Os12g0612100

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0612100| Description = Conserved hypothetical protein| Version = NM_001073788.1 GI:115489537 GeneID:4352773| Length = 4025 bp| Definition ...")
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Gene Name

Os12g0612100

Description

Conserved hypothetical protein

Version

NM_001073788.1 GI:115489537 GeneID:4352773

Length

4025 bp

Definition

Oryza sativa Japonica Group Os12g0612100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26115411..26119435

Sequence Coding Region

26115561..26115758,26115853..26116104,26116565..26116747,26116836..26117060,26117415..26117474
,26117556..26117671,26118063..26118135

Expression

GEO Profiles:Os12g0612100

Genome Context

<gbrowseImage1> name=NC_008405:26115411..26119435 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26115411..26119435 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtatcaaccacggagttcaaaggtgaatattcgttgccaagcaagaaatctcctcttgatcaatttgaaggtgtgaagacacatctttaccgtctcggtgcagaacatgaaaatggtaccctcaaaagctttgcatatactgatcagggcagcccaagtttgcttgatacaatcattctttctcagtgggaggattatgcttggaagggccattttggatatgacgtaactgcttgcaatctcaaggttgttgaaggtggatggagttttgttgttcagctgaatgataagtggaattcatgtgtcctcaaggaacatgacaagttccttgaacctgttggatgcctgaagccaaactgtatgaatagttatgatgaattgcttctgtgcattgctcaaggtgacaaggatatacctgaagttgttccttcaacaaaaccaccaaaggatggactactgctgattgcaaatgcatatcctgttgaatatggtcatatcttcttggtcccaagcgcaaccaatcagctatccttcttctgggacaaaaggatgtttagtctgattgcaaggattgcctctgaagtaaatagtgcagcattccgggttttctttgatagttgcacatccacgatgccagaccacatgttttttcaggcttgttacttcgcaaacccgttgccagtggagtctgcatcaactgttgcaatttaccacggcaaagccacatcagccgttcacctgtatgaaataattgattatcctatgaaggctcttgtgttaactggcaaggacgtaaacacgcttgccaattttgtcagtgaagtatctttaactctgcatgacaataatactgcgtacagcctgctgatctccaacaatggcacaaaggttttcttgtttccacaggtgaagaatctggctactggatgttgtctttctgcctgggagtgcagtggctacttcatttatcgcgccaagtacgattttgacagagcttctgagaatgaaatttccaacagaatggcgtcagtcacactccaagatggcgcattcgagaacctgaagaatctttgctgcgctgttgctgatgatcttgttatgtaa</cdnaseq>

Protein Sequence

<aaseq>MVSTTEFKGEYSLPSKKSPLDQFEGVKTHLYRLGAEHENGTLKS FAYTDQGSPSLLDTIILSQWEDYAWKGHFGYDVTACNLKVVEGGWSFVVQLNDKWNSC VLKEHDKFLEPVGCLKPNCMNSYDELLLCIAQGDKDIPEVVPSTKPPKDGLLLIANAY PVEYGHIFLVPSATNQLSFFWDKRMFSLIARIASEVNSAAFRVFFDSCTSTMPDHMFF QACYFANPLPVESASTVAIYHGKATSAVHLYEIIDYPMKALVLTGKDVNTLANFVSEV SLTLHDNNTAYSLLISNNGTKVFLFPQVKNLATGCCLSAWECSGYFIYRAKYDFDRAS ENEISNRMASVTLQDGAFENLKNLCCAVADDLVM</aaseq>

Gene Sequence

<dnaseqindica>3678..3875#3332..3583#2689..2871#2376..2600#1962..2021#1765..1880#1301..1373#ggccgagagggaggcgtccgcacgtttcacggtctctctctccctcctcgaccagccgtccacacgtccacttccccatctcctcctcctcctcctcctccccccttcctgcccttgggtcagacgacgaccgcgcgcactctgccgccgccgattcattcttggtaccaattctttaccccaacccttcttcttgatccgatgcaatttcttgggttcctgttcatgcatgttttttttttttacctttaccgccgattcttggtttggtggtgtttggattgggcgagattggtggcggatgtgggaaaattttggtattgattggtccaatctggatttgtggggggaaagattgggttttgcaccgtggtgtggagcaatctggtagcttctacggttgtcacgtcccaattttattgggttagaattctgatgatagtgtgtgttcaaaggcttctggttttacacacctgatgcggcaatacatgcaaaagaaggaaaaaaaatctacctttgtgttatacatactctaattgctatattttcctcgattgttttgaagaatgtgcataggtgtctacctttttggacagtaataagaattcttcagcgttagatattatgttgcataaagatatgtgaatataatccaatatacacggtgatttcagaagtcactacctttacttgagacaaatttatgtattcccctctttgcttacaagtgtccaggtgtattaggagactgatctgtttggagtatctctacagtgttttggcatatgaatatagtatatttatgcgaattcttcatgcaaccatagatccactcatggattgtttttcttttaatgctcaaaactcattttcagattgactactccttttaagtgctcgatttgattctgacttctatcatgtgccagattgccctgtgaggctgcataaaggctccatcataatccaagaacttgttggaggctcctaaagaataaccaagttggtcttgctcaggtggttagctggtccggtagggctggcttgaaaagagcaaccacggctccaaagaaaggatcccgtgttgcactaagaaggggaacacaatgtgcccatcgctttcctaagtttcttcttgcgtccccttctttccacggtggtcgcggtgccctcccatctgcaggggggcatccttctgatttgacctaccttgccggtggtggtgctgttcaagtctgaattaggctttagcattgtagatatttttttagtagtagtacagatattaagcattgtaagtatggtatcaaccacggagttcaaaggtgaatattcgttgccaagcaagaaatctcctcttgatcaatttgaaggtaagcaataattgtctatctgatccatgctgttctttactcctatattctgagttatatctattccctgccaaaacgttacctgctgggagtgctcgctactcaagtgtgacactgaaaacacagcaatatcacaataggattagcctgtgtaagctgaataatattgcatttgcaataaaattctgtgttacacgacatgagtcagataagctagctgttttgcagttttaattcatgataaatgccttccttctacaagggttagtttagaatgagaacaccaaaataagttctcagaagcacgtcgaataaatttagaataacagcataggttcagttaagttttatccttaatattgcaatagtcatgaactctttggattttcaggtgtgaagacacatctttaccgtctcggtgcagaacatgaaaatggtaccctcaaaagctttgcatatactgatcagggcagcccaagtttgcttgatacaatcattctttctcaggtttgtatcatccaggattccacatcattttcagagttctcgttgccccatttgtaatacatggattttcctttgtaacagtgggaggattatgcttggaagggccattttggatatgacgtaactgcttgcaatctcaaggtgcttactggatctttttgttcatccatctcttccaaagttggatgatagaaaattattaaattccttttgtttatagtggtttatgatatgcaatccataagtaaaattggcatgcttaagttgctttttgaacacgatataattaaacatttttcttttggatatataaccacctccctactatccgtccatcattaataggcattcagaggctttgcatggctgtgaaaccaatattattatttccattataaaaaaaaggatgccagcccagttagcaatatctctaggtcaatgtgatgcccttagacatgaacttgattgtaacaatgtgtttgcctgtttctgcaggttgttgaaggtggatggagttttgttgttcagctgaatgataagtggaattcatgtgtcctcaaggaacatgacaagttccttgaacctgttggatgcctgaagccaaactgtatgaatagttatgatgaattgcttctgtgcattgctcaaggtgacaaggatatacctgaagttgttccttcaacaaaaccaccaaaggatggactactgctgattgcaaatgtaagttgcaggatgagcttcaaataactcgtgccttaccttcctctatataactgctagttgacacctgcattttcttgttctgaaggcatatcctgttgaatatggtcatatcttcttggtcccaagcgcaaccaatcagctatccttcttctgggacaaaaggatgtttagtctgattgcaaggattgcctctgaagtaaatagtgcagcattccgggttttctttgatagttgcacatccacgatgccagaccacatgttttttcaggtaatactgtctagttctgatgctcaaagaactttctattacttcaatcatgcgttgttcacttaagcatcctgtatccctgtttgatggaagcaacattcagttttttaagtagaacactcatgttaagcattgaactgctatcctgtactttttgttatagtgtatctctagtgtttgcagcatatatcaatatttaatctttgccttttgttgtttgtaatcttctactttaatttgctatgatatgtaagattgtaaacagtacatttgaatacagccatgatatcctgtaccgtttgccttttgaatggtttaatgttcggtatggaaactagtgagtgaataagttctctgtaataatatgtagctgagatactgtaattctctacttgcaaaggttgtgtgaaggagaatttatttatttatttatttatttgcaaaattataaaaatcacaggcttgttacttcgcaaacccgttgccagtggagtctgcatcaactgttgcaatttaccacggcaaagccacatcagccgttcacctgtatgaaataattgattatcctatgaaggctcttgtgttaactggcaaggacgtaaacacgcttgccaattttgtcagtgaagtatctttaactctgcatgacaataatactgcgtacagcctgctgatctccaacaatggcacaaaggttttcttgtttccacaggtgaaactcgttgatctgcagtgtttcctttgcaaactttttttgtttcagcaaccaataagaggatgaatactgttaatatctttggctttaggtgaagaatctggctactggatgttgtctttctgcctgggagtgcagtggctacttcatttatcgcgccaagtacgattttgacagagcttctgagaatgaaatttccaacagaatggcgtcagtcacactccaagatggcgcattcgagaacctgaagaatctttgctgcgctgttgctgatgatcttgttatgtaaaagcttgtgaaagaatcaaaaccacaataataaaaccgtgtgagggtggtccacttgttatgtctatagcattttaatgcatggatgatggtaattgaacctatgtctgaacatttggattgatcaatggagcatgctgttcttatggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0612100, RefSeq:Os12g0612100