Os12g0639100

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0639100| Description = Major facilitator superfamily MFS_1 protein| Version = NM_001073918.1 GI:115489797 GeneID:4352914| Length = 3835 bp|...")
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Gene Name

Os12g0639100

Description

Major facilitator superfamily MFS_1 protein

Version

NM_001073918.1 GI:115489797 GeneID:4352914

Length

3835 bp

Definition

Oryza sativa Japonica Group Os12g0639100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27633863..27637697

Sequence Coding Region

27633924..27634361,27635925..27637067

Expression

GEO Profiles:Os12g0639100

Genome Context

<gbrowseImage1> name=NC_008405:27633863..27637697 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27633863..27637697 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgcgctcccggtggtcggcgctggcggcgagcgcgctcatccagtgcttcgcggggagctcctactgcttcgccgtctactccccggcgctcaaggcctcccagtcctacgaccagtccgccctcgacaaggtcgccttcttcaaggacgtcggcgccaacgccggcatcctctccggcctcctcgccgcatgggcccccgccggccgccgccgcccctggctcgtcctcctcgccggcgccgccctctgcgccgtcggctacctccccatctggctcgccgtcacgggggtcgccccggcgccgctccctctcctctgcctctacatgctgctcgccgcgcaggcgcagaccttcctcaacaccgccgatgtcgtcaccgccgtcgagaatttccccgatcgacgaggcaccgtcatcggcatcatgaagggctttctgggattaagtggagcaatactggtccaagtataccgcaccatccacattgctcccagcactttcatactgatgttggcgatattgcccactgccatcaccctgctgcttatgtattttgtcgatgtccaccgttctgatcatcaacggtacaacaagaagttcatggatgctttctccctcattgccattactgttgctggttatctaatgatcatcataatctgtgaccaagtattgaagataataagttcagctgtgcagactgtttgctttgtgatactcctactgttggtcctgtctccagtggctattgctgtgaaggcccagaagacagaatcaatgaagcaagaagaagaaaccagggatcaagctgaaagaatcggactactccaagagcaaattagtacaaatgccagctccagtagcgatgagcgatgtcaagaactgtcgacaggcaaagaaaacatgaatctggtgcaggcaatgtgcaagctgaacttctggctgctgttcctagcaatgtcctgtgggatgggatcagggcttgcaacggtgaacaacatcagccagatcggcggctccctcgggtactcgaccaaggagacgagcacactggtgtcactctggagcatctggaacttctcagggaggtttggtgccggctacatatccgaccacttcctccgttcgcggggagtcggtcgccctttcttcatcggcgtcacgctcctggtcatgagcttgggccacgccatcatcgcctccggcatcctggcgtcgctctacgtcgggtcggtgctcgtcggtctttgctatgggtgtcagtgggcactgatgccgagcatcacgtcggagatattcgggctgaaccatttcggcaccatcttcaacgtggtggcggtggcgagccccgtgggatcttacatcctctcggtgagggtggtgggttacatctacgacatggagtcgccgccgggagctcgtgcctgctccggtaaccattgcttcgttttgtcgttcgtcatcatggcgtgtgtctgcgtggttggctctgctgtcgccttcatgctcttcgtcaggacgaggaggttttataaacgggttgtgtacgccaggttgcaatcttttctatag</cdnaseq>

Protein Sequence

<aaseq>MASRSRWSALAASALIQCFAGSSYCFAVYSPALKASQSYDQSAL DKVAFFKDVGANAGILSGLLAAWAPAGRRRPWLVLLAGAALCAVGYLPIWLAVTGVAP APLPLLCLYMLLAAQAQTFLNTADVVTAVENFPDRRGTVIGIMKGFLGLSGAILVQVY RTIHIAPSTFILMLAILPTAITLLLMYFVDVHRSDHQRYNKKFMDAFSLIAITVAGYL MIIIICDQVLKIISSAVQTVCFVILLLLVLSPVAIAVKAQKTESMKQEEETRDQAERI GLLQEQISTNASSSSDERCQELSTGKENMNLVQAMCKLNFWLLFLAMSCGMGSGLATV NNISQIGGSLGYSTKETSTLVSLWSIWNFSGRFGAGYISDHFLRSRGVGRPFFIGVTL LVMSLGHAIIASGILASLYVGSVLVGLCYGCQWALMPSITSEIFGLNHFGTIFNVVAV ASPVGSYILSVRVVGYIYDMESPPGARACSGNHCFVLSFVIMACVCVVGSAVAFMLFV RTRRFYKRVVYARLQSFL</aaseq>

Gene Sequence

<dnaseqindica>62..499#2063..3205#gcgtgtcgacgtgtcctactcatccacgccacgtaaccaattccatctccggccgccgccgatggcctcgcgctcccggtggtcggcgctggcggcgagcgcgctcatccagtgcttcgcggggagctcctactgcttcgccgtctactccccggcgctcaaggcctcccagtcctacgaccagtccgccctcgacaaggtcgccttcttcaaggacgtcggcgccaacgccggcatcctctccggcctcctcgccgcatgggcccccgccggccgccgccgcccctggctcgtcctcctcgccggcgccgccctctgcgccgtcggctacctccccatctggctcgccgtcacgggggtcgccccggcgccgctccctctcctctgcctctacatgctgctcgccgcgcaggcgcagaccttcctcaacaccgccgatgtcgtcaccgccgtcgagaatttccccgatcgacgaggcaccgtcatcggcatcatgaaggtcaattatccattcccctaatccatcctctctctctctctctctccagatacaacctctctcatcatttctttaattaattcggttctttctaattaggcttataataaaaaggatcaaaataaatgaatagtactccagtaggcaaaagccaaaagcatacagattattattgaacaggctgctaccagcctaccaacaaccaacccaactgtggctcttccttgtgagatactattactctgtcctcttctcgaacactcacttgtttaagatgggtccctatgaatttcgactacatacatagtactggatgtgttgctgccttgatgcctcaaagcaacaaccacattttttttatgtgtcctgatcctggatgttgttgactttaattttggagcagagcagagcaaatagaatatcatatgggtagatcacaggaacttatagtgaaaaaggagtgctccagtttttattatcatgatgaacagcacaccagatataaggagggaaaagaaagaagagaacatcaaagactgaaaaaaaaacatgtattgtccactgtgttaattgaatcttgtgtgttttgttctttctagatgacattccagagtattgtacatcaagataataagctctaccgtcttcaaagaaaaacaaaatctttaccttttcatcccaaataatttcccttccttcttaccagttggttagcaaagcatgcgggtaaatttcaaggaactttgactcattgttgtggggggtgtcccaaatcccttttatggtaagccaaactcttggagtagtacttccttcacatagctcagtggtgtactaggccccaaaatttcaggttctggagtctggagtctgcaccaggataaattaactccatgaatgagtaatcgcaagctttaacggtttactccatttacgtgaggattaccagtttaatctgtaaattaaggagtttgtgggatataggaaatttgtgtactgtgctcagaaattattgcttccaaaaagacagcatgactgatgttagagtgctacaaacgtgtaggtaactactcctatttcagaagaacgacatctggtccctgctgagccatcagttgcaatcatcccatgcctgtctttttgttggattcatccttttcaatatttcatgattcattgacatgcttcctgtggctagtaagcttgatttacctcctgtcactaatttcccaaatattaattaatggaaacgtctgaataaagcttgtttgcatcatatatcttttggtattgccttgaggttttatctaattttatcgcggaatacaattatgtgaacttctgcacgtgcattgctctattagcctaacttgccttttatttgcttgagaacatggaaatctgaagtctcatttatttgtgtataatattttaaacctgaatccctgtacagaaaatgatttaggcctgaaactcattttatgctataagcaccatgttctgttctgttgcacaagtgtagggagatcttaaattcattttttttctgtacttttcaaacagggctttctgggattaagtggagcaatactggtccaagtataccgcaccatccacattgctcccagcactttcatactgatgttggcgatattgcccactgccatcaccctgctgcttatgtattttgtcgatgtccaccgttctgatcatcaacggtacaacaagaagttcatggatgctttctccctcattgccattactgttgctggttatctaatgatcatcataatctgtgaccaagtattgaagataataagttcagctgtgcagactgtttgctttgtgatactcctactgttggtcctgtctccagtggctattgctgtgaaggcccagaagacagaatcaatgaagcaagaagaagaaaccagggatcaagctgaaagaatcggactactccaagagcaaattagtacaaatgccagctccagtagcgatgagcgatgtcaagaactgtcgacaggcaaagaaaacatgaatctggtgcaggcaatgtgcaagctgaacttctggctgctgttcctagcaatgtcctgtgggatgggatcagggcttgcaacggtgaacaacatcagccagatcggcggctccctcgggtactcgaccaaggagacgagcacactggtgtcactctggagcatctggaacttctcagggaggtttggtgccggctacatatccgaccacttcctccgttcgcggggagtcggtcgccctttcttcatcggcgtcacgctcctggtcatgagcttgggccacgccatcatcgcctccggcatcctggcgtcgctctacgtcgggtcggtgctcgtcggtctttgctatgggtgtcagtgggcactgatgccgagcatcacgtcggagatattcgggctgaaccatttcggcaccatcttcaacgtggtggcggtggcgagccccgtgggatcttacatcctctcggtgagggtggtgggttacatctacgacatggagtcgccgccgggagctcgtgcctgctccggtaaccattgcttcgttttgtcgttcgtcatcatggcgtgtgtctgcgtggttggctctgctgtcgccttcatgctcttcgtcaggacgaggaggttttataaacgggttgtgtacgccaggttgcaatcttttctatagagagagaaacgaaccgattcttttctagcaaatgcttacctatcttttacaagcaacaggatttgatctgtacctgtacgtcagagaatggtagaaagcagaggcacactactttctgctgccatttttttcttgttgaaaagacatcattggactggtcactggtgttatatactactagtacttgtatgtatgcgtagaagtaaaaggaaaataaaacaatgtacagggaagaagctacagaaaacaaacagcatttgcttcgtcagaaaattatagcagagctgacttaacacaaagaaatcagttcgtgcaaccagctggctggggtaattttttcaagggaataggcttggagagctctgccttttatgctgattcagaaagtagagaatagttcagttctaagcacatgaaagctacattgttacagagtggatttgtcagctgacaactgtatataccagctgctttgcccctcgccggatgcggtacaggaggaaaaggcccaggccacagcgagagaaaaggcccagctacaagtatgcaggtccaaaatgggctctgtaatatgggccaaggccgggaaagtgaattcatctaaatagtcatgtcacctaaatagtcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0639100, RefSeq:Os12g0639100