctgcctagttgggctcctcacattggcataatcacataatccaaacttgcttcagataatagtgtttctatctagcatggcattggtttattcagaattctgccagatacttacaatttcaacacattatatccttgactcaattcctgatgtttctgtatgtccttcctactcttaagagttgaaacctgtatgaaatccgtatagtgatagcctgatggggcagaccgtcacttgccagcaagtttccaccgatctcaagaccacagacattggacagaaacttccatgtgattacagtattctgattggtcacatctcctgtaccaactattctgtctgcaaaagattgtaacctgaagaatttattcgattattttggaacaatcttctctatacaagatttgcacatactatggtttcaatcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0588900, RefSeq:Os12g0588900