Os12g0604700

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0604700| Description = Similar to LSTK-1-like kinase| Version = NM_001073751.1 GI:115489463 GeneID:4352734| Length = 4054 bp| Definition =...")
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Gene Name

Os12g0604700

Description

Similar to LSTK-1-like kinase

Version

NM_001073751.1 GI:115489463 GeneID:4352734

Length

4054 bp

Definition

Oryza sativa Japonica Group Os12g0604700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25744680..25748733

Sequence Coding Region

25745004..25745579,25745897..25746352,25746455..25746506,25746605..25746678,25746815..25746864
,25746953..25747034,25747112..25747161,25747252..25747294,25747391..25747471
,25747570..25747615,25747707..25747753,25747845..25747910,25748181..25748247
,25748375..25748460

Expression

GEO Profiles:Os12g0604700

Genome Context

<gbrowseImage1> name=NC_008405:25744680..25748733 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25744680..25748733 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagtatgaggtgctggagcagattgggaaaggggcgtttggctcggcgttgttggtgaggcacaagctggagaagaagaagtatgtgctgaagaagattcggcttgcgcggcagaccgaccgcacccgccgctctgcgcaccaggagatgcaacttattgcgacggtcaggaatccgtttatcgtggagtacaaagattcatgggtggagaagggttgctatgtctgcattgttataggatattgtgagggaggagacatggctgaagctattaaaagagctaatggtacatatttctctgaggagaagctttgcaaatggcttgtgcaacttctcatggctctagattatttacatgcaaaccacattcttcaccgagatgtcaagtgctccaatattttcattgccagggaccaaagtataagacttggtgactttgggcttgcaaaaatattgacttctgatgatctggcatcttctgtagtaggaacaccaagttacatgtgtccagaacttcttgctgatataccatatggtaccaagtcagatatttggtctctaggatgttgtatatatgaaatgaccgcgctcaggcctgcatttaaagcttttgacatgcaagcgctgattaacaagatcacgaaatcaatagtctcaccattacccactaaatattctggtgcctttaggggacttattaagagcatgctgcggaaaagtccagagcacagacctagtgctgcacagctactcaagcatccacaacttcagccttatgtgctgcaagtccaattgaaatctagtcctactcgcaacatacttccaatccatcaatctttgactgacaaagttaagaagatgacatttcctagtgacgtggttgattctgcacgcagaagaatggccaggaggaactctctgggaaatgagaggactgtgacatttagcaagccatctccggaacggaattcagttagctctacacggagcatcaaagaatacacaaccacccagagtgtcaaagggctctctgttgacagtagtgaggctggggatgaggttaccagtaaagccatcataacaaagacatcaagcatcctaaggacgcccaagagcttgccagccaagacttatacagctagaaatcagcttgaacctcccaaaacatcgtataacagaacataccgctctgagctgccctcaaaaacaactccaaacaaaattgcccgaccagcaagaagagcatcactcccgctgtcaacatatgaaacacccaccaagcgcagcatcagcattctggaacaactagactcccctgacgtctctgtgaatgcccctcgaatcgacagaattgcggaattcccactggcatcgtctgaggaccccttgctccccatccacaacaagctctctcctggccatggctcatgttccactcctccctttatcaaccggtcaatcaccaaggacaaatgcacgatccaggtgttacgcaccgatggggacaacgggagcgactcctcaggccgcaacgccactgctgcctcgagccgcggatccaatgactccaggcagcagcggttcgacacctcgtcgttccagcagcgtgccgaggcattggaagggctgctggagttcagcgcgcagctgctgcagcaggagaggtatgaggagctgggcattctgctgaagccattcggaccggagaaagcgtctcccagggagacggccatctggctcacaaagagcttcaaggagacggcatcatag</cdnaseq>

Protein Sequence

<aaseq>MDQYEVLEQIGKGAFGSALLVRHKLEKKKYVLKKIRLARQTDRT RRSAHQEMQLIATVRNPFIVEYKDSWVEKGCYVCIVIGYCEGGDMAEAIKRANGTYFS EEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFIARDQSIRLGDFGLAKILTSDDLA SSVVGTPSYMCPELLADIPYGTKSDIWSLGCCIYEMTALRPAFKAFDMQALINKITKS IVSPLPTKYSGAFRGLIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQLKSSPTRNIL PIHQSLTDKVKKMTFPSDVVDSARRRMARRNSLGNERTVTFSKPSPERNSVSSTRSIK EYTTTQSVKGLSVDSSEAGDEVTSKAIITKTSSILRTPKSLPAKTYTARNQLEPPKTS YNRTYRSELPSKTTPNKIARPARRASLPLSTYETPTKRSISILEQLDSPDVSVNAPRI DRIAEFPLASSEDPLLPIHNKLSPGHGSCSTPPFINRSITKDKCTIQVLRTDGDNGSD SSGRNATAASSRGSNDSRQQRFDTSSFQQRAEALEGLLEFSAQLLQQERYEELGILLK PFGPEKASPRETAIWLTKSFKETAS</aaseq>

Gene Sequence

<dnaseqindica>3155..3730#2382..2837#2228..2279#2056..2129#1870..1919#1700..1781#1573..1622#1440..1482#1263..1343#1119..1164#981..1027#824..889#487..553#274..359#gaaccccaccaaaaaccccatcttttttttcttttcttttcattttcgttcttccctcgctgcggctttcaatttcgcggctcgtgttcttctcttctcggtgcccctgccttggctctcctccgatcaaatgcggcgagatctgcgcgcgtgaaggcgtcggcgcgggggcccaaagatcgatcctttgctgatcgggagtttgggtggggggaagcgagttcttggatcttcgcggtggtttcttgggggcgtctctcgtaggaaaaagggatggatcagtatgaggtgctggagcagattgggaaaggggcgtttggctcggcgttgttggtgaggcacaagctggagaagaagaagtgagcttttgactcgacattgttcatctcatttttctttctttccttttttttttggcattcttgaagctcactgttatttcagccattttgatcatgttggaggtttgtgtgtgtgtttatgcaggtatgtgctgaagaagattcggcttgcgcggcagaccgaccgcacccgccgctctgcgcaccaggaggtaaaagcatcatcatctctgcatgagctgcatttttcagcttctggtacctagtaagctatggtttcaaggggaatgccttgtgttcaccatgagctgcataaattggtgtgttgggtggtggtgatgatgatgatgctagtgtgtttagtttggctggtgctgaactgatctgaaactgtgaagttaaaatgatgtgatgtcttcttgctcttgtgcggtacttcctttttttttatactgatttatgtggaaatgctcctcatgcagatgcaacttattgcgacggtcaggaatccgtttatcgtggagtacaaagattcatgggtggagaaggtaggtgaaaaggactgaagagaaggttatgaagttgggagggtggaatagatttgtttcattctcacttctttatctttggatttttcagggttgctatgtctgcattgttataggatattgtgagggaggagacatgtatgtgttcctctgatgaaatccttttaaaatagtttattttgttcttgaactttagttccttagctaacacaatctataatcggttcagggctgaagctattaaaagagctaatggtacatatttctctgaggaggtgtggattctgaccttgcatttcctttgataccttaaaaattgctttgctgcaaacaagggatgtgcactgaaatgtttttctcatttttttttcagaagctttgcaaatggcttgtgcaacttctcatggctctagattatttacatgcaaaccacattcttcaccgagatgtcaaggtcagtagtagtgctaaacttgggagtaccttatagtatttatatttccatggcatggaaataatatatactaaagctgctaaaaattcgtttcagtgctccaatattttcattgccagggaccaaagtataagacttggtatgtatcttagtcccaaaaagtatcatactttatgtatgggtttagcaatcctggtaatgttgcaattccaaatttaaaccaatgcaggtgactttgggcttgcaaaaatattgacttctgatgatctggcatcttctgtaagtaattgtagcacttttcatatttccagtacatattcgatgtcactcttagtagtatattgctcccaacacaggtagtaggaacaccaagttacatgtgtccagaacttcttgctgatataccatatggtaccaagtcagatatttggtctctaggtatatatgacttcaatttgagaaaccactttcctgccctaaatggaaaacttactattgaactctcatttttattactttgtttcaggatgttgtatatatgaaatgaccgcgctcaggcctgcatttaaagcttttgtaagtccctgttttggtttctttacttttactgtgtgatggtttatttgagcatatgtttagatactacatctatgctaatagtaatgcagtgttatgaaacgtacaagggtctaattttctcatttccctgcaggacatgcaagcgctgattaacaagatcacgaaatcaatagtctcaccattacccactaaatattctggtgccttgtaagttttgaactagttgccttttgttgtttcaccctattttgcccaccatcttatctggatagagcatgcttcttaaatttatattctgcgtgcagtaggggacttattaagagcatgctgcggaaaagtccagagcacagacctagtgtaagtccattatactatatcctagttactactttgtaatagttgctgatgtatactcctatttgttttgtggtataaatatttactaaatttcctgtacaggctgcacagctactcaagcatccacaacttcagccttatgtgctgcaagtccaattgaaatctagtcctactcgcaacatacttccaatccatcaatctttgactgacaaagttaagaagatgacatttcctagtgacgtggttgattctgcacgcagaagaatggccaggaggaactctctgggaaatgagaggactgtgacatttagcaagccatctccggaacggaattcagttagctctacacggagcatcaaagaatacacaaccacccagagtgtcaaagggctctctgttgacagtagtgaggctggggatgaggttaccagtaaagccatcataacaaagacatcaagcatcctaaggacgcccaagagcttgccagccaagacttatacagctagaaatcagcttgaacctcccaaaacatcgtataacagaacataccgctctgaggtattccattttgtgccttttttttctatattatttgtgcactcaataataccagtgaacctgttcttcatttgtttagaaactacaatagcctcaattatagcatgtgcttgctcagtgcatactacattagtgttattcagcttttggtcttttagagttattaagatcttgtcatgatgcagttgtttctttatgctatttatggcttcagcacgagcttgcattttgcatgattatgctgcctctttcattatttgtctgttgaaatgaatgtgccaatattcattgagctccaatttcttccacttttacagctgccctcaaaaacaactccaaacaaaattgcccgaccagcaagaagagcatcactcccgctgtcaacatatgaaacacccaccaagcgcagcatcagcattctggaacaactagactcccctgacgtctctgtgaatgcccctcgaatcgacagaattgcggaattcccactggcatcgtctgaggaccccttgctccccatccacaacaagctctctcctggccatggctcatgttccactcctccctttatcaaccggtcaatcaccaaggacaaatgcacgatccaggtgttacgcaccgatggggacaacgggagcgactcctcaggccgcaacgccactgctgcctcgagccgcggatccaatgactccaggcagcagcggttcgacacctcgtcgttccagcagcgtgccgaggcattggaagggctgctggagttcagcgcgcagctgctgcagcaggagaggtatgaggagctgggcattctgctgaagccattcggaccggagaaagcgtctcccagggagacggccatctggctcacaaagagcttcaaggagacggcatcatagcgccaccttgtatcaggcgcgtctaaaatcgccagttttgtcatgtgcaatattagctcaggtagtggtaaacaatatttaggatttgagacttttagctgttgggaggcagcaccatctcagtgttgctgttaactcaaaatctacttctagctctagctagtttccagttttttactttctattaggaatcagcaatcagcagcaggagttgtagtagtagaactgtaagttaagctgaagatcttgcaagatcttagaacctttgtaatcatgtggcacctgcaatcatgtagtgatataaatgtggggttaaggatatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0604700, RefSeq:Os12g0604700