Os12g0605400

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0605400| Description = Similar to CROC-1-like protein (Fragment)| Version = NM_001073756.1 GI:115489473 GeneID:4352739| Length = 2228 bp| ...")
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Gene Name

Os12g0605400

Description

Similar to CROC-1-like protein (Fragment)

Version

NM_001073756.1 GI:115489473 GeneID:4352739

Length

2228 bp

Definition

Oryza sativa Japonica Group Os12g0605400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25785317..25787544

Sequence Coding Region

25785599..25785739,25785831..25785956,25786080..25786219,25787311..25787344

Expression

GEO Profiles:Os12g0605400

Genome Context

<gbrowseImage1> name=NC_008405:25785317..25787544 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25785317..25787544 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag</cdnaseq>

Protein Sequence

<aaseq>MASSGDPSAVVVPRNFRLLEELERGEKGIGDGSVSYGMDDADDI YMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDRPPTVKFHSRINMTCVNPENGLVD QRKFSLLSNWRREYTMEAILTQLKKEMAASHNRKLVQPPEGTFF</aaseq>

Gene Sequence

<dnaseqindica>1806..1946#1589..1714#1326..1465#201..234#gtcgcggctctggggatcggctcgtcttcccccctcttctttggttggcttcgtctccgcgcactcacacaccaccaccaaaggggaacggaagcgaacccctcctccgccgccgccgccggagatcgcccgctgtcccgccaatccgccgctgcggcctctggttgtcgtcgcgaagccggcgcctgcgctcagctgggatggcgtcgagtggagatccatcggcagtcgtcggtaagcctagcttctcctggatccgcttcctttgacccgcgccccccgatctcctcctctccctctagcgcgagcgcggagcctaccccggaacctccgtttcctctatggatggatggattgattgattgattggatcgattttttttttttttggggggggggggggggtcccaattcgctcgctgctgtcacctgccgtggatccatcatcggagcagatcgatttggctgctatgtgttctggttcgcacacactgcgtaccgattaattaatattcaggacgattgcgaaatctcccttgatatatcagggaaggggaaagtatagacgtttttcgtggttttcctcatgatatggtgcactagaggcatatgctatttgtccctgttcgattattgcatcgaggattcgaggtgtgctatttgaatgaatgacggttaaaatgatagtagtagcagctaaatgtacttgtaatcttatcatggagcaggaaatgttggatctttcagaaaggtagcattagttgtcagttattacttgtggattggtagaatgcagtattgggcttctcgccttctccatacacgatgttttcgtttgacagactagctttgcctaaagccccaaactggtggtggaagctatcacttgtagtttaccaggagtccaggactattgctagagtcgaatgcttgggctggacatttttcccttctaagccttcattcagtttttgcgcttatgtggtcagagcgtaaaatagtttgttagcggttgtcttttccccgttcataaatgattgtctattacttagcacttactgcaatcagttgggcacttggaccccatttcatctcgttacataaatcctcatggtttgaatccaaattagtgggtttggaacttacattttaaaacaagttcatgatgcttgtatttgccaagataagtttttgaatggatatttggcaaaatacttgcccttggtaccttcttgatgtaaccaggaggagaatcgtatcctggttgtgtttttaatgctctgtgaagcaagctgtgttattaactagtataaatgttatctcagtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataacgtaagttgtttgtttccattgcttactcttgtactcataatcttcatatgtaactgttgcgttctgagctcgacgctttcttgttgatatatatttggtttcgaacatttgaatttttgatagactgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaatggattggtatgacacgagaaatttggttcagaattatttctaactcttgtgttcaattatttgattaattaaaacttatcttttggagctaatgtaggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctagaagcaggcgcccgccactcatctccgcatgccatggatgaaccattgtaattctctttctatatatcgcatgagatttgagccgtctgaacatttggtgcaaatgattgtagctgaacttcgctggtactaccttgtacgtggtccgtgtacgtcctgtgtttgtgtcgtgtctcgcttgtttggttaacagtttgccagtacggcattacctcaagagacaaaactaacgaattggggtaaaatctttgtaatgaatctagtgatgctctgcagatttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0605400, RefSeq:Os12g0605400