Os12g0616000

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0616000| Description = Similar to Kinesin-like protein KIFC3| Version = NM_001073811.1 GI:115489583 GeneID:4352796| Length = 2874 bp| Defi...")
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Gene Name

Os12g0616000

Description

Similar to Kinesin-like protein KIFC3

Version

NM_001073811.1 GI:115489583 GeneID:4352796

Length

2874 bp

Definition

Oryza sativa Japonica Group Os12g0616000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26357452..26360325

Sequence Coding Region

26357965..26358780,26358968..26359093,26359185..26359348,26359430..26359467,26359561..26359776
,26359875..26360036,26360103..26360323

Expression

GEO Profiles:Os12g0616000

Genome Context

<gbrowseImage1> name=NC_008405:26357452..26360325 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26357452..26360325 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttgcttatggacagacgggcactggtaaaacatttacaatggaaggaattgaagatgctcgaggggttaactacagaactctagaggaactctttcgaattaccaaagaaagacaaggcctttttcagtatgagattactgtcagcgttttggaagtgtacaatgaacaaattcatgatttgctgctgacagggactcagcctggtgcaacagccaaaaggctagaagtaaggcaagttgcagaaggagttcatcatgtgccaggacttgttgaagcacgtgttactaatatgaatgaggcctgggaggtcctgcaaactggaagcaaagctagggttgtcggttcaacgaatgctaatgagcatagcagccgatcacactgtatgcattgtgtaatggtcaaaggagaaaacttgatgaatggggaacaaacaaaaagtaaattgtggttaattgaccttgccgggagtgagcgagtggcaaagacagatgctcaaggagaacggctgaaagaagctcaaaatattaacaagtccctttctgcacttggagatgtcatatctgctcttgcaactaagagccagcatataccgttcaggaactcaaagctaacgcacttgctgcaggactcgctaagtggagactccaagactttgatgtttgttcagatcagcccaaatgagaacgatgtgggtgaaactctttgctcgctaaactttgcgagcagagtgcggggaatagagcttggacaagcaagaaaacaagttgatgttggtgaactgtcaagatataagctgatggctgggagagccaaacaggacagtaagaataaagatgctcagattaagagcatggaagaaacaatccaatcgcttgaagcaaagaacaaggccaaagacctactcactatgaatctccaagagaagatcaaagagctggaagcacagctgctggttgaaaggaagatagcgaggcagcacgtcgacaacaagatcgcccaagatcacctgcatcagcagcagcaaagcaagaagccagaaaactcaccgtgcccgacgagaagccccatggcagagaggaacctcaactccacagcagagaagccagtgacgttgctcaaagacctcggaatcgcgaggcagatgttctccgacagcaacacggacacctacagcatcaaccacctgatgtccatgtcgtcggagaaggagaacaaccctgccggcggcgcgcagcctacaaaagccagaagagtctcactctgcggcggagctcaccagcagccggctgctcctcctcgccggggctcgctgatcccgctgccgcggcggaactcactgatgctgcctctaccattgcccaagcccgcaacacccgcggcggcggcgtcgccgctggacatgatcaccgagcagtgctcctcgccgctggtgatcgcccccaacgacatcaggggtggcggcggcggcggcggacggaacaagaggatcatcaacagcatcctgcgtcgcagcctgcagaagaaggtgatcatcaggccgccactaatggcagctcatcagtcagggaggagggccggcgccggcgtggctggtacaaccacccatggcggcggcggcggcggggtgatgagagcgcggcgtgtgccggtgagcggcggccggggaggaggaggggtgcagcacaacagggagaaggagagagggtggaacaacgggaccagcctcaggcagctcaactag</cdnaseq>

Protein Sequence

<aaseq>FAYGQTGTGKTFTMEGIEDARGVNYRTLEELFRITKERQGLFQY EITVSVLEVYNEQIHDLLLTGTQPGATAKRLEVRQVAEGVHHVPGLVEARVTNMNEAW EVLQTGSKARVVGSTNANEHSSRSHCMHCVMVKGENLMNGEQTKSKLWLIDLAGSERV AKTDAQGERLKEAQNINKSLSALGDVISALATKSQHIPFRNSKLTHLLQDSLSGDSKT LMFVQISPNENDVGETLCSLNFASRVRGIELGQARKQVDVGELSRYKLMAGRAKQDSK NKDAQIKSMEETIQSLEAKNKAKDLLTMNLQEKIKELEAQLLVERKIARQHVDNKIAQ DHLHQQQQSKKPENSPCPTRSPMAERNLNSTAEKPVTLLKDLGIARQMFSDSNTDTYS INHLMSMSSEKENNPAGGAQPTKARRVSLCGGAHQQPAAPPRRGSLIPLPRRNSLMLP LPLPKPATPAAAASPLDMITEQCSSPLVIAPNDIRGGGGGGGRNKRIINSILRRSLQK KVIIRPPLMAAHQSGRRAGAGVAGTTTHGGGGGGVMRARRVPVSGGRGGGGVQHNREK ERGWNNGTSLRQLN</aaseq>

Gene Sequence

<dnaseqindica>1546..2361#1233..1358#978..1141#859..896#550..765#290..451#3..223#tatttgcttatggacagacgggcactggtaaaacatttacaatggaaggaattgaagatgctcgaggggttaactacagaactctagaggaactctttcgaattaccaaagaaagacaaggcctttttcagtatgagattactgtcagcgttttggaagtgtacaatgaacaaattcatgatttgctgctgacagggactcagcctggtgcaacagccaaaaggtatgtttcttgtgaattctaacagcaacatgcgagaaccaatatatcatggcacttccttcacaggctagaagtaaggcaagttgcagaaggagttcatcatgtgccaggacttgttgaagcacgtgttactaatatgaatgaggcctgggaggtcctgcaaactggaagcaaagctagggttgtcggttcaacgaatgctaatgagcatagcagccgatcacactggtcagtcccttaaattcatacttttctttgacacatttttcatccatttatgctaaagttgtaattattaaatcctaacctcgttaattctgtatcagtatgcattgtgtaatggtcaaaggagaaaacttgatgaatggggaacaaacaaaaagtaaattgtggttaattgaccttgccgggagtgagcgagtggcaaagacagatgctcaaggagaacggctgaaagaagctcaaaatattaacaagtccctttctgcacttggagatgtcatatctgctcttgcaactaagagccagcatataccgttcaggttgtgaattactgtcctttaagtctaatttttcattagtactgtcttatgagcccagtgcccactgacatatttattgtcccaaattgacaggaactcaaagctaacgcacttgctgcaggactcgctaagtatgtagaactttttccttgagtggtaggatttacatctattctttatttttttggtaataatgtttgcaaacaaaacaggtggagactccaagactttgatgtttgttcagatcagcccaaatgagaacgatgtgggtgaaactctttgctcgctaaactttgcgagcagagtgcggggaatagagcttggacaagcaagaaaacaagttgatgttggtgaactgtcaagatataagctgatggtacagtagtactatgtcaatatatatacttttagtaagatcttagattccatctttttttaatctgaattcatactgctcgttttgctaggctgggagagccaaacaggacagtaagaataaagatgctcagattaagagcatggaagaaacaatccaatcgcttgaagcaaagaacaaggccaaagacctactcactatgaatctccaagagaaggtacttcaagcatcttttatcttcggctgcttaattggttcctccagcgcctttgcaatataaacaccttaatcagttaatcaccaattcaccattactttctaataaagatgttgtcctcatactttcatgaatgaagaattcacatgcttacagttatttacttgctctctcattatatatccagatcaaagagctggaagcacagctgctggttgaaaggaagatagcgaggcagcacgtcgacaacaagatcgcccaagatcacctgcatcagcagcagcaaagcaagaagccagaaaactcaccgtgcccgacgagaagccccatggcagagaggaacctcaactccacagcagagaagccagtgacgttgctcaaagacctcggaatcgcgaggcagatgttctccgacagcaacacggacacctacagcatcaaccacctgatgtccatgtcgtcggagaaggagaacaaccctgccggcggcgcgcagcctacaaaagccagaagagtctcactctgcggcggagctcaccagcagccggctgctcctcctcgccggggctcgctgatcccgctgccgcggcggaactcactgatgctgcctctaccattgcccaagcccgcaacacccgcggcggcggcgtcgccgctggacatgatcaccgagcagtgctcctcgccgctggtgatcgcccccaacgacatcaggggtggcggcggcggcggcggacggaacaagaggatcatcaacagcatcctgcgtcgcagcctgcagaagaaggtgatcatcaggccgccactaatggcagctcatcagtcagggaggagggccggcgccggcgtggctggtacaaccacccatggcggcggcggcggcggggtgatgagagcgcggcgtgtgccggtgagcggcggccggggaggaggaggggtgcagcacaacagggagaaggagagagggtggaacaacgggaccagcctcaggcagctcaactagagtgatactccctctatcccatagtataatggattttgaaaagaagtgatatatctaggactatgaatgatagtcatagatacgtcgcgtccctctagaatcccttatattatgggatgaagggagtattatgcatcgtcactcagctcagacgggtgagtgaaggagagacttatagaattgggagtagttttaggagggtttcaggtgttgatacctcattagattgtgtggtgtcgtgggtgtgcttgagttctcgagtattgtgagagaactctttgctgatgtttcattgtgttcatagattgatgattggattggttgatctggctgccagatcttagattgctggagtgtttgatctggctgtcagattctattttacgaaactgtttcttgctcggatcaggtttacaagtgttttccagttcaagtttgatcaaattctgtaatgatctcaagtgttttccagttcaagtttgatcaaattctgtaatgatctcattttctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0616000, RefSeq:Os12g0616000