BGIOSGA000031

From RiceWiki
Revision as of 09:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000031| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000031, complete gene.| tag = OsI_053...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000031

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000031, complete gene.

LocusTag

OsI_05375

Ensembl Transcript ID

BGIOSGA000031-TA

Ensembl Protein ID

BGIOSGA000031-PA

Length

2059

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46834942..46837000

Sequence Coding Region

46836719..46837000,46836074..46836169,46835897..46835989,46835641..46835754,46835505..46835537
,46835364..46835414,46834942..46835031

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46834942..46837000 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46834942..46837000 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTACATGAAGATAACAACAACCTTGCAACCTCCGAACACGATGATGGTGCTATCAATACGATGATTATGGAGAAAAATGTGGAGGAAGCCAATCTGATCACTCAGGAGCTGAATGACTTGGGTTTGGGAGAAGATATTAGCACTGACAAGTTCCGTGGTTACTTGTGCCAGTTGCCTCAAGAGCGAGACTCTCCCGTTGATATTTCCACTCAATTGAATTTCGATCAGCTCGATGCTCAAAATGAACTCCATGAACTGTATCGTGTGAAGTACTACAAGTGGGGAAAAGTAAGCAACAGAGGACTCTACCAAGCAGTTAAGATAGCCACCGGATTCCCCAAGATTACTGCCAAGTTAGCTTATCTTGGCTTCCATGAATTGGTATCTAGCATGAACTATGATGTTTGTTTTTTTAAGGAGCTAGATGGTGTGTATTTTGAGATTTGGCAGCGGGTCACCAAGCAAAAGATGAGTTTCAGAGATGCAATGAAGGAAGTCTACGAACTGAACAGGTTTCCGGTACGGCAACAAAAAATGAAATATGTACTGGAGATCAATGACTGCTCTCAATGGGAAGCGGAGTTTCATACTTGCACGGCTTGCATTACGGAGGAAGTTGCAGAGGATGAAGTTCTCGGGCTGATTGCAGAGGCAGTTAAGAAGCTGAGGGATAAACCGCGGTTTTATGATGACTACATCAGAAAAAAGATAGAAATTGCCCGAGCTATTGGACTTATCACCACAGTGGAGTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MVHEDNNNLATSEHDDGAINTMIMEKNVEEANLITQELNDLGLGEDISTDKFRGYLCQLPQERDSPVDISTQLNFDQLDAQNELHELYRVKYYKWGKVSNRGLYQAVKIATGFPKITAKLAYLGFHELVSSMNYDVCFFKELDGVYFEIWQRVTKQKMSFRDAMKEVYELNRFPVRQQKMKYVLEINDCSQWEAEFHTCTACITEEVAEDEVLGLIAEAVKKLRDKPRFYDDYIRKKIEIARAIGLITTVES</aaseq>

Gene Sequence

<dnaseqindica>1..282#832..927#1012..1104#1247..1360#1464..1496#1587..1637#1970..2059#ATGGTACATGAAGATAACAACAACCTTGCAACCTCCGAACACGATGATGGTGCTATCAATACGATGATTATGGAGAAAAATGTGGAGGAAGCCAATCTGATCACTCAGGAGCTGAATGACTTGGGTTTGGGAGAAGATATTAGCACTGACAAGTTCCGTGGTTACTTGTGCCAGTTGCCTCAAGAGCGAGACTCTCCCGTTGATATTTCCACTCAATTGAATTTCGATCAGCTCGATGCTCAAAATGAACTCCATGAACTGTATCGTGTGAAGTACTACAAGGTTAGTTTCATCCATGCTCTATCTATATATCAATCAATTAATCATCATATATACGCCATGCATTCTAGTATATTCTGTACATTTTATATATGTTGCATATACTTTTATTCGTATATATAGGTGTCGTTATATATGATTAACCTCCTGTTTGAATTTGCAATATTCAATATAATCTCGTAAGTGATCTTAGGGCCTGTTTGGTACAGCTCCAACTCCTAAATATAACTCCAGGAGTTGAGTCTGGAGTGGAGTTGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTAATCAAGTGTTAAAACTTTGTAACGTTTTTAAAACATTGACTACCGTACTAATAGCCTCCTTTTATTATGAAACAGTGGATGGAAGATTATGTGTTACTTGAGCGGCCATCTCTTAAGGCAAGTATTATTTGTATAAACAAATTTTGTATCTGCATGTATTGTATCACCATGATAACTCTGTATGTAGTGGGGAAAAGTAAGCAACAGAGGACTCTACCAAGCAGTTAAGATAGCCACCGGATTCCCCAAGATTACTGCCAAGTTAGCTTATCTTGGCTTCCATGTATGATACTTAAGTTGCACACTATTTAATTTGATTTTGGTGGTTTTGTATATATCTAACAGTTGAATTACTCATGCAATTCAGGAATTGGTATCTAGCATGAACTATGATGTTTGTTTTTTTAAGGAGCTAGATGGTGTGTATTTTGAGATTTGGCAGCGGGTCACCAAGCAAAAGGTCAGTACAATATCAACACTATACCCCAGCTGCACAACTAAAATTTATGTAATGTAAATATATAATGGTTTATTTCGTATGTTTATAAATGTTGTATTTGCTCAGTGATGCCCGTGTTTTCTCTTTAACTATGTATGTCCAGATGAGTTTCAGAGATGCAATGAAGGAAGTCTACGAACTGAACAGGTTTCCGGTACGGCAACAAAAAATGAAATATGTACTGGAGATCAATGACTGCTCTCAATGGGAAGCGGAGGTAATTTAGTTGTGTTGTTCATTGATGACCTGCAAATTTATAATGTGGTATCTAATTGCCTTGTTTTATGCTTATTCATTTCATCGTTTTTTCCCCTTTCCAGTTTCATACTTGCACGGCTTGCATTACGGAGGAAGTAAGTAGTCTTATGTATCTGACATGCAAGTGCAATCCATTATATATTTATACTGGTAGATGTTGTTATGTCTAACATCCCACTTGTCAGGTTGCAGAGGATGAAGTTCTCGGGCTGATTGCAGAGGCAGTTAAGAAGCTGGTACTGTACTATATGAAGTTCTCTATGCATGCATGCTTACTTTTTTAAAAAAAGTTTAGTACTACCTCCGTCTCAAAATAAGTGCAGCCGTGGATATCCGTGCCCAACGTTTAACCATCCGTCTTATTTAAAAAATTTGTGAAATATTTAAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAAATTTCAAATAAGACGAACAATCAAACGTTAAACGTGAATAGTGTAAAACTACACTTATTTTGGGACGTAGGGAGTAGTTTACTAATTGAGATTTCTTTTATTTGTAGAGGGATAAACCGCGGTTTTATGATGACTACATCAGAAAAAAGATAGAAATTGCCCGAGCTATTGGACTTATCACCACAGTGGAGTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000031