Os12g0611300

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0611300| Description = Patatin family protein| Version = NM_001073785.2 GI:297613520 GeneID:4352770| Length = 1912 bp| Definition = Oryza ...")
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Gene Name

Os12g0611300

Description

Patatin family protein

Version

NM_001073785.2 GI:297613520 GeneID:4352770

Length

1912 bp

Definition

Oryza sativa Japonica Group Os12g0611300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26065011..26066922

Sequence Coding Region

26065789..26066868

Expression

GEO Profiles:Os12g0611300

Genome Context

<gbrowseImage1> name=NC_008405:26065011..26066922 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26065011..26066922 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccgccgacgccgcagccgccgccgccggtcgacgtcgacctcggcaagctcagctacgagatattctccctcctcgagagcaacttcctcttcggcgccggcgccggcggcggcggaggtgtttgctcgctgcctgggacgcccgggagggcgcttcttggagggaaggtgagggtgctcgcgatcgatgggtgtggtccgggaccaggtgatgctctgctggcggcggcggcgctggtgaggctggagacggcgttgcgggagaagtccggcgatggcgatgcgagggtggcggatttcttcgacgcggcggcgggggccggggcggggggtgtgttggcggcgatgctgttcttgaagggggcggatgggcggccgcggtacacggcggcggacgcgctggcgttcgtggcggcgagcctcgggaagggcgggtggcgcggcggcggcggcggcggcggggggaggaggtggtggggggtggcggcgctgttccggcgcgggtcgtcggcggagaggtcgtcgctgcggcgggtgttcggggacgctcacgctgggacaactgtcgcgccgctgctcgtcccgtgctacgacctcgccaccgcggcgccgttcctcttctcccgcgccgacgccgtcgagagcggcagcttcgacttccgcctccgcgacgtctgcgccgcgacgtgcgccggcggggccgccgccacggccgtccgctccgtcgacggccgcaccgccatcgccgcggcgtcgggcggcgtcgcggccatgggcaaccccaccgccgccgccatcacccacgtcctccacaacaagcaggagttccccctcgccgccggcgtcgacgacctcctcgtcgtctccatcggctccggctcctcctccgccgccaccccttccaccgccgccgggtggcgaacgcctctcccctcccgctcgccgtcgcccgccgagatggtccgcctcaccgccgagggcgtcgccgacatggtaaaaaaaacacacacccacacccaatcccaaccctccatctcgaatccgacggctcccatcgaaccacgtcactaa</cdnaseq>

Protein Sequence

<aaseq>MASPPTPQPPPPVDVDLGKLSYEIFSLLESNFLFGAGAGGGGGV CSLPGTPGRALLGGKVRVLAIDGCGPGPGDALLAAAALVRLETALREKSGDGDARVAD FFDAAAGAGAGGVLAAMLFLKGADGRPRYTAADALAFVAASLGKGGWRGGGGGGGGRR WWGVAALFRRGSSAERSSLRRVFGDAHAGTTVAPLLVPCYDLATAAPFLFSRADAVES GSFDFRLRDVCAATCAGGAAATAVRSVDGRTAIAAASGGVAAMGNPTAAAITHVLHNK QEFPLAAGVDDLLVVSIGSGSSSAATPSTAAGWRTPLPSRSPSPAEMVRLTAEGVADM VKKTHTHTQSQPSISNPTAPIEPRH</aaseq>

Gene Sequence

<dnaseqindica>55..1134#gcagtagtaaattggacaccgcaccaccaccgaaaagctcgcactctcctaaccatggcgtcgccgccgacgccgcagccgccgccgccggtcgacgtcgacctcggcaagctcagctacgagatattctccctcctcgagagcaacttcctcttcggcgccggcgccggcggcggcggaggtgtttgctcgctgcctgggacgcccgggagggcgcttcttggagggaaggtgagggtgctcgcgatcgatgggtgtggtccgggaccaggtgatgctctgctggcggcggcggcgctggtgaggctggagacggcgttgcgggagaagtccggcgatggcgatgcgagggtggcggatttcttcgacgcggcggcgggggccggggcggggggtgtgttggcggcgatgctgttcttgaagggggcggatgggcggccgcggtacacggcggcggacgcgctggcgttcgtggcggcgagcctcgggaagggcgggtggcgcggcggcggcggcggcggcggggggaggaggtggtggggggtggcggcgctgttccggcgcgggtcgtcggcggagaggtcgtcgctgcggcgggtgttcggggacgctcacgctgggacaactgtcgcgccgctgctcgtcccgtgctacgacctcgccaccgcggcgccgttcctcttctcccgcgccgacgccgtcgagagcggcagcttcgacttccgcctccgcgacgtctgcgccgcgacgtgcgccggcggggccgccgccacggccgtccgctccgtcgacggccgcaccgccatcgccgcggcgtcgggcggcgtcgcggccatgggcaaccccaccgccgccgccatcacccacgtcctccacaacaagcaggagttccccctcgccgccggcgtcgacgacctcctcgtcgtctccatcggctccggctcctcctccgccgccaccccttccaccgccgccgggtggcgaacgcctctcccctcccgctcgccgtcgcccgccgagatggtccgcctcaccgccgagggcgtcgccgacatggtaaaaaaaacacacacccacacccaatcccaaccctccatctcgaatccgacggctcccatcgaaccacgtcactaactcaccatgggtaaaaccgtaaattcccaggtcgaccaagcggtggccatggctttcggacacacgtgtgggcgcaactacgtccgcatccaggtcagacccgaaaaatctaattaccgaattacccctccatttttaccattttacccctcatttttactgacctcgtcggcgatgtgtgttcactgaccaggcggcgtcgccggcgtgcaagacgaaggcgctgagctcggtggacgcgaagaaggcggcggcgatcgccgacgggatgctgacgcagcggaacgtggaggcggagctgttccgggggcggcggctgtcggagaagtcaaaccgggagaagctggacgcgttcgcggcggagcttgtgaaggagcacgagcggcggcgggcctcgccggggctccccaacgtggtcatcaagcaggtggccgccgccgccgccgccgtgacgccggcgcgcctctcgtcggcgaccaccacgtcgtccgccaccgccaccaccgccaggaccaccgtctccagcatgccgtcgccggcggcgtcgctggactccggccgccactagcagcggcggcggcgatcgccggcgacgtcgtacgtgtagaagttttgtacatttgccatccatggacagaccgatcgaggagatggttatttaattttttttttatttacgtcttccgatgagtcactgacatgcgggcccaaccaagatggaaatgaggtgaaatatttataaacttaagttatataaatatttatgtaacttatatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0611300, RefSeq:Os12g0611300