BGIOSGA000202

From RiceWiki
Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000202, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000202, complete gene.

LocusTag

OSJNBA0052O12.11

Ensembl Transcript ID

BGIOSGA000202-TA

Ensembl Protein ID

BGIOSGA000202-PA

Length

4150

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44628920..44633069

Sequence Coding Region

44632911..44633069,44632447..44632512,44631600..44631688,44631311..44631456,44631084..44631208
,44630854..44630947,44630597..44630760,44629910..44630071,44629682..44629808
,44629427..44629593,44629119..44629226,44628920..44629012

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44628920..44633069 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44628920..44633069 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCATCTTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCTCCGCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCTAAAGGTTACGCGCCGATTTGCGTTGGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGACTGTTTCGGGCGACCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACAGCAACAAGACACTGCACCGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCAACTACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGAAGAAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGCAACACTCAGCTGCACATAGAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCATGGGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGGTGGACTGATAATCAGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGATTCGGGTGTTCGAACACAACAATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTTCAGGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGATATATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCTTATCTGTCTGCAAGAAGTACAAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAAGAGGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACACTCTCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTCAGCATCTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCCAGCAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGGGCCAAGAAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGCTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTTGCTGTTGTTCCGGTTGGATTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACTCAAGGGAAGATCTTATCAAAGGATTGGAGGTTATCAGCAACGTTGGTGATCTTGTTGGAATCAAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MVIKVPYVTAATTLFSFGLIFGFGHLRDSFRALLRLLFSSAAAADSPAGCNSKGYAPICVGKEDFYIRRFFRRVQDCFGRPIASKPDAWFDVVERYSTDSNKTLHRTTKTSKCLNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKPSAILLAMGYATNSAIIPALIGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPAHLEKLLREQISGGQPRTHRAWKKILVIVEGIYSMEGELCKLPEILSVCKKYKVYTYMDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTLSKSFGSSGGYIAASKEIIQHLKLTCPSHIYGTSMSPPAVQQVISAMKVILGEDGTDRGAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPAKMPAFSRECLKQNVAVVPVGFPATPLLLGRIRICISASHSREDLIKGLEVISNVGDLVGIKYLPVEQEETTSVEKPKKL</aaseq>

Gene Sequence

<dnaseqindica>1..159#558..623#1382..1470#1614..1759#1862..1986#2123..2216#2310..2473#2999..3160#3262..3388#3477..3643#3844..3951#4058..4150#ATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCATCTTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCTCCGCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCTAAAGTTAATACTCCCTCTATGCCTAATTATAAGGCCTATATCTTTTTACACGGTATTTAATAATATATTTTGATCAGTATTTTATTTTATTCTATAATCCCAACAAATGTAAAATTAAAATCACATGAAAGTATTTCAAAATCTGAATCTAGTGATATAACATGCATAATACTTAGTATAGATATAGTTAGTATGATTATCAGTTAAAAACTACCGAGTTTGATTTTTCTTAAAAATTGACGCCCTATAATTTAGGACGGGTAGTATAATTACCTAAATGCCTGCAGGTTAGCTTAATTGATACTCCCTAGTACTAAGTAATTAGCTTCATTAATTTGTCTCTCGCATTATTGATTATCCTACTTATGTGCTGAGCTGATCTTTTTCGTCTCGCATCACAGGGTTACGCGCCGATTTGCGTTGGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGTGAGCTCACCTTCTTCTCTCTTTCTGTCCAACCATGCAATTTTTTTTCTAATATTAATGCGCAAGAGCCTTACATGTCAATATGTTATATTAGAAAAAAAAAGAAAATTTTATACAATCGTACCATGCTGTAACGGTTAGAAGAGGCATACACAAAGAAAAAAAACCATAAATATTAAAAAATAACCTAATATCAAATAAATAAAAAGGGTAAAACGTTTTAAATCCAGACTAGCTAGCCCACTAACTTATAAAACTAGCCAGAAAACCACTAGAAGTTTCTCATATACACAAAGAGAAAATGACATCAACAGCTAGCAGATAGGCATGACTGCATGAGCCCTGAGCTCCCACCATTCACTCATCCATGCGTATAATTAGTAGAACTAATGTGCTATATGTATTAATCAATTATTACTTACTTAGTTTACTTCCTGTGTTTAAAGTTGCTTTTATTTTTGCTCGGCCCTAAGTTAAACGTATATACTAGCATCTTTGATTATTAGTTTATAGAGAAACCGTATAACTTAAAAACATGTTAATGATATATTATGAAGATATAATTAAAAAAACATAAATGTTATGGTGTTAAATTATATAAATATTTAGGAATTAATAGTTTGATTTACAATAAAGTTAAAACGATAAATAATTTGAAACGAATTATGTACTTACTAACATGCATGGTGAATTATTAATCTCTTTAATTCTCGATCTGTTCTTGTGTTTTTCTGAACGAATTACTGTTCTCGCTGCAGGACTGTTTCGGGCGACCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACAGCAACAAGACACTGCAGTATGAATACATTTCTTCTCCTGAATCCCGATTTCATATCTGATTAGCATGCATGATATCCTGATCCAACAATTAACGCTGCACCTCTGAATAACTCTGAATTTCTGATCGATGCAAATGTATATGTCTACATATATATGCAGCCGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCAACTACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGAAGAAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGTACATTTATATAGCACTTAATTGGTATAGTTTAACTCTGATTAATGATCTAAGTATACTGCTAGCTAGAATTAAGCTTTCGTTTATGTTTATGATCTCAAGGCAACACTCAGCTGCACATAGAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCATGGGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGTAATTAGTTTTGTTGTAAATATTTTTTTTTCTAGATAAAGATTTTGTTGTAAATATATATGGAGTCTGTATTTGTTTATTTCTGTTTTTTGTTTCATGCATCCTGGAGCTGATTAATGTACTGTAATTATTTCAGGGTGGACTGATAATCAGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGATTCGGGTGTTCGAACACAACAGTAAGCTCACAAACAACTGTCAATTGCATTTGCAAGTAATTAGTTATTAGCTGAACAATTCATCTCACCAAATTTCATTAATTTCTTTTGCAGATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTTCAGGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGATATATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCTTATCTGTCTGCAAGAAGTACAAGGTTAATTGGAGAAATTAATTCCACTTACTACTAAATTTCTGAATTCTTCTTATGTTTCTTAGTTTCATTCTGAACCATACTAGTAAGAAAAGAACAGTAGTACCATCTTTCAGAAAAAGAGAAAAGGGGAAACTTTTGAGGCATTATAATGCTCTTTGCGGGTAGAAGAACAATCTAGACCATTTTTTTCTAATCCAATGAATCATATTTATTTATACTACAACGTCAACTACTGGTAGTAGATTTTTTTTGTACCGGTAGTAGAGCTCATAAATCAAAATCTAAGATCATTTCTATCGACGATAAATACTAAAGAGCATCGTGAAGGTACCCAAAACTTTTACGGTGGTCTCAACTGGTAGTATTTTACTGCCATTATAGTACTACCGATAGATATCAACAAAAGAAAAAAAGAATTCTTCTTCTGGGTATGTTATTACTGGATTTTTTTTCTGAAACTTTTAAGAGTTGTTCAAACTGGTAGGGATGTACTATATGGTATTGACTAGTAAAACATATGAATAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAAGAGGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACACTCTCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGTATGAATTAATTAAGCAGATTCACTTACCAGTTCTTGTCTGAGAAGACAAAAGAGTTGATAATAAAACTGATCCTTGGATTATTTTTTCATGTTTACCAGGAGATTATTCAGCATCTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCCAGCAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGTATATATCTGCTTCCAAAATTTGAACAAATTGACTCATAATTTCTCCTGTTTTGAGGAAATTCATGATGCAATGTTGTTGTAAACAGGGGCCAAGAAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGCTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTGAGTTTTTTTCAAGTGCACCACAAATCTATTAAAAACCTGATAAAACAATCTTGTCCGTTTAGTAAATCTCTAATGCAAATTTGTCTCAAAATAGTCCAAAGTTTTGTACTATTTGAGTTACACCCTGTAACTCTTTTTTGTGTTATTAAAAAAAAGTTTTGCAGTTTTAACTAATGTGGCATGTTCCATACTTTTAGGTTGCTGTTGTTCCGGTTGGATTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACTCAAGGGAAGATCTTATCAAAGGATTGGAGGTAAAGCACATAATTAACTGAATCTATGGAACTAACTGAATTCATTTTTGGTTTGTGCCGTTCATTCATATCTGAGTATGCATTACTTTCCATGAATATTTTTCAGGTTATCAGCAACGTTGGTGATCTTGTTGGAATCAAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000202

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000202&oldid=37926"