Os01g0968100

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0968100| Description = Root cap family protein| Version = NM_001052050.2 GI:297598397 GeneID:4324013| Length = 1353 bp| Definition = Oryza...")
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Gene Name

Os01g0968100

Description

Root cap family protein

Version

NM_001052050.2 GI:297598397 GeneID:4324013

Length

1353 bp

Definition

Oryza sativa Japonica Group Os01g0968100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44494817..44496169

Sequence Coding Region

44495027..44495748,44495845..44496097

Expression

GEO Profiles:Os01g0968100

Genome Context

<gbrowseImage1> name=NC_008394:44494817..44496169 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44494817..44496169 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacggggcgccgcggtggttgctgcggcggctgccctgttggtggtggtgtgcgccgccgcgcaggcgccgtcgtcgccgaggctgccaagcaactaccacgtcatcaaccccggcaggttcggcaagagggaccagcagctctcctgcaccgactccaatggcaacaaggccgtctgcatggccaagtgcgacaagcgctgccccaaccagtgcatcgtcatgtgtcccggctgcaagaccttctgcatgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggcaacaacttctactttcacggcaagaaggaccacgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacctggatccaggccctcggcatccgcttcgccgaccaccgcctctacatgggcgcccttaagaccgccaagtggaacagcgacgacgaccgcctcgagctcgccttcgacggcgcgcccgtcgacgtccccgccgagctcggcgcgcgctgggagtccgccgccgttccaggcctcaccgtcaccaggaccgccgccaccaacgccgtcagggtgcagctcgccggcgtgctcgacatcatggccaacgtggtgcccatcaccgagcaggactcccgcatccacaactacggcgtcaccgaggaggacagcctcgcccacctcgacctcggcttcaagttctacgacctctccgacgatgtccatggcgtcctcggccagacctaccgctccgactacgtcaacaatctcagcgtcagcgccagcatgccggtgatgggcggcgctcccagctacgtcgtctctgacatcttctccaccgactgcgccgtcgccaggttcggccgccgcgccggcatctccatggtcactggcagggccaactaa</cdnaseq>

Protein Sequence

<aaseq>MARGAAVVAAAAALLVVVCAAAQAPSSPRLPSNYHVINPGRFGK RDQQLSCTDSNGNKAVCMAKCDKRCPNQCIVMCPGCKTFCMCDFYPGVSCGDPRFTGG DGNNFYFHGKKDHDFCIVSDADLHINAHFIGKRNPTMSRDFTWIQALGIRFADHRLYM GALKTAKWNSDDDRLELAFDGAPVDVPAELGARWESAAVPGLTVTRTAATNAVRVQLA GVLDIMANVVPITEQDSRIHNYGVTEEDSLAHLDLGFKFYDLSDDVHGVLGQTYRSDY VNNLSVSASMPVMGGAPSYVVSDIFSTDCAVARFGRRAGISMVTGRAN</aaseq>

Gene Sequence

<dnaseqindica>422..1143#73..325#atctcatcctagctacctcctcgtttgatcgatcgatttctgaagcttagctagccaacgaggtagcgatcgatggcacggggcgccgcggtggttgctgcggcggctgccctgttggtggtggtgtgcgccgccgcgcaggcgccgtcgtcgccgaggctgccaagcaactaccacgtcatcaaccccggcaggttcggcaagagggaccagcagctctcctgcaccgactccaatggcaacaaggccgtctgcatggccaagtgcgacaagcgctgccccaaccagtgcatcgtcatgtgtcccggctgcaagaccttctgcagtaagcatcactagctagttgcaattcatttgaactactgatcgatcgtgacatcgtgtgtgattctctgtgtgaaattatttgattttttcaaagtgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggcaacaacttctactttcacggcaagaaggaccacgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacctggatccaggccctcggcatccgcttcgccgaccaccgcctctacatgggcgcccttaagaccgccaagtggaacagcgacgacgaccgcctcgagctcgccttcgacggcgcgcccgtcgacgtccccgccgagctcggcgcgcgctgggagtccgccgccgttccaggcctcaccgtcaccaggaccgccgccaccaacgccgtcagggtgcagctcgccggcgtgctcgacatcatggccaacgtggtgcccatcaccgagcaggactcccgcatccacaactacggcgtcaccgaggaggacagcctcgcccacctcgacctcggcttcaagttctacgacctctccgacgatgtccatggcgtcctcggccagacctaccgctccgactacgtcaacaatctcagcgtcagcgccagcatgccggtgatgggcggcgctcccagctacgtcgtctctgacatcttctccaccgactgcgccgtcgccaggttcggccgccgcgccggcatctccatggtcactggcagggccaactaagcttgcttcaacgaccttcatcgctgggagctctgatctattaatttcttaaacagcaatagagctaaacaccggaataagttaatttgtttttaagttcaggggctacacatatacagatcaccaacgtgatatgttatttgatatctgagagcacacaaattttatgcaattttatgttaaagatgaaataacacacaattatactgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0968100, RefSeq:Os01g0968100