Os12g0623600

From RiceWiki
Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0623600| Description = Protein of unknown function DUF1637 family protein| Version = NM_001073842.1 GI:115489645 GeneID:4352829| Length = 2...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0623600

Description

Protein of unknown function DUF1637 family protein

Version

NM_001073842.1 GI:115489645 GeneID:4352829

Length

2579 bp

Definition

Oryza sativa Japonica Group Os12g0623600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26856374..26858952

Sequence Coding Region

26856860..26856999,26857508..26857711,26857809..26857971,26858091..26858212,26858597..26858864

Expression

GEO Profiles:Os12g0623600

Genome Context

<gbrowseImage1> name=NC_008405:26856374..26858952 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26856374..26858952 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtggggaggggatcgagggggggaggtggccgcgatggcggcggcgtggtggaggaggagaggagtggcggggtggaggcggcgccgccggtgaagaggaggcgggtggcggtggcgccgtcggctggggccggggggagcaggcgggtgcaggcggaggcgtcgccgctgcagcggctgttccgggcttgccgcgccgtcttcaggggcaccggcaccgtcccggcccccggcgaggtcgacctgctctgctccatgctcgataaaatgaaacccgaagatgttggccttagggcagaccaagaattcttcacggctagagatgatgacgaaggaatcccgctcattaaaaacactacattatatgaatgcgacaactttacgatgattatcttcttcttaccacgaaatgcgatcatcccactgcatgatcaccctggaatgacggtgttcagtaaactacttatcggatcgctgcacataaggtcgtatgattgggttgatcctgagcctgccttaagttgtagttcatcgtcgggtgatcaattgaggttggcaaagagagtggtgaatggcgtttttacagcaccatgtgatacatcagtcctgtatcctacaacaggagggaacatgcaccggtttcgagctattgcgccgtgtgcaattctcgacattcttggccccccttattccacggaagatggccgagactgcacatattaccgcgctattccctactcacgtcattcggtgaaaaatggcgcggccgatcagctcaccggagtcgacgaagaaggccatcgcctctcatggctaacggagaccattccgcggatgctgaggatgcgccagatccggtacggcggcccgccgatctccgatgacgaatga</cdnaseq>

Protein Sequence

<aaseq>MKVGRGSRGGGGRDGGGVVEEERSGGVEAAPPVKRRRVAVAPSA GAGGSRRVQAEASPLQRLFRACRAVFRGTGTVPAPGEVDLLCSMLDKMKPEDVGLRAD QEFFTARDDDEGIPLIKNTTLYECDNFTMIIFFLPRNAIIPLHDHPGMTVFSKLLIGS LHIRSYDWVDPEPALSCSSSSGDQLRLAKRVVNGVFTAPCDTSVLYPTTGGNMHRFRA IAPCAILDILGPPYSTEDGRDCTYYRAIPYSRHSVKNGAADQLTGVDEEGHRLSWLTE TIPRMLRMRQIRYGGPPISDDE</aaseq>

Gene Sequence

<dnaseqindica>1954..2093#1242..1445#982..1144#741..862#89..356#cacctctcctcctccacgcattgcttcttgattcttgattcttgctgcttcttgcttcttgttgctgttgttcttggttggatctttgatgaaggtggggaggggatcgagggggggaggtggccgcgatggcggcggcgtggtggaggaggagaggagtggcggggtggaggcggcgccgccggtgaagaggaggcgggtggcggtggcgccgtcggctggggccggggggagcaggcgggtgcaggcggaggcgtcgccgctgcagcggctgttccgggcttgccgcgccgtcttcaggggcaccggcaccgtcccggcccccggcgaggtcgacctgctctgctccatgctcggtgagtcccctctctctttctttcatgcagttcatgttccagtttatcatgcagatttagctggattttttttatttgttcgtgcatgcaacaatctagtagtaagattactggtttcgacatgttttgttgaattgtagttgatgatgtgtacagtttttttttttggttgggtatggatttgcctgcagaaattgttcagatgaaatgttctgaactttcttcctttagcacatgttaattatcacctggtagcaacggatagccttttgtcctaacaaaataaatattatggcccatgcctatacagtatatgtgggtagtttgtgtctgtttgatgagctgaattaactgaatttgaatcgcttgtgatgctatttgcagataaaatgaaacccgaagatgttggccttagggcagaccaagaattcttcacggctagagatgatgacgaaggaatcccgctcattaaaaacactacattatatgaatgcgacaactttacggtaagtagcaggcagtgcacgaaactaactgaattcaagatttaccacgatatgtttttctggtatcaaaatggctcatgtctaaaacaaattttctaacattcttcttaccgtgccagatgattatcttcttcttaccacgaaatgcgatcatcccactgcatgatcaccctggaatgacggtgttcagtaaactacttatcggatcgctgcacataaggtcgtatgattgggttgatcctgagcctgccttaagttgtagttcatcgtcgggtgatcaatgtaagcttttgaacaattcgacactttttaacggtcgtctgtcttcaccatcatgcatcctccgccatactgatattggtagagttcattgttgcagtgaggttggcaaagagagtggtgaatggcgtttttacagcaccatgtgatacatcagtcctgtatcctacaacaggagggaacatgcaccggtttcgagctattgcgccgtgtgcaattctcgacattcttggccccccttattccacggaagatggccgagactgcacatattaccgcgctattccctactcacgtcattcgggtaagtagcaaattctgcagtatttattttgcagaacattggtacatactatttttatagtttggaaatttgagtaatagttattttgacttgttgctgctttaacatgatctaagaggctaaatgtacggtttaggcattgattacttgcaagtgtgcaatgtatgcctaattgttagcctatcaaatcagtagtttggcataggagacgcccactgaataaggaaagaggttttgtttgttaaattaacaaccaacagatagctttttgtgtatatgaatatatgatattgccgtactccacttgcaacatgtcctcttgattggtgttgcgagcacacggttttgagcttacctgcatgataggttccttgacctgttgaccattggtccataattgcaccaaaatttcctaaatccacttaccctcatcattttcacatctattacctgcatatgttactgcactcgagacttaccgaagctgaatttgcttttgtgtcgacagtgaaaaatggcgcggccgatcagctcaccggagtcgacgaagaaggccatcgcctctcatggctaacggagaccattccgcggatgctgaggatgcgccagatccggtacggcggcccgccgatctccgatgacgaatgaccgccggcttgtcctgatctgaaagagtgatattccgacatggacggccagcccagctgtgaatccgtcgacgtctaaccatgtagtagacagcagatagccatagatgcaaatgcgaatcaatcatgcagagttgagctttcagttcttgcatgcctgatgctgtctttcagtctcagtgatgcccttttcttaatctttggtcagtagttcgttcagtacttcagtacatgtatgcgtagactccaatatttcagttatgttggatgccctttttgtattgaaaagtaagaatcgatctattggggttaaaatgtaagggagtaaatttagacattctctctcttcttttaatttttcagaattgtaaagtatatggttgggatacgactgataaaccgtataacttttctaagaaggcaactactccctcatttccaaattgatcatgtatcaagaccaagaaaaatttaaatcacatcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0623600, RefSeq:Os12g0623600