BGIOSGA000109

From RiceWiki
Revision as of 10:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000109| Description = cDNA clone:001-031-F09, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA000109, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000109

Description

cDNA clone:001-031-F09, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA000109, complete gene.

LocusTag

OsJ_04761

Ensembl Transcript ID

BGIOSGA000109-TA

Ensembl Protein ID

BGIOSGA000109-PA

Length

558

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45828792..45829349

Sequence Coding Region

45828792..45829349

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45828792..45829349 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45828792..45829349 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MVKIKMPALFRRRSGSKSPPLPQADPASGGGSPAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMMAGGGSFAKIA</aaseq>

Gene Sequence

<dnaseqindica>1..558#ATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000109