BGIOSGA000257

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Revision as of 10:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000257| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000257, complete gene.| tag = P0413C0...")
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Gene Name

BGIOSGA000257

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000257, complete gene.

LocusTag

P0413C03.5

Ensembl Transcript ID

BGIOSGA000257-TA

Ensembl Protein ID

BGIOSGA000257-PA

Length

6172

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43659749..43665920

Sequence Coding Region

43665318..43665920,43664607..43664792,43664298..43664513,43664092..43664202,43663453..43663650
,43663220..43663351,43662655..43662711,43662452..43662568,43661931..43662008
,43660995..43661138,43659749..43660759

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43659749..43665920 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43659749..43665920 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGCTGCGGACGATCGGGCGGGAGCTGGCGATGGGGTCGCAGGGAGGGTGGGGGCAGTCGAAGGAGTTCCTCGACCTTGTCAAGTCCATCGGCGAGGCGCGGTCCAAGGCGGAGGAGGACCGGATCATCTCGCGGGAGCTGGATCACCTCAAGCGCCGCCTCGCCGACCCCGACGTGCCCCGCCGGAAGATGAAGGAGCTCCTCCTCCGCCTCGTCTACGCCGAGATGCTCGGCCACGACGCCTCCTTCGGCCACATCCACGCCGTCAAGATGACCCACGACGAGTCCCTCCCGCTCAAGCGCACGGGCTACCTCGCCGTCTCCCTCTTCCTCGACGAGCGCCACGACCTCGTCATCCTCGTCGTCAACACCATACAGAAGGACCTCAGGTCCGACAACTACCTCGTCGTCTGCGCCGCGCTCACCGCCGCCTGCCGCCTCATCGGGGAGGAGGCCATCCCGGCCGTGCTGCCCCAGGTCGTCGAGCTGCTCGCGCATCCCAAGGAGGCCGTGCGGAAGAAGGCCGTCATGGCGCTCCACCGATTCTACCAGCGATCCCCCTCATCCGTCTCTCACCTTGTCTCCAACTTCCGCAAGAGGCTCTGTGATAATGATCCTGGGGTCATGGGTGCAACTTTATGCCCCCTCTATGACCTGATTTTGGAAGATCCAAATTCGTACAAGGATTTGGTTGTTAGTTTTGTTAACATCCTCAAACAAGTTGCAGAGAGGAGGCTTCCAACTTCCTATGATTACCACCAAATGCCTGCACCATTTATTCAGATTAAACTATTGAAAATACTTGCGGTGCTGGGTAGCGGTGATAAGCAGGCAAGTGGAAATATGTACATGGTCTTGGGTGACATATTCAGGAAGGGTGACACTGCAAGCAACATTGGCAATGCAATATTGTATGAGTGCATATGCTGTATTTCATCCATATTCCCGAACGCTAAGATGCTTGATGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGAGTGATAGCCATAATCTTAAGTACATGGGCATTGATGCTCTTGGCCGGTTAATTAAAATAAATCCAGATATCGCAGAAGAGCACCAGCTGGCTGTTATTGATTGCTTAGAGGATCCTGATGACACTTTGAAACGCAAGACCTTCGAGCTTCTTTACAAGATGACAAAATCAACAAATGTTGAAGTGATTGTTGATCGAATGATTGAGTATATGATTAACATCACTGATCACCATTACAAGACAGAAATTGCATCTCGTTGTGTTGAGCTAGCAGAACAATTTGCACCTAGCAATCAGTGGTTCATCCAGACCATGAACAAAGTCTTTGAGCATGCTGGAGATCTTGTCAACATCCGAGTTGCACATAATTTAATGCGACTTATTGCTGAAGGCTTTGGAGAGGAGGATGAAGGTGCTGATAGCCAACTAAGATCGTCAGCTGTAGATTCCTATCTACGGATTGTTGGGGAGCCAAAGCTTCCTTCTTCGTTTCTGCAGATAATATGCTGGGTTTTGGGAGAATATGGAACAGCAGATGGGAAATATTCAGCTTCATATATTATTGGGAAGCTGTATGATGTGGCAGAGGCCCACCCAACTGATGACACTGTCAGGGCTTATGCAATCTCCGCAATTTTGAAGATCTTTGCGTTTGAAATCGCTCTTGGAAGGAAGATCGATATGCTACCCGAGTGCCAATCGTTGATAGATGAATTGTCAGCTTCGCATTCAACAGACTTGCAGCAGCGTGCATATGAGCTACAGGCTTTGCTAGGTTTGGACAAACAGGCTGTTGAGAATGTAATGCCAGCCGATGCAAGCTGCGAAGATATTGAGATCGACAGAAACCTCTCGTTTCTAAATGGTTATGTGCAGCAAGCCTTTGAAAATGGTGCTGCACCCTACATTCCTGAGAGTGAACGCTCAGGAGTGGTAAGTGTTGGCAACTACAAGGCCCAGGATCAACAAGAGACATCTGCCCATGCTCTTAGATTCAAGGCCTATGAGCTACCTCCAGCAGCTTCACAGGCCAGTATTTCCCCAACTACTGACCTGGTTCCAGTTCCAGAACCAAGCTACTATAAGGAAGATCACCAAATGTCAAGATCCCAGCCATCAGGCGATTCTCTTTCTGGTGAATTTGGTCTCAAACTTCGTCTTGATGGAGTTCAGAAGAAATGGGGGAGACCAGCCTATTCCTCCTCATCTACGCCTTCAAGTTCAACATCTAGTCAACAAGCAACCAATGGAGGCGTTAGTTCTGAGGTGGGAGGGTCAACAAGTTCACAGGCTCGGGAATCCACATATGGTTCCAAGAGACAGCAGGCCACTGAAGTTTCAGCGGAAAAGCAACGGTTGGCTGCTTCACTCTTTGGTAAAGCTGATAGGAAGGCCCAGGCTGGGCGAAAGACAGCAAAGGAGAGTTCCTCAACTGAGAAAGTAGCTACTGCTAATGCAACACCGCAGCCAGCCAAAGAGCAAGTAATCCCTTCTGCCCCACCACCTGATCTTCTGGATCTGGGAGAGCCAGTTTCATCAAGTCCTCCATTAGCTGATCCTTTCACACAGTTAGAAGGTCTTCTCGGACCAGCATCAGCCTCTCCTGTGGTTTCTGAAACCCCAGCTTCGAGCACTTCGAAAACACCAGATCTTATATCAATCTTTTCGGATGATGTACAAACTGGAGTGACCAGTGGATCCACAGAACCATCACTCGGGGTAAATGTGGTCGCTGCAAAGAAGGGCCCTAGCCTTCAAGATGCCTTGCAGAAGGACGCAGCGGCCCGGCAAGTTGGTGTGACGCCGACAGGGAACAACCCTATTCTATTCAAGGACTTGTTAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELDHLKRRLADPDVPRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYLAVSLFLDERHDLVILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAVLPQVVELLAHPKEAVRKKAVMALHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLILEDPNSYKDLVVSFVNILKQVAERRLPTSYDYHQMPAPFIQIKLLKILAVLGSGDKQASGNMYMVLGDIFRKGDTASNIGNAILYECICCISSIFPNAKMLDAAAETTSKFLKSDSHNLKYMGIDALGRLIKINPDIAEEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIEYMINITDHHYKTEIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLIAEGFGEEDEGADSQLRSSAVDSYLRIVGEPKLPSSFLQIICWVLGEYGTADGKYSASYIIGKLYDVAEAHPTDDTVRAYAISAILKIFAFEIALGRKIDMLPECQSLIDELSASHSTDLQQRAYELQALLGLDKQAVENVMPADASCEDIEIDRNLSFLNGYVQQAFENGAAPYIPESERSGVVSVGNYKAQDQQETSAHALRFKAYELPPAASQASISPTTDLVPVPEPSYYKEDHQMSRSQPSGDSLSGEFGLKLRLDGVQKKWGRPAYSSSSTPSSSTSSQQATNGGVSSEVGGSTSSQARESTYGSKRQQATEVSAEKQRLAASLFGKADRKAQAGRKTAKESSSTEKVATANATPQPAKEQVIPSAPPPDLLDLGEPVSSSPPLADPFTQLEGLLGPASASPVVSETPASSTSKTPDLISIFSDDVQTGVTSGSTEPSLGVNVVAAKKGPSLQDALQKDAAARQVGVTPTGNNPILFKDLLG</aaseq>

Gene Sequence

<dnaseqindica>1..603#1129..1314#1408..1623#1719..1829#2271..2468#2570..2701#3210..3266#3353..3469#3913..3990#4783..4926#5162..6172#ATGGAGCAGCTGCGGACGATCGGGCGGGAGCTGGCGATGGGGTCGCAGGGAGGGTGGGGGCAGTCGAAGGAGTTCCTCGACCTTGTCAAGTCCATCGGCGAGGCGCGGTCCAAGGCGGAGGAGGACCGGATCATCTCGCGGGAGCTGGATCACCTCAAGCGCCGCCTCGCCGACCCCGACGTGCCCCGCCGGAAGATGAAGGAGCTCCTCCTCCGCCTCGTCTACGCCGAGATGCTCGGCCACGACGCCTCCTTCGGCCACATCCACGCCGTCAAGATGACCCACGACGAGTCCCTCCCGCTCAAGCGCACGGGCTACCTCGCCGTCTCCCTCTTCCTCGACGAGCGCCACGACCTCGTCATCCTCGTCGTCAACACCATACAGAAGGACCTCAGGTCCGACAACTACCTCGTCGTCTGCGCCGCGCTCACCGCCGCCTGCCGCCTCATCGGGGAGGAGGCCATCCCGGCCGTGCTGCCCCAGGTCGTCGAGCTGCTCGCGCATCCCAAGGAGGCCGTGCGGAAGAAGGCCGTCATGGCGCTCCACCGATTCTACCAGCGATCCCCCTCATCCGTCTCTCACCTTGTCTCCAACTTCCGCAAGGTCCAAACTAAATCCCTCCCATTTCGTTTCCCAACTGAAATGAACGTAGAATAAGTCGTCCTCAGTCATATATTGTCTCAATTCTGAAATGCACACTCGGCTACAATCATTCTATCAGTCCTACTATGGTTCACATTTCTGTGTTTAATTTGTATATATGTCTGTAATTGCATATGGTGCAGCTAGCTGTTTTCTCCAATTACATTTTCAGCCACTTATTTAACCTAGAAATGTGACTTTTGCTTTGTTTTGTTCATGCCAATTTAAGATAAGTTAGCTAGTCTTAGGTTCTGTCTACAAGAGTTATGGATTCGATTAACACCAAAGATGCAAATTTGTTTACTATTTGTTTGTGTTTCCATGTTAGAATACCAGTGTTTATTGTCTTAAATTGTGTCTTCGTATCTACCTTGAGCCTCAATTGGGATTTCCAGCAACTGTAGCCTGTGGGGTTTCCCAACTGTTAGTGAAGCACATATTTGTTTCTCAGAGAGATGCTTAGTGTTGATCGCTATTATTTTGCAGAGGCTCTGTGATAATGATCCTGGGGTCATGGGTGCAACTTTATGCCCCCTCTATGACCTGATTTTGGAAGATCCAAATTCGTACAAGGATTTGGTTGTTAGTTTTGTTAACATCCTCAAACAAGTTGCAGAGAGGAGGCTTCCAACTTCCTATGATTACCACCAAATGCCTGCACCATTTATTCAGGTATGTGAACTCTATTGAGCTTCAACTTCCTATGTTTGGAGTCTTCAATTGGCACCATCTTATGTCATTAGATTTTACTGTTCTTATTTGCAGATTAAACTATTGAAAATACTTGCGGTGCTGGGTAGCGGTGATAAGCAGGCAAGTGGAAATATGTACATGGTCTTGGGTGACATATTCAGGAAGGGTGACACTGCAAGCAACATTGGCAATGCAATATTGTATGAGTGCATATGCTGTATTTCATCCATATTCCCGAACGCTAAGATGCTTGATGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGGTGCACACAAAGTTCTTATGTGAGACATAAGTGATTTTCATGATGTTGTGTCCATAGGAAATTAACCTGCTTCATTAACTCTTTTATGTTTGCAGAGTGATAGCCATAATCTTAAGTACATGGGCATTGATGCTCTTGGCCGGTTAATTAAAATAAATCCAGATATCGCAGAAGAGCACCAGCTGGCTGTTATTGATTGCTTAGAGGTGAGGAATATAGCAAAATTCAGCTCTTGCGTGTTCATGGAAAATATTGGGTTTTTAGTATGTTGCTTCCATGCGTATATTCCTGTTGCATGCTGCAAGAGAATGAAGCTAAGACTTTTTTACTGAAATCATGCTATAGTTGCAGAAATTAATTTTACGAAGAATGCTGATTTGTAATTCATTTCACGTTTCCCTGCAGAAAGACCAAAATTATGTTAGCTGAAGAAGCACTTATAATTTTCAGAAGATTATATTGTGTTGTTTGATACAATATCGCTGACCTAGTTGCTGGCTTGTTCTGTTCTTATGGCATCAGTTTTGTGGTTTTAATTTGCTACCTCAGTAGATGCATGTCACTGTGTCATCATCTTTAGTTGGATGTGTTATACTTTTCACACTAGCCCTTCTTGTTTCTCACTCAGTGCGGTTTCTTTTGAACAGGATCCTGATGACACTTTGAAACGCAAGACCTTCGAGCTTCTTTACAAGATGACAAAATCAACAAATGTTGAAGTGATTGTTGATCGAATGATTGAGTATATGATTAACATCACTGATCACCATTACAAGACAGAAATTGCATCTCGTTGTGTTGAGCTAGCAGAACAATTTGCACCTAGCAATCAGTGGTTCATCCAGGTGACAGCATCAGTCTATGCATGTTTGTTGTTGAGCACTTAATGTATTTTCTACTAATATTTTTAACAGAAGATCCTTTGGTTCTACTAATTATTTACCAGACCATGAACAAAGTCTTTGAGCATGCTGGAGATCTTGTCAACATCCGAGTTGCACATAATTTAATGCGACTTATTGCTGAAGGCTTTGGAGAGGAGGATGAAGGTGCTGATAGCCAACTAAGATCGTCAGCTGTATGTACTCTGGACTAATCTTAATTCTTTGCTGACATGTTCCCCTTGCTAAACATAAGTATTGTGAATAAACACCTTATACTTTAATTATTCTCTGTGAAAGTGCATCTAAGCCCCTAATTATTTTGGTGGTTAATGACAATCCAATTAGTGAGGACTAATGCTTGCAATTTAGAATGTATGAAGGAATATTAGTCCGGCATGAGTCTATTCGCCCCCCCCCTCCTCTAGGCCTAAGTGACCCTTTCACTCTGATTGGTTAATTTATAATCGAAGTAAGGGGAAAAGCTTATGTTATCCTCTGGTTACGCATGATGAATCAACCTGTAAACCAGATATAAATTCCCCACCTACCATTCAGATATGGACTAAAGTGAACCAGTGCATGTATCAATTCCTGCTGTTTCAACTTGAAAAGTTCTCATGGTGAACTTGAATTTGATGCATGATTCTTAACTTAGTTCACTTTCCCTGGTATGTTAGTTTACACTTTGTTTTCCCTGAACAGGTAGATTCCTATCTACGGATTGTTGGGGAGCCAAAGCTTCCTTCTTCGTTTCTGCAGGTGATTTTAATTTCCTATTTTCTTCTTATATCATACTCCGTACCATGTTTTCTGTGGTAGATTATGTTGATTCATTCTACTTTCAGATAATATGCTGGGTTTTGGGAGAATATGGAACAGCAGATGGGAAATATTCAGCTTCATATATTATTGGGAAGCTGTATGATGTGGCAGAGGCCCACCCAACTGATGACACTGTCAGGGTATGCTCTTGTAGTTTAGCTTTTGTTCCACTGTTATTACATGTGGCCCATTGCTACTGTGCATGCTCTGTGTTGAAATATTATAATATAGATCCAAGTTGATCATTACTTGACATTTTCTTGCGCAGTTACTATGATCAATTGCCATGAAAATCAGAACTTGTAATTTGAAATGTCTCAGGGTACATTGTTGTTGGTAACCCAGTAATCCATTTTGTGGGTAGTTTGATCCATTAGTCCAATCAATTATAGTAGCCTATAATATATATATCCAATTATATATTATATACTGTTATAATCTGGACCCACCTTGATCAACTGTATAGATCTTTTGTTTTCTCTGATTAATGTTCTACTTCCTTATCCTTGAGAAAATCTTTTTTGTACATCTAATTGATTTATTGACATGTCCTGCTGTTTGTTATTCGGTGTTCCTATTCAAGGCTTATGCAATCTCCGCAATTTTGAAGATCTTTGCGTTTGAAATCGCTCTTGGAAGGAAGATCGATATGCTACCCGAGGTAAATGAAAATCTTCACTGTTTGGATTGTCTCACTTATCATTTTTCATGTCAAATTGTCATTAGCTTTCAAGCCAAACCATTGTTTATTACATATAGCTTCACATGTGCAGTTGTGCACCGAAAGAGGGAATTATTTTTCATGAGACTAAAGTTACATGAAAGCTATACTTGCACTAACTGTAAATTATGCTCCTCCCTAGGATTATATGTTTATCAGTTATCACATGCATTTCATACCCAAGCCGAATTTGGTGCATTTTCCTTTGTTGGAATTTACATCTATAATGCTAGTTATTTAAGTTTATGAGCAAATATGCTAATACAAACTTGGAACAGTCATCTCGTGCTGTTCAGTTTGAGCACCACTAGCTATAAAAAAAAGTTTATGAGCAAATATCCTAATACAAACTTGGAACAGTCATCTCGGAAAACTCAAGACTATGGTTAACTTGCCATCTACCCTATATCATCTCTGTGTTTCATAATTCTGTGACAGCCTTTTTCTGTGAATAATTTCGTTATTTGATATAATGTTGTAAAGAAGCAAACCTTTACTTCTGATTTTTAAAACATCATTCCCCACTGGATGATGTAAAGCAATCATGTTCCATATGACTGGAAAGCACAGAGACATATTTGATATTAATACTGTCCACATGATTGGGAGGTCCAGAATAGAAAACATCAACACTATTGCTTACCATGAAGTTGCAAAACTCTCTTCCTGTAGAATTCGTGTACTCTATTGTTTGTAGGTAAATCTTTATAAATCATCTCCGATCCTTTGCAGTGCCAATCGTTGATAGATGAATTGTCAGCTTCGCATTCAACAGACTTGCAGCAGCGTGCATATGAGCTACAGGCTTTGCTAGGTTTGGACAAACAGGCTGTTGAGAATGTAATGCCAGCCGATGCAAGCTGCGAAGATATTGAGGTACTGCTATCCCTTTCTTGGAACCGAGCCTAATGCATGAAACCTTGATTTTATCTGCTTCCTCATATGCATAAAATCCTGGTGACAGCACAGAAACAATCTGGCACTTACATATATTTTTAATATGTTGCACTATTTCTACATAAGCACACAACTTTAAAGCAAAAGTTATAAATTGAACCAAGCGTAAGAGTAAAAGGGCAACCTTTTCACGGATGCTAAATTTATGTTGCAGATCGACAGAAACCTCTCGTTTCTAAATGGTTATGTGCAGCAAGCCTTTGAAAATGGTGCTGCACCCTACATTCCTGAGAGTGAACGCTCAGGAGTGGTAAGTGTTGGCAACTACAAGGCCCAGGATCAACAAGAGACATCTGCCCATGCTCTTAGATTCAAGGCCTATGAGCTACCTCCAGCAGCTTCACAGGCCAGTATTTCCCCAACTACTGACCTGGTTCCAGTTCCAGAACCAAGCTACTATAAGGAAGATCACCAAATGTCAAGATCCCAGCCATCAGGCGATTCTCTTTCTGGTGAATTTGGTCTCAAACTTCGTCTTGATGGAGTTCAGAAGAAATGGGGGAGACCAGCCTATTCCTCCTCATCTACGCCTTCAAGTTCAACATCTAGTCAACAAGCAACCAATGGAGGCGTTAGTTCTGAGGTGGGAGGGTCAACAAGTTCACAGGCTCGGGAATCCACATATGGTTCCAAGAGACAGCAGGCCACTGAAGTTTCAGCGGAAAAGCAACGGTTGGCTGCTTCACTCTTTGGTAAAGCTGATAGGAAGGCCCAGGCTGGGCGAAAGACAGCAAAGGAGAGTTCCTCAACTGAGAAAGTAGCTACTGCTAATGCAACACCGCAGCCAGCCAAAGAGCAAGTAATCCCTTCTGCCCCACCACCTGATCTTCTGGATCTGGGAGAGCCAGTTTCATCAAGTCCTCCATTAGCTGATCCTTTCACACAGTTAGAAGGTCTTCTCGGACCAGCATCAGCCTCTCCTGTGGTTTCTGAAACCCCAGCTTCGAGCACTTCGAAAACACCAGATCTTATATCAATCTTTTCGGATGATGTACAAACTGGAGTGACCAGTGGATCCACAGAACCATCACTCGGGGTAAATGTGGTCGCTGCAAAGAAGGGCCCTAGCCTTCAAGATGCCTTGCAGAAGGACGCAGCGGCCCGGCAAGTTGGTGTGACGCCGACAGGGAACAACCCTATTCTATTCAAGGACTTGTTAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000257

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000257&oldid=37981"