BGIOSGA000035

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000035| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000035, complete gene.| tag = OsI_053...")
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Gene Name

BGIOSGA000035

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000035, complete gene.

LocusTag

OsI_05369

Ensembl Transcript ID

BGIOSGA000035-TA

Ensembl Protein ID

BGIOSGA000035-PA

Length

2785

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46774714..46777498

Sequence Coding Region

46777199..46777498,46777023..46777115,46776825..46776932,46776667..46776693,46775726..46775840
,46775516..46775649,46775322..46775423,46775139..46775231,46774924..46775059
,46774714..46774829

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46774714..46777498 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46774714..46777498 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGTCGTCGCCGCCCGCCGCCTCCGCCGCCGCGAGGCTGGATCTGGACGGCAACCCCATCGCGCCCCTCACCATCTGCATGATCGGCGCCGGCGGCTTCATCGGCTCCCACCTCTGCGAGAAGCTCATGGCCGAGACCGCCCACGTCGTCTACGCCGTCGACGTCTACTGCGACAAGATCCGCCACCTCGTCGACCCCGCCCCTCCCCACCTCCATGGCCGCATCTCCTTCCACCGCCTCAACATCAAGAACGACTCCAGGCTCGAGGGCCTCATCAAGATGGCCGATCTGACGATCAACCTGGCGGCGATCTGCACGCCGGCCGACTACAACACGCGCCCCCTCGACACCATCTACAGCAACTTCATCGACGCGCTCCCTGTGGTCAAGTACTGCTCTGAGAACAACAAGCGTCTCATCCACTTCTCCACGTGCGAGGTCTACGGCAAGACCATCGGCAGCTTCCTCCCCACCGACCACCCTCTCCGCAAGATTGGGGGTGGAATGGATCTGGTGCAGGAACCTGAATTTTATGTACTGAAAGAAGATGAATCCCCCTGCATTTTTGGTCCAATTGTGAAACAGCGATGGTCTTATGCATGTGCGAAGCAGCTTATTGAGAGGCTTATTTTTGCTGAAGGAGCAGAAAATGGCCTTGAGTTCACAATTGTGAGACCTTTCAATTGGATTGGACCAAGAATGGACTTTATTCCTGGTGTTGATGGTCCTAGTGAGGGTGTTCCTCGGGTTTTGGCATGTTTCAGTAACAATCTCCTGCGTCGGGAGCCCCTGAAACTTGTTGATGGTGGCCAGTCCCAGAGAACTTTTGTTTACATTAAGGATGCCATTGAAGCTGTTCACTTGATGATTGAAAATCCTGCTCGTGCCAATGGTCAAATCTTCAATGTCGGGAATCCTAACAATGAAGTCACTGTTAGGCAATTGGCTGAAATGATGACAGAGGTCTATGCAAATGTCTCAGGAGAGCCACCACTGGATGAACCTATGATTGACGTGAGTTCGAAGCAGTTCTATGGTGAAGGATATGATGATAGTGATAAGAGGATTCCTGACATGACCATAATCAACAAGCAGCTTGGTTGGAATCCGAAGACCCCTCTCAAGGATTTGCTGGAGACAACATTGACCTACCAGCACAAGACTTACAAAGAAGCTATCAAAAGGCAAATGTCACAGGCTTCAGCGTCGAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MSSSSSPPAASAAARLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDPAPPHLHGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPTDHPLRKIGGGMDLVQEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMTEVYANVSGEPPLDEPMIDVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAIKRQMSQASASS</aaseq>

Gene Sequence

<dnaseqindica>1..300#384..476#567..674#806..832#1659..1773#1850..1983#2076..2177#2268..2360#2440..2575#2670..2785#ATGTCGTCGTCGTCGTCGCCGCCCGCCGCCTCCGCCGCCGCGAGGCTGGATCTGGACGGCAACCCCATCGCGCCCCTCACCATCTGCATGATCGGCGCCGGCGGCTTCATCGGCTCCCACCTCTGCGAGAAGCTCATGGCCGAGACCGCCCACGTCGTCTACGCCGTCGACGTCTACTGCGACAAGATCCGCCACCTCGTCGACCCCGCCCCTCCCCACCTCCATGGCCGCATCTCCTTCCACCGCCTCAACATCAAGAACGACTCCAGGCTCGAGGGCCTCATCAAGATGGCCGATCTGGTCTCTCCCTCTCTCTCCCTCCTGCTCTCAATTTCAATCTCATTTCATTTCTGATAACACGCCTTGATTCCGGATCTGCGTAGACGATCAACCTGGCGGCGATCTGCACGCCGGCCGACTACAACACGCGCCCCCTCGACACCATCTACAGCAACTTCATCGACGCGCTCCCTGTGGTAATCCCTCCTCTTCTCCACTCCAGATTTCTTCTTCTTCTTTTCTACCACTAGTGCAGAATTGTTGATGGACGTGTGTGATGTGCACAGGTCAAGTACTGCTCTGAGAACAACAAGCGTCTCATCCACTTCTCCACGTGCGAGGTCTACGGCAAGACCATCGGCAGCTTCCTCCCCACCGACCACCCTCTCCGCAAGGTCATCCACCATATCACTCTATTTTGACGTTTCTTCTGGATAATAATGTGCTTGTGCCAATTGTACAAGTCTGTGTGACATTTTCTTTTTTGGTTGGTTGACTGAAAAGCAAACTGATTGGTACTGATTAGATTGGGGGTGGAATGGATCTGGTGCAGGTCTGCTAGATTCAGTTGTTCAGCTGCCATTATCCTGTACTTGCTGTTGTACGGCCTTGACAGTAAGGTTGGGTTAGATTTGGTGTTGGTTGGGAATGGATTTTCTTATTGGACCTTGTCTGGTTGTTGGTTGACACTCGGATATATGGTCTTGTGATGGTGGTTCTGTTTCAGGATTATTGAATGTTTTGACTTTCTTAGGATAGCAGAGTTGACAGCATCTCTTGGAGTGTCAGTATTTCTCATGTTGCTCTATCCTTCATCTGTGTAGATTGTCCAGTGCCATGTTGTGTTATGGAATGACTTGTTCCTCCTCTAGTTTGATGATACTTATTTCTTCAGGCATAACTATGTTTATGTGCTACTACTGCACATTGCTTTGCAAGTGGATATAGTAATCAAGAATACATGGCATCTTAAGGAAATGTCTTTTCTAATTGTATTTCCAATGTGATAAGTTAGTCCTGTAGGTGCATCAGTATTTAAAGTGAAGTCAACTAGCAACACGCTTGGAGGGTCAGGATCTAATGATAACTTGCTTATTGTTCCATGGACTTCCCCAATAAAGTTTACCCTAGAGTCTATATTGTTGAGTTGTATGCTTTGCAATGTATTTGTCTACTTTCACGGAGACAGTAGAGGAGGGCCCTACGCCCCTACTGAAATGCAGTAGTCCAGTTGTTGCATTCTCTTTAGTTAAATTGCTATGCATTTGCATTGACATGGATGGAGAAAGGAGCAAGTGTAAACCTGCCCATTACATGTCTTAATTTTGATCACAATTGACTCTTATCTGATATTTGTGTACCTTCAAACTTTGAAACAGGAACCTGAATTTTATGTACTGAAAGAAGATGAATCCCCCTGCATTTTTGGTCCAATTGTGAAACAGCGATGGTCTTATGCATGTGCGAAGCAGCTTATTGAGAGGCTTATTTTTGGTGAGTGCAGTAACTTTTGTTATTCATGTCATTACCTGAACACTTTGTAACCGTGTGCTTTTTGAGCTTTAACCAGCTGAAGGAGCAGAAAATGGCCTTGAGTTCACAATTGTGAGACCTTTCAATTGGATTGGACCAAGAATGGACTTTATTCCTGGTGTTGATGGTCCTAGTGAGGGTGTTCCTCGGGTTTTGGCATGTTTCAGTAACGTATGTCAACCAGTCCCTTTCTGAGAATAATATACCTCCATTTCGTTATGGTCGTTTTTCTCATAAGATGTATGTCGCCAATGAATTTGCAGAATCTCCTGCGTCGGGAGCCCCTGAAACTTGTTGATGGTGGCCAGTCCCAGAGAACTTTTGTTTACATTAAGGATGCCATTGAAGCTGTTCACTTGATGATTGTATGTTTTCTCTGTTTATCTTTACTTCCTTTGCTCTTATGCTAGATTTACCTTGTTAGTTGAACTGAAATGTGTACTTTATGTCAAAAGGAAAATCCTGCTCGTGCCAATGGTCAAATCTTCAATGTCGGGAATCCTAACAATGAAGTCACTGTTAGGCAATTGGCTGAAATGATGACAGAGGTACATCATTAGCGTGGCAATGTTTCTTTGAGCGTTTCTGTTACTCATGCCCTAAGTCTTACATGGTTGTCCTGTACAGGTCTATGCAAATGTCTCAGGAGAGCCACCACTGGATGAACCTATGATTGACGTGAGTTCGAAGCAGTTCTATGGTGAAGGATATGATGATAGTGATAAGAGGATTCCTGACATGACCATAATCAACAAGCAGCTTGGTATTTACTGTCTTCAATAACCTGTTATGTCTATGTTGTACTAGTTGGGTAACCAGTGGTTCATAATAACCAAATATTGATTCAACTGTTCTAGGTTGGAATCCGAAGACCCCTCTCAAGGATTTGCTGGAGACAACATTGACCTACCAGCACAAGACTTACAAAGAAGCTATCAAAAGGCAAATGTCACAGGCTTCAGCGTCGAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000035