Os12g0619000

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0619000| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001073827.1 GI:115489615 GeneID:4352813| Length...")
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Gene Name

Os12g0619000

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001073827.1 GI:115489615 GeneID:4352813

Length

5406 bp

Definition

Oryza sativa Japonica Group Os12g0619000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26595693..26601098

Sequence Coding Region

26596015..26596178,26596387..26596888,26597151..26597264,26597400..26597627,26598479..26598715
,26599669..26599752

Expression

GEO Profiles:Os12g0619000

Genome Context

<gbrowseImage1> name=NC_008405:26595693..26601098 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26595693..26601098 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatttcagccaagtggattaaatcacttgttgggataaaaaagcatgaaaaagcacaaacttctgaaagcagtggagtgaggagctctactgcgcagttgctacacaagcgaaaacattctattgatactgaaagtgctgctgcagtcgaagaactcagtgtacaaactgagccattggcatgtgacaccaacattcaggcaatatcaaatatcacctcctcacccggtacaactcttcaagtatctcagattgaattggatacaagggagaatcatgctgcaatagttattcaatctgcctttcgagcgttcttggctaggagggctttacgagcattaaaaggattagttagactccaggctcttgttcgtggccatgctgtccgaaagcaagcagcagaaacacttcaatgtatgcaagcattggtaagagctcaagctcgtgtcagagcaagacgagttcgaatttctttggaaagtcaagtgacgcaaaagaaggcttcagaacagaatgttcacgaggaccatgtttgggaaattgaggaacgctggtgtgacggtattggctcagcggaacaaatgcaagctaaagtattaaaaagacaggaagctgctgctaagcgggaaagagcaatggcatacgctttaacacaccagtggcaagcaggttccaggaaacagaaagcagcaaccctccaagggcttgaggtggatgagaatcagtggagccagaattggttagagaggtggatggctgcacgcccatgggagaacaggttgcttgatactaatgccaaagagagtgctccaactggtgatgataaccatgctgatgaaaatgaggccaaggctccgaacaaaccaaaaggaaaagtgtccatttctaccactcatccgaatggctcaaacaagaagaacggtgcaaatcataagaagtcgcattccgatataagtggctcttcatcagggcaatctgcaggtgttctgcccacaaattctttgggatcatccaagctaaaaccaaagccatcagatgaaatctctgaggaagtcaattctcaaccttcgaatttggcttcgcggtccacaagtaatccaaaagagaggccaacacaagtgaatgcttcatccaagaagagactgtcactgcctaacaatggaacaatgggtgggggcgtaggaaaaggcgcaaccaacggcaggacaaaccaatccatgagctccaagaatgcagcaaaaggatcatccaagctggaatcaaagcagcaacaacgaccaaaccctcctaacacgactgtgaaacgagttgaggtaaaggcctga</cdnaseq>

Protein Sequence

<aaseq>MGISAKWIKSLVGIKKHEKAQTSESSGVRSSTAQLLHKRKHSID TESAAAVEELSVQTEPLACDTNIQAISNITSSPGTTLQVSQIELDTRENHAAIVIQSA FRAFLARRALRALKGLVRLQALVRGHAVRKQAAETLQCMQALVRAQARVRARRVRISL ESQVTQKKASEQNVHEDHVWEIEERWCDGIGSAEQMQAKVLKRQEAAAKRERAMAYAL THQWQAGSRKQKAATLQGLEVDENQWSQNWLERWMAARPWENRLLDTNAKESAPTGDD NHADENEAKAPNKPKGKVSISTTHPNGSNKKNGANHKKSHSDISGSSSGQSAGVLPTN SLGSSKLKPKPSDEISEEVNSQPSNLASRSTSNPKERPTQVNASSKKRLSLPNNGTMG GGVGKGATNGRTNQSMSSKNAAKGSSKLESKQQQRPNPPNTTVKRVEVKA</aaseq>

Gene Sequence

<dnaseqindica>4921..5084#4211..4712#3835..3948#3472..3699#2384..2620#1347..1430#agaaaagcacacagcaaaaaaaaaaagaaatccaaaagggtggagttggagctcaggaatccatccccagacagaggaggaggaggaggaaggggtggtcgcctcgccaagtcggtggcgattttgacccctcttcgccgctggcaaggtggagtttctgttcatcctctcccattctccccaagaattggtgcctgttcttgcccgaatttggtgtggatttgaggatatcttgggaatccactgaattcattagttgtttgagaggcggctgtatttttggtttgcttggcgttgaaattacctcgctttacccaaaatttgggttcacatttcgcccaagattttgcatgtccttcagttggtttctgcaaaattagccctcactgtggctctttttttttttttgccgacattctgcaaagtttgttagtataagttccaaagatgtgagtttttgtgtgtagtgaagaaagatgtaaactttctttgcggatgtttcttttccctgtttgttgccaatgttcttcagggttcatctcggttagaacctttgcaagattgcagggttggtagtctggagatgaagctcttgactctttggctatctttggtaaatggtggaagattagtgttccagctcatgacttctccttagataatggtgcctcatagctgctactttgaatgtgctatggcgctctttcacattctgctcatgaactccccttccatccctgcttcttttagttctgcctgttaaaagttgagtagtctgatgagattttttgtgcaactgattactggcttgttgtaaggctacttcgttgcagaaatactttgctgtaggcagtagctattgtttatggtaaaccgtggaatgatgcaaattgatttgtatgttcagcaatgccacctccttgtgtaagaatttacaaggactgttggaaaagttgtgcttttttttgtcatctttgctgcttttttttgagtggataatttgtgcaatatcgggagaaaatgggtgatgatgtcgattggcgttacttgatgagcttcggcggaagtgctgtggattgttcttggtggcatgtgtaaattgagcagccacgttttaattacttagttgttctaatcaatgagttagataagatgttatgactacctccttttcttggttcatttgacattttgaacgctattgtacactaccgaaaattcctcatatttgtgatccattttcagtacaatattcattattttgtactacttcatttgacaatgatcttctcatccacaggtattaccgtgctaactggttaaaggagaagggttgaaaggccaatatgggcatttcagccaagtggattaaatcacttgttgggataaaaaagcatgaaaaagcacaaacttctgaaagcagtggagtggtaagccgaatgatattcagtatggttgtttgctctgcaatgataacgaattgtttataacttcatatttggtacatgtgagtatgtgacatgtagtattttgtttaagtcatttcatgttttgccctgttgtgagtggaagaatatgatatgcgtcatatgtatgtttgtctttccctgacaaaacatgaggaatctttaagaatgatatgaaaaatagatgttttacctaaactcactggaagacagtcggtgctgttgttgctgactgttgatatgttgttatcatctgacatatcacttaagggttaccgctacactattctcttgttcattatcagaagtgtcacagatatataaatcttgtttgccatgtgtcatgtagctaatgcctaatggtagcacctttttctgttcattgaccttgccaaattatttctgttgctagttgccgccatcaacactgtaatgttttcatccttctcacattcaccatatagtggacaggctgagtttaaaaacattttacaacaaatttatgtacataaatgtgactaaatcgaatttatttcttctgaaatttcttgctttataataaatctcaatataaatcaattcagtctaaactattgccactgaaacagttaggttattttctatatattgcctttttatgtactttgtccaggaatttatataaaataaccactcaaaaatattgtatatgaaatagcagaagatctggtatgagttatatcttgtgtattaaggtgttcagtgctgagtcagtgagtctgatagcatggccagttaagcaaactattgcattgctatattttgatttcttgtactccatatttggctcactattgccacacatttacatattaagcattgttattttttctactgtattcatcattctttaagaccctactttgtgctaattgtagaggagctctactgcgcagttgctacacaagcgaaaacattctattgatactgaaagtgctgctgcagtcgaagaactcagtgtacaaactgagccattggcatgtgacaccaacattcaggcaatatcaaatatcacctcctcacccggtacaactcttcaagtatctcagattgaattggatacaagggagaatcatgctgcaatagttattcaatctgcctttcgagcgttcttggtattatactccatcttatattaccatattatattgctattactgagacttagaaaagcacgggatatattgcaattcatgtgccacaaacttaaagtgaggtagggaccaagtaatgctttgatgctaggaaaaaaaggaaagactgttgtgaatgctgtcccttctattatgtgtgacaaagttctggataatttatcacctgtgaagatggtcagtagtaccacttggctgctgtccaattatgtgacgttacaagatatatctgtaaaaattctcaatttttgttaggccttgatttgaattttcccagatgaacatttaaatctagtaggagaaactgctgggatttacaggaacctctgcagtctcgtaaataaccatcagattcttcacggaatagatgctattaacatgatagcatggacaacttttagtctctgtcatatataagacaaaatgttccagatgataatatttaaaagtaaacaaaaggactaatgctagtatgctactggtcattagatattcagtctttgttttgatctcctgggagtaaagttttatagattgttggatcgatctctgcatcttttttttttgcatcagtacacaatgtgatctctctctttttttgttttaaataaatgagtcttagagcctagctaccttcacatgaactcatcttttcatgttttaggtatgggctgaccagatatgcacctatatgaagaatattcaaaataagtagtaacttaaaatacgacctaattcatgattttgtggtattcttctcccatatgtatgtggctttgcggcactctcattttttcttttgtcatatctaccaggctaggagggctttacgagcattaaaaggattagttagactccaggctcttgttcgtggccatgctgtccgaaagcaagcagcagaaacacttcaatgtatgcaagcattggtaagagctcaagctcgtgtcagagcaagacgagttcgaatttctttggaaagtcaagtgacgcaaaagaaggcttcagaacagaatgttcacgaggaccatgtttgggaaattgaggtatgaaatggtctgtgaatgaatggcgctatatgcttccgtatagtttgttttaaactgaatatgaagggtgttatgtttattttaaactgaatacttataagtgagtgataattcaccaagaatggcatgcaggaacgctggtgtgacggtattggctcagcggaacaaatgcaagctaaagtattaaaaagacaggaagctgctgctaagcgggaaagagcaatggcatacgctttaacacaccaggtaagtctatgctagcattctaacagaaatctgtgtacagacatagaaatgttggtctttacatgttgaaattagcttgagggtcaagatctgcaaagtctttttgattctttacttaattcacatccgttgtcaactcttaatgttacaagcttgtttggtagaagaaaaattgcttaagactagtaacagtaagtgtgctaattggtgatttcccttagagcggcagcaaggtgtgtaacacctatttttgcttttgcagtggcaagcaggttccaggaaacagaaagcagcaaccctccaagggcttgaggtggatgagaatcagtggagccagaattggttagagaggtggatggctgcacgcccatgggagaacaggttgcttgatactaatgccaaagagagtgctccaactggtgatgataaccatgctgatgaaaatgaggccaaggctccgaacaaaccaaaaggaaaagtgtccatttctaccactcatccgaatggctcaaacaagaagaacggtgcaaatcataagaagtcgcattccgatataagtggctcttcatcagggcaatctgcaggtgttctgcccacaaattctttgggatcatccaagctaaaaccaaagccatcagatgaaatctctgaggaagtcaattctcaaccttcgaatttggcttcgcggtccacaagtaatccaaaagagaggccaacacaagtgaatgcttcatccaagaagagactgtcactgcctaacaatggtaataaatcttctatcttttattggcactgcatctcctgaaacacttttattcagagaactattgaaagccattccgaactctcctgcaagagatcattcttttctagctagaaatttcagttctagttgacatgctattgaagaaccaagtataaacagttcatactgaaacagcatctgattctattctactttcacttgtgcaggaacaatgggtgggggcgtaggaaaaggcgcaaccaacggcaggacaaaccaatccatgagctccaagaatgcagcaaaaggatcatccaagctggaatcaaagcagcaacaacgaccaaaccctcctaacacgactgtgaaacgagttgaggtaaaggcctgagaaagtgaggaatccacccaactcccatttcattcagacgcttggtaatagccctgttgtcatgtgtgctgttgcatccgtgtatataaaccaagaaaagagagagagaatcttgcatctacattgatgccatgcttcatgtttctattgtgcaatatttatgttgtcagtattttctcttcgcgcttctgcagttctgctatatttctgtaagttatcttccttctactataaccagagaactgtatgtgcaaaactgtgaaaatatgcacagtacaataaaccatatgccctattgtttcatgacatggtcttcagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0619000, RefSeq:Os12g0619000