Os12g0612300

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0612300| Description = Conserved hypothetical protein| Version = NM_001073789.1 GI:115489539 GeneID:4352774| Length = 3717 bp| Definition ...")
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Gene Name

Os12g0612300

Description

Conserved hypothetical protein

Version

NM_001073789.1 GI:115489539 GeneID:4352774

Length

3717 bp

Definition

Oryza sativa Japonica Group Os12g0612300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26120772..26124488

Sequence Coding Region

26121264..26121317,26121442..26121543,26121804..26121930,26122183..26123621,26124321..26124338

Expression

GEO Profiles:Os12g0612300

Genome Context

<gbrowseImage1> name=NC_008405:26120772..26124488 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26120772..26124488 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggccgaatccttggagtatgagctgcagaaggaggtctccaacatcatgatccagagctacattactagcatgcgtcgagagttcgagacaaagttatgggagaatcagaactgcattagtaccttgaacaaaaactggaaggaaaagatatctaagattgccgcactgcgagatgaactcagtactatttacagtgttgtatcagcttcagaatctggtgtgttttcttctcatggtagtcacgaaaaggtcgaagagctcaactttttgaagatgaaggatgataacgagtcatcaatcacagagagaactacagattcaggtgagctcatgtttgatatcccggacttctcactcttaaagcacatgccaagtgaagaagtcacaaattttctaaaatcagaatggctgaagttgcgaagacagcacgagtctgaattgcatgagaaaacagaagagttgtttaggctaaaaagggaatttgcgaaagatatagctttgttgccttctaggaaagagagagaacttgaaatcatcaaatcaaagttgcttcaaagcatttcaaaattggatgaaatcaccttgagagaagataacccttattgtgataattatgatgatgccgaggtttgcggatttgaggacagaatcggctctttacttcatgaaaatgaacaactacaaggtttgctagctgacaaaaaaatggtggctaaacatctgtctttacaagtattagatgcagagaggaaaatggcacagcactcgttgtccgagttaaaacttgtgaaacaagttgagaagcttagccatgaacttgaagatttaaagattgagagccacattaaagatttattggagctgtcgacattaagagaagtttttgataattatgagaatcatattgatgatgctaatcaggaggagaccttcctcagagagttgcttatagaaaaagaagagcagttgagtattatgtatgaagacagacagaagctaaagtatgaaaacaatcaacttgtagcaattgcaggatcaacattaatgcagcaccatgagcaagtcaacttggttaatgaccttaccaattttagggagaaggtgtgcgagcaagagttgttgatcttagagtccaagagtgagtctaattcaatgaagagtagcttgtatgaggctttgcagcaaattaatgtatgcaagcaagagatacatggtctgactgacaacttaactgccatgtctattgctttggaggaagccaaagaacagaatgcctcacttgatgccaccatccaggaaatgaagaaaacatcggcgccaagcattaacagtcataagggacaagcagggcacctagaatatgcccttgttagtatggagaagttatctaaatcatacagcgattttgaaagcagattggctcaaagtatgaagagaaatgaaattaggttgactaatataatttgccagtttaacccactggtgcagcaagttgctgtattaaagaaaaaagaattctggtataaacagatactcgagattaaatgctctaatctccagaaagcagaagctgaggttgatatacttggggatgaagttgatgctcttcttagtattcttgggaagatctacatagcacttgatcattattctcctgtattgaagcattatcctggggttacagagattttgaatctggttcagaaagcattgaaaggagaaagtatttag</cdnaseq>

Protein Sequence

<aaseq>MEAAESLEYELQKEVSNIMIQSYITSMRREFETKLWENQNCIST LNKNWKEKISKIAALRDELSTIYSVVSASESGVFSSHGSHEKVEELNFLKMKDDNESS ITERTTDSGELMFDIPDFSLLKHMPSEEVTNFLKSEWLKLRRQHESELHEKTEELFRL KREFAKDIALLPSRKERELEIIKSKLLQSISKLDEITLREDNPYCDNYDDAEVCGFED RIGSLLHENEQLQGLLADKKMVAKHLSLQVLDAERKMAQHSLSELKLVKQVEKLSHEL EDLKIESHIKDLLELSTLREVFDNYENHIDDANQEETFLRELLIEKEEQLSIMYEDRQ KLKYENNQLVAIAGSTLMQHHEQVNLVNDLTNFREKVCEQELLILESKSESNSMKSSL YEALQQINVCKQEIHGLTDNLTAMSIALEEAKEQNASLDATIQEMKKTSAPSINSHKG QAGHLEYALVSMEKLSKSYSDFESRLAQSMKRNEIRLTNIICQFNPLVQQVAVLKKKE FWYKQILEIKCSNLQKAEAEVDILGDEVDALLSILGKIYIALDHYSPVLKHYPGVTEI LNLVQKALKGESI</aaseq>

Gene Sequence

<dnaseqindica>3172..3225#2946..3047#2559..2685#868..2306#151..168#gcctttagtggaaaaagctgctccttttttcgcttcttcctccgctcccatttcaatttcgtgcgtgtggctttctcctctccgcgttttggtttcccgcgcgcggaggagggaaagattttgccgtgttcttgccggcggcgagccgccatggaggcggccgaatccgtgagtgttccttcctcgtgaacccattgggaatatcgtgcatttcttctttattcgtttcttggttctttcaggtcggttggttggtttaagttttgaatttctggttcagttctgagtctgatacggtgtaattgattcgattcagttcagttatttatagctgtagtagttcttagtttgtcttcctgccaggtggttgtcttgcagatatgcgtgtgcagtttttttttctttttcttgagcagattatgcagtagatatgaagtttttaaacttggggaaattcgttgagtatgtactatatgtagatatatagtcgacaaatttgtagacttttagcgtgcaatttacttaaagcaaagaataaaaggtcaactgaatctctggtgaatatcagttggcatcgtcaaatttctccaattctcctagttttatgagaaaatctcatcttttagtcagtctttaaacagtttggatgcacgtgcattaggtttgatgcacgtgctaagagaagttcttgacttttatgcgcattttcttctggaatttggagtgttgaatggcaacattttgacttcactataattatctcttcgacattatctaaaaaaaaactctcttggagtttgcattgtggaaaacaatcccataagttagactaactttaatttgtatggttttgcaatctttcaccagttggagtatgagctgcagaaggaggtctccaacatcatgatccagagctacattactagcatgcgtcgagagttcgagacaaagttatgggagaatcagaactgcattagtaccttgaacaaaaactggaaggaaaagatatctaagattgccgcactgcgagatgaactcagtactatttacagtgttgtatcagcttcagaatctggtgtgttttcttctcatggtagtcacgaaaaggtcgaagagctcaactttttgaagatgaaggatgataacgagtcatcaatcacagagagaactacagattcaggtgagctcatgtttgatatcccggacttctcactcttaaagcacatgccaagtgaagaagtcacaaattttctaaaatcagaatggctgaagttgcgaagacagcacgagtctgaattgcatgagaaaacagaagagttgtttaggctaaaaagggaatttgcgaaagatatagctttgttgccttctaggaaagagagagaacttgaaatcatcaaatcaaagttgcttcaaagcatttcaaaattggatgaaatcaccttgagagaagataacccttattgtgataattatgatgatgccgaggtttgcggatttgaggacagaatcggctctttacttcatgaaaatgaacaactacaaggtttgctagctgacaaaaaaatggtggctaaacatctgtctttacaagtattagatgcagagaggaaaatggcacagcactcgttgtccgagttaaaacttgtgaaacaagttgagaagcttagccatgaacttgaagatttaaagattgagagccacattaaagatttattggagctgtcgacattaagagaagtttttgataattatgagaatcatattgatgatgctaatcaggaggagaccttcctcagagagttgcttatagaaaaagaagagcagttgagtattatgtatgaagacagacagaagctaaagtatgaaaacaatcaacttgtagcaattgcaggatcaacattaatgcagcaccatgagcaagtcaacttggttaatgaccttaccaattttagggagaaggtgtgcgagcaagagttgttgatcttagagtccaagagtgagtctaattcaatgaagagtagcttgtatgaggctttgcagcaaattaatgtatgcaagcaagagatacatggtctgactgacaacttaactgccatgtctattgctttggaggaagccaaagaacagaatgcctcacttgatgccaccatccaggaaatgaagaaaacatcggcgccaagcattaacagtcataagggacaagcagggcacctagaatatgcccttgttagtatggagaagttatctaaatcatacagcgattttgaaagcagattggctcaaagtatgaagagaaatgaaattaggtatgtaaattaattaatatccttgaatatttgttatggtcgtttttgtttacttagagcaatactagataagttaggctcacttgtctgactatttgaactcatcacttaatgtattgtaatattctgcatgttagtgaatgctagctaagttaaattgtccacttcatattttggcatatattattcccatgcaggttgactagtataacttgccaattattgagttctttgttttttattcccatgcaggttgactaatataatttgccagtttaacccactggtgcagcaagttgctgtattaaagaaaaaagaattctggtataaacagatactcgagattaaatgctctaatctccagaaagcagaagctgaggtttaaccttctctttatgctctttctattttctgttcatttcacttttaaacttctaagaaacattttttccttgaaaactatagttgattttcatcttctaggcacgaagtagtgatcacatgatgcttgaattttatcgaaaataataagcgaagtatatagagactaaagcacaataatatttattttacaaaataaagttttattcatgtgacaatagcattcattcattcaacctttttaccattgtgacccaggttgatatacttggggatgaagttgatgctcttcttagtattcttgggaagatctacatagcacttgatcattattctcctgtattgaagcattatcctggggtaagacaattaatccataaatctcctgacaacaatttagcactttttgttgatgtcctgaatatgcttttcttttctgtcaagattcaatataaagacgtttttcctttcatattgctttcaggttacagagattttgaatctggttcagaaagcattgaaaggagaaagtatttagtaggatcaggaaaaaccttaacactattcatgaaaaggcttgacatggatagaattatgactgagatttttcaatacttcagttacctgattgccgtaggcaaattttttttgcattgtctcacagggaagaaagattaagatcttaacacacaaaggcaaagcatagtaaactagctagctaccattgttccattgatagggttaccaaccgcatctgttgatttatatgattgtatcagtgttcagttagtggtgttgtgagtacagtagtacaggcttatagggtctatttgtattggttgtagtttcaggtttcactgtgagtagtttacttgtctgcatgcaacaaagtgcagcttgctatagttatagatggttttgtcagtgatcttttttagatggctttgtaaagattctttgtggaatggaaggcagtaggtaggagttgtaatatcaggtggctaattaatgaaatctgtgtattcagttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0612300, RefSeq:Os12g0612300