Os12g0105300

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Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Annotated Information

Function

Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Evolution

This gene is conserved in Arabidopsis (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis [1][2].

Knowledge Extension

References

  1. ↑ The Rice Annotation Project Database (RAP-DB): 2008 update. Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,
  2. ↑ Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,

Structured Information

Gene Name

Os12g0105300

Description

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Version

{{{Version}}}

Length

8411 bp

Definition

Oryza sativa Japonica Group Os12g0105300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:259563..260472

Sequence Coding Region

40138313..40138869,40138972..40139293,40140765..40141055

Expression

GEO Profiles:Os12g0105300

Genome Context

<gbrowseImage1> name=NC_008394:40138313..40141055 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40138313..40141055 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq></cdnaseq>

Protein Sequence

<aaseq></aaseq>

Gene Sequence

<dnaseqindica>

GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT TCTTTGTATT T</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0105300, [1]

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