Os12g0604500

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0604500| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001190123.1 GI:297729376 GeneID:9267998| Length...")
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Gene Name

Os12g0604500

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001190123.1 GI:297729376 GeneID:9267998

Length

2917 bp

Definition

Oryza sativa Japonica Group Os12g0604500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25730342..25733258

Sequence Coding Region

25730342..25730399,25731621..25731683,25731813..25732126,25732208..25732459,25732545..25733258

Expression

GEO Profiles:Os12g0604500

Genome Context

<gbrowseImage1> name=NC_008405:25730342..25733258 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25730342..25733258 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccattgttctgctgcctgctccctgctgctgcagcactgttcaggccttcaagagtttgcagtcctgcagatatatttaactgaatgcatgtgcaagaagaagaagaagaagagcaagatggggaaggcgggtaggtggctcagaagcttcctgaccggcggcaagaaggacaggaagggcaaggacggcggccagccgccggcgccgccgtcgccggcgccgccgtctgccaaggagaagcggcggtggagcttccggaggccgccggcgcaggccaccaccaacacgtcgtcgctctgcttctccgacgtgcacgccgtctcgccggcgccggaggcggagagctcggccgccgctgacgtcgccgaggagaacgaggccgccgcggccgcggcggtcaggattcaggcggcgttccgatcctacctggcgaggaaggcgctgtgcgcgctgagagggatggtgaagctgcaggcgatggtgagggggcagctggtgcggcgccaggcgagcacgacgctgcgccgcatgcaggcgctcgtcgccgcgcagaggcgcgcgcgcgccgagcggctgtgcctcctcgacgacgacaaggacaagcacgcgcgctcgccgcggccgccgacgacgaccagccgccgctcgtcgccgcagcaccaccgatcacggaagccactggaggtggtggataggggatcggaggagaacgtgagggtcgtcgaggtggacaatggcggcggcggcggcggcgcggcgagggggtgcgggaggcgcagcacgtgcggcgcggcggcggcggcggcgaagggcgagctctaccagaaggtgtcgccgacgccgtcggcgttgacggaggcgagcgcgcggacaatgagcggccggctcgacgactactccttctccgccgcggcgtccgaggccagcgggcgccaccacagcgttccagcagccgcagtcgccggcggcgaccacgcggcggcgctgcagcagctgttcccgaagaactacatgtcgaacacggagtcgtcgcgcgccaaggcgcggtcccagagcgcgccgaggcagcggcacgaccagccgatcagcgccgctgcctcgccgtccccttcgccgtcgtgcggcgagtggacgacgacgccgggcgaccgccggcgcagggcgtcgctggacccgcgtgacctcgccgcccccgcctccgccgccggcgtcggcgtcggcgcgcgcatggagcggtgcgcgtcgcaggcgcgcgccagcgccagcgcgagcgcggcgtgcccgtgggcagtgaggatggacaggtcgacggcgtcgctcgccggcggcagcgacggcggctcgtccgccgccaccgcggtgaccgcggccacggcggcgcgcgtgacaagctga</cdnaseq>

Protein Sequence

<aaseq>MAHCSAACSLLLQHCSGLQEFAVLQIYLTECMCKKKKKKSKMGK AGRWLRSFLTGGKKDRKGKDGGQPPAPPSPAPPSAKEKRRWSFRRPPAQATTNTSSLC FSDVHAVSPAPEAESSAAADVAEENEAAAAAAVRIQAAFRSYLARKALCALRGMVKLQ AMVRGQLVRRQASTTLRRMQALVAAQRRARAERLCLLDDDKDKHARSPRPPTTTSRRS SPQHHRSRKPLEVVDRGSEENVRVVEVDNGGGGGGAARGCGRRSTCGAAAAAAKGELY QKVSPTPSALTEASARTMSGRLDDYSFSAAASEASGRHHSVPAAAVAGGDHAAALQQL FPKNYMSNTESSRAKARSQSAPRQRHDQPISAAASPSPSPSCGEWTTTPGDRRRRASL DPRDLAAPASAAGVGVGARMERCASQARASASASAACPWAVRMDRSTASLAGGSDGGS SAATAVTAATAARVTS</aaseq>

Gene Sequence

<dnaseqindica>1..58#1280..1342#1472..1785#1867..2118#2204..2917#atggcccattgttctgctgcctgctccctgctgctgcagcactgttcaggccttcaaggtccaggctagcacattgaatcctcaaccattgtggctgtctcgacactcataaacccagcagcctcctacatcagtagcagcagcagcagcaccatggtgtaccagcatgcagtacagatcaaagtttcaaaggcacacattactcatcactattcaatacgccattgttacacactcatcataagcacaatcatgtgaaagaagctagtcaagtcaggaaggagaaggttcaggccactgctcccctctgtccgcaaatataaggtatttggggtttctccatccatccacaaaaatacctttgaatttatcacttattggtagttgaatcggtaggcatgatctttcccgataagtaaagtatcaggggcatcagaggaatttcaccttaaccttaaacagtgctaaacaatttagaaccccttaagtcccatcatttcgcctacagctgactatcagcttaaaaaataacttgtgagcaaaacttttatacttatcttcttagtgactttaaagccaccactgaaaaataaactacaataaaaaaatcaaaatcaactataaaattaaaattttaaattttagccgtgactgataagctaaagaacaaacgatgaacaaactttatgtttgtggaccaagggagtaattaattggtattggatcatgagccctcatgaaaaactttgctcagatggtgtttgttaccactggttaaagtagctagcagtagctgtagcacttgtagaccatggtcattgtagcagtaccacattgtgctgagttgtgccatgtgtttgcttctggaagatgagggagtactgcatgatgcatgaatgaatccacagtgctcacattcatagccaggttaattccagtaaaaaaaagcaaaagaaagattgtactgaattactcaccacatgtagcctctgaaaaccccccttaaatccccacaattacaccataattaacattgtccatctcatatgagggacacatttttctttgttgtcccattttttgcagtgaaaggctgtgtttagatccaaagtttgaatccaaacttcagtcattttccatcacatcaatctgtcatacacacataacttttcagtcacatcatctccaatttcaaccaaaatccaaactttgcgctgaactaaacacagccaaagttgaggagttagtaattggtatgcttaaattgtgttgggtacagagtttgcagtcctgcagatatatttaactgaatgcatgtgcaagaagaagaagaagaagagcagtatgtagattggcagattgcagaggcataggtggaagatgtgtaaggttctagaagcatctagaagccgaagctgaggtcactaggccatcacttctgctgcagaagcttcttctccttcttgtgcagagatggggaaggcgggtaggtggctcagaagcttcctgaccggcggcaagaaggacaggaagggcaaggacggcggccagccgccggcgccgccgtcgccggcgccgccgtctgccaaggagaagcggcggtggagcttccggaggccgccggcgcaggccaccaccaacacgtcgtcgctctgcttctccgacgtgcacgccgtctcgccggcgccggaggcggagagctcggccgccgctgacgtcgccgaggagaacgaggccgccgcggccgcggcggtcaggattcaggcggcgttccgatcctacctggtacgtataatgatacgccattgatgacgccatcatctgttcctggttttgtgcaactcgatggcgtgtgggggggtgcaggcgaggaaggcgctgtgcgcgctgagagggatggtgaagctgcaggcgatggtgagggggcagctggtgcggcgccaggcgagcacgacgctgcgccgcatgcaggcgctcgtcgccgcgcagaggcgcgcgcgcgccgagcggctgtgcctcctcgacgacgacaaggacaagcacgcgcgctcgccgcggccgccgacgacgaccagccgccgctcgtcgccgcagcaccaccgatcacggaagccactggtaagcgaagcgtctccgccaccgcactctagctcgcgacggcgatcatgggagacatgaggagaagatgactatggcattgcaggaggtggtggataggggatcggaggagaacgtgagggtcgtcgaggtggacaatggcggcggcggcggcggcgcggcgagggggtgcgggaggcgcagcacgtgcggcgcggcggcggcggcggcgaagggcgagctctaccagaaggtgtcgccgacgccgtcggcgttgacggaggcgagcgcgcggacaatgagcggccggctcgacgactactccttctccgccgcggcgtccgaggccagcgggcgccaccacagcgttccagcagccgcagtcgccggcggcgaccacgcggcggcgctgcagcagctgttcccgaagaactacatgtcgaacacggagtcgtcgcgcgccaaggcgcggtcccagagcgcgccgaggcagcggcacgaccagccgatcagcgccgctgcctcgccgtccccttcgccgtcgtgcggcgagtggacgacgacgccgggcgaccgccggcgcagggcgtcgctggacccgcgtgacctcgccgcccccgcctccgccgccggcgtcggcgtcggcgcgcgcatggagcggtgcgcgtcgcaggcgcgcgccagcgccagcgcgagcgcggcgtgcccgtgggcagtgaggatggacaggtcgacggcgtcgctcgccggcggcagcgacggcggctcgtccgccgccaccgcggtgaccgcggccacggcggcgcgcgtgacaagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0604500, RefSeq:Os12g0604500