BGIOSGA000261

From RiceWiki
Revision as of 10:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000261| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000261, complete gene.| tag = P0004D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000261

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000261, complete gene.

LocusTag

P0004D12.26

Ensembl Transcript ID

BGIOSGA000261-TA

Ensembl Protein ID

BGIOSGA000261-PA

Length

1966

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43642518..43644483

Sequence Coding Region

43644399..43644483,43644215..43644264,43643634..43643696,43643059..43643149,43642788..43642892
,43642518..43642600

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43642518..43644483 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43642518..43644483 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGCGTCAGCAGCAGCGGCGGCTCGTCCGCCTCGCCGTCGCCGCCGCCGTCGTTGTCGCGGCGGCCCTCATCCTGACCGCTTCGGCCAAGAAGTCCGGAGATGTCACGGAGCTTCAGATCGGTGTGAAGTACAAGCCAGAGTCATGCACCCTGCAAGCTCACAAAGGAGACAAAATCAAAGTGCATTATCGTGGGTCACTCACTGATGGATCAGTGTTTGATTCTAGCTATGACAGAGGTGACCCCTTTGAATTTACTCTTGGAAACGGCCAAGTGATAAAAGGTTGGGACCAAGGGTTACTAGGTATGTGTGTCGGTGAAAAGAGGAAGCTAAAGATACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGACAACCGGTGGTGCTAGCAATAGTGAGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MGKRQQQRRLVRLAVAAAVVVAAALILTASAKKSGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVNGKTTGGASNSEL</aaseq>

Gene Sequence

<dnaseqindica>1..85#220..269#788..850#1335..1425#1592..1696#1884..1966#ATGGGGAAGCGTCAGCAGCAGCGGCGGCTCGTCCGCCTCGCCGTCGCCGCCGCCGTCGTTGTCGCGGCGGCCCTCATCCTGACCGGTATCCGCACAACCCCGTTCCCCATCCCCATCTCCTCTCATAGCTCAGCCGACTTGTAAAGATCTGTTGTTTTTCTACTCTTCTTGTTCTTGATATGTTTGGCTTATACATCGTTTGCTCGATTTGGCTTTCAGCTTCGGCCAAGAAGTCCGGAGATGTCACGGAGCTTCAGATCGGTGTGAAGGTAACCGGTTTTTTCTGGTTGTTCTTGCGATTCTTGCTTCGGGGTGTAGTGGATCTGATACTGCTGAGTTCGTCGATTCGATGTATATCTGCTAATCCGTTCAAACAAGCTCGATTTGTACCAGGCGTGACGAATTTGATATGGATTGGTGTTGTTGAGCTTGGACGATATGGTAGAATAGATTGTGTTGTGCGGATCTGAAATGTGCGAAATGGATGGTTACTGGTTAGGGTCTTTTCCAATTCCATGAAAGGGCTGTTGAATGAACTTTGTTTCACTTGAATATTTGAACCTGTTCTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTATGAATGTTTTTGGCATATTTGGATTTCAACGCTCAGTTCCTACAGGAAAAAGACAATCATTGCAAAGTTAGGATTGTTCTGTTTTTACGTTTAAAATTAAGCATTTCTGCATTTCACTGCATTGCATAGCATAAGTTTTCTTTGGCTATCCTCCTTTCAGTACAAGCCAGAGTCATGCACCCTGCAAGCTCACAAAGGAGACAAAATCAAAGTGCATTATCGTGTAAGTATTCCATATCTTTGTTAATAATATGAAAAGTAACTTGAAACATTTTGATTCCCACATGAATCCTAGAAACTTCCAACATTTAAAATAAAACCTGATTGAGTGGTTGAAACTCAAAGAACGAGTGATTGCAGCTAACTACACTAACTTGGATGTTAAGGACTAGAACTAAGTTTTGTTTTTCTCTATCGTGTTGTACTGCATATAATGGAAGGCATCGTCCATTGGACTATGGATCTGTACATACTCATGTTTTATTTAACGGATCAGATTAAATAGTTTTGTGGATAGAGTGATAAACTACATTGCTGAATGAACAGTGTAGATTCTGTCTTTTATTGTGTGTTTTACCTGGTTTCCCTGTCATGTTTGTTAAAAGACCTCTTTTACAACTGTTAAAGAAAAAAAAATTGTGGTACTTTCCTGCATAGTTTATTTCCACATTTCCATCATTGAGTTGAAATGGTTGATAATGCTGCAGGGGTCACTCACTGATGGATCAGTGTTTGATTCTAGCTATGACAGAGGTGACCCCTTTGAATTTACTCTTGGAAACGGCCAAGTGATAAAAGGTTATTCCTTTTCCCTGGAATACTGAACTTCTCCATATTTATCCATAGTCCATACTGAGGTAGCTTGAATGACCAAGGATGTTATCAAAAATAGGAAATGGACTGTGCAGTTCATATCAATGGCCTTCGCATATCCAACAACCTACATTGTTGTTTTTATCTATAGGTTGGGACCAAGGGTTACTAGGTATGTGTGTCGGTGAAAAGAGGAAGCTAAAGATACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGGTATGGTCTGAATATTTGTTTGTTTGCTTGATGGTTCCTTGTGAAAGAATTATCCATGTGTAGATTCTCAACTTTGACATGGCTATTTTACCATGTTTCACACCTACATTTTACATTGCCAACAGGGCATGTGATAAGTTTTTTCCCATTTACCTATAATACTGACATACGGTTTCGTAACCAATAGGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGACAACCGGTGGTGCTAGCAATAGTGAGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000261