BGIOSGA000277

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Revision as of 10:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000277| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000277, complete gene.| tag = OsI_048...")
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Gene Name

BGIOSGA000277

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000277, complete gene.

LocusTag

OsI_04878

Ensembl Transcript ID

BGIOSGA000277-TA

Ensembl Protein ID

BGIOSGA000277-PA

Length

4709

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43392804..43397512

Sequence Coding Region

43397099..43397512,43396888..43397012,43396246..43396324,43396134..43396178,43395885..43396007
,43395697..43395800,43395466..43395520,43395276..43395337,43395072..43395174
,43394772..43394925,43394513..43394586,43394204..43394260,43393982..43394056
,43393799..43393873,43393440..43393721,43393276..43393340,43393141..43393201
,43392804..43393022

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43392804..43397512 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43392804..43397512 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGACTCCGGCGGCGCTGCTCCTCACCGCGGCCACCGGCTCGGCGGCGCTGTCGGTGGGCGTGGCGGCGGTGGGGCCCAGGGCGCCGTCGCTGCATCTGCGGTCGGCGTCGGCCACGAGGAGGGCCCCGGGGCGGGCGAGGCCGACGAGGATCCGCGCCGCGGCGGCGATCGGGGGAGAGTTCGGCGGGCTGGCCCAGCGGCGCGCCCTCGCCGGGGAGTTCATCGAGCGGCTGCGGAACGTGCTGCCCGGGGGAAGCTGGTGGCGCCTCGAGGACGGCGAGGAGGCCGGGGGCGGCCGCGCCGAGGCCAGCGGCGCCACGGCCGCCTCCGCGCTCAGGCGGATGTGGGCGCTCGTCGCCTCCGACCGATGGGTTGTCTTCGTCGGATTCGCGTCCCTCGTCGGCGCTGCGCTCGCGGAGATCGCGATACCCCATCTCCTCGCAGCGTCCATCTTCTCGGCGCAGAACGGAGGGGCTGTGTTCTACCGGAACGCTAAGCTTCTGGTTGTTCTGTGTTTGATTTCCGGAGTGTTTAGTGGTGTGCGAAGCTGCTGTTTTGGTGTTGCAAACATGATATTCCCACACCATGTTAGATTTCTTAATGTAACTTTCCAAGTCAAACGAATGAGAGAAATGCTGTTTGATTCTATTCTTTCTCAGGACATTGCTTTTTTTGATGAAGAAACTGTTGGTGATTTGACAAGTAGGCTTGGTTCTGACTGCCAGCAAGTGTCACGAGTCATTGGCAATGATCTTAATCTTATCTCACGCAATTTGCTTCAGGGTGTAGGCGCACTAATTTATCTGCTAGTCTTATCTTGGCCACTTGGAATGTGCACTATGTTGATTTGTGCGACATTGTCGACCATTATGCTAGTTCATGGACGGTATCAGAAAAGAGCAGCCAAATTTGCACAGGAGTTCACTGCAAGTGCCAACAATGTTGCTCAAGAGGTGATAAGTTTGGTTCGGACAGTACGGGTTTATGGAACAGAAAAGCAGGAATATGCAAAGTGGCTAGATAAGCTATATGATGTAAGCTTTCGGCAAACAATGGCTTATGGAGGCTGGAGCTTGAGTTTGAACTATCTATACCATTCTACTCAGGTCATTGCAGTGTTGATTGGAGGGATATCCATCATGGCTGGGAAGCTAACTGCTGAGCAACTGACAAAATTCATACTCTATGCTGAGTGGCTAATTTTGTCAACATGGTGGATTGGAGACAACTGGTCCTCTCTGATGCAGTCTGTTGGAGCAAGCCACAGGTTACAGAAGTTGGAAGGCCGGATTCAGTATGCCGATGTATCATTTTCATATCCATCAAGACCTACGGTACCAATTCTGGGTGGATTGAATCTAACACTTCATCCAAATGAAGTAGTTGCAATTGTTGGTCTTAGTGGAAGTGGAAAGAGTACTGTAGTTAACCTACTACTTCGGCTATATGAACCTACAGATGGGCAAATATTAGTAGATGGTGTCCCACTCAGTGAGCTTGACATCAGATGGTTCAGGGAAAGGATTGGTTTTGTTGGACAGGAACCTAGGCTATTCCGAATGGATATTAGTTCTAATATTAGGTATGGTTGTCCAAGAGAAGTTAGCAATGAAGAAGTGGAGTGGGCTGCAAAGCAGGCATATGCTCACGATTTCATAATGTCTCTCCCTGATGGTTATAACACCATTGTCGATGATGCTCTTCTTAGTGGAGGCCAAAAGCAACGCGTTGCTATTGCGAGGGCCCTTCTTAGGGACCCATCCATCTTGGTATTAGATGAAGCCACTAGTGCACTTGATGCTGAGAGTGAACATTATGTGAAGAATGTAATCACAAAGTTTAGTACTGATCCTAAGGCTAGAAGAACCGTGATCATCATAGCTCACAGACTATCTCCAATTCAAGCGGCTGATAGAATTATCGTGATGGAAAATGGTAATATTGTGGAGGATGGAAAACACAGCGAGCTTATTAATAAGCACGATGGTTTGTATTCCAGATCAGCTAGCGACAAAACACGCCCTCGATTAGTCCTGAATTCACAGAGATCGGTCTACTCCACACCATTTTTTTTCAAGTGGAACGGCAGGCAAGGAGAGTTTTTAGTAATTGGTGTATTCTTTACGAGTGACCCTGACCGTGGTGGCCAAACAGGTGAAACTGGATAG</cdnaseq>

Protein Sequence

<aaseq>MPTPAALLLTAATGSAALSVGVAAVGPRAPSLHLRSASATRRAPGRARPTRIRAAAAIGGEFGGLAQRRALAGEFIERLRNVLPGGSWWRLEDGEEAGGGRAEASGATAASALRRMWALVASDRWVVFVGFASLVGAALAEIAIPHLLAASIFSAQNGGAVFYRNAKLLVVLCLISGVFSGVRSCCFGVANMIFPHHVRFLNVTFQVKRMREMLFDSILSQDIAFFDEETVGDLTSRLGSDCQQVSRVIGNDLNLISRNLLQGVGALIYLLVLSWPLGMCTMLICATLSTIMLVHGRYQKRAAKFAQEFTASANNVAQEVISLVRTVRVYGTEKQEYAKWLDKLYDVSFRQTMAYGGWSLSLNYLYHSTQVIAVLIGGISIMAGKLTAEQLTKFILYAEWLILSTWWIGDNWSSLMQSVGASHRLQKLEGRIQYADVSFSYPSRPTVPILGGLNLTLHPNEVVAIVGLSGSGKSTVVNLLLRLYEPTDGQILVDGVPLSELDIRWFRERIGFVGQEPRLFRMDISSNIRYGCPREVSNEEVEWAAKQAYAHDFIMSLPDGYNTIVDDALLSGGQKQRVAIARALLRDPSILVLDEATSALDAESEHYVKNVITKFSTDPKARRTVIIIAHRLSPIQAADRIIVMENGNIVEDGKHSELINKHDGLYSRSASDKTRPRLVLNSQRSVYSTPFFFKWNGRQGEFLVIGVFFTSDPDRGGQTGETG</aaseq>

Gene Sequence

<dnaseqindica>1..414#501..625#1189..1267#1335..1379#1506..1628#1713..1816#1993..2047#2176..2237#2339..2441#2588..2741#2927..3000#3253..3309#3457..3531#3640..3714#3792..4073#4173..4237#4312..4372#4491..4709#ATGCCGACTCCGGCGGCGCTGCTCCTCACCGCGGCCACCGGCTCGGCGGCGCTGTCGGTGGGCGTGGCGGCGGTGGGGCCCAGGGCGCCGTCGCTGCATCTGCGGTCGGCGTCGGCCACGAGGAGGGCCCCGGGGCGGGCGAGGCCGACGAGGATCCGCGCCGCGGCGGCGATCGGGGGAGAGTTCGGCGGGCTGGCCCAGCGGCGCGCCCTCGCCGGGGAGTTCATCGAGCGGCTGCGGAACGTGCTGCCCGGGGGAAGCTGGTGGCGCCTCGAGGACGGCGAGGAGGCCGGGGGCGGCCGCGCCGAGGCCAGCGGCGCCACGGCCGCCTCCGCGCTCAGGCGGATGTGGGCGCTCGTCGCCTCCGACCGATGGGTTGTCTTCGTCGGATTCGCGTCCCTCGTCGGCGCTGCGGTAATGGCGATTTCTGGGTTTGACCTCTGCTGCTGCAGAGTTCTCGTTGATGGGTCTAACGCGGTGACGTGTGGTTGTGGTTGCAGCTCGCGGAGATCGCGATACCCCATCTCCTCGCAGCGTCCATCTTCTCGGCGCAGAACGGAGGGGCTGTGTTCTACCGGAACGCTAAGCTTCTGGTTGTTCTGTGTTTGATTTCCGGAGTGTTTAGGTCAGTTATTGCTTCTTTGCTTTGTTAAAACTGTGTTTAAGTCGTGAACGCGATCATTAGAGAAGCCAACAAGTAGGTGATGCTGCATTCATCGGAAAAACCAAAGAAGTTGGTAATCCTGCATTTTCAAGCATGCATTCTGTATTTCTGTCTACAATACAACTGTACCTGATCACATTGTTGTTGTGGTGAAAACTGAAAAGGTCGTTAGACGTTTAGGTCCATAAGATCACTTCCATGGATGGTGTGGTTGACAATGTAATATCATATAATGTGTTGGTAGTCCAAATCTAGGGCAGGAATGGAAATGCTTTGAGCTTCAATGGGTCTGAATATTGAAAATCTTCTATTATGCTGATGAATCGATTTGGTAGCTCATGGCACTATAGGGTAGCAGAAATACAAATTTCTACATTTACCAGTGTCCTGTCAAATGCACTATAGGCATTTAGCAAGATACTCCGTAATCTGCATTGAAACCAAAATTGTTTGTCTTCTGCATGTTTTTTTTTTTTGTGAAAAATCAATTGTGGTTGCTTACTAGCTGGTATCCAATTTTGCAGTGGTGTGCGAAGCTGCTGTTTTGGTGTTGCAAACATGATATTCCCACACCATGTTAGATTTCTTAATGTAACTTTCCAAGTTATTCCTCACGATTGCCCCTTTGTTGACCAGTCTCTAACCTTCATCATCTGAAAATTTTCCGTAGGTCAAACGAATGAGAGAAATGCTGTTTGATTCTATTCTTTCTCAGGTAAAACAAAAGGAATAAAAAATATTACTGCTGAAAGAAATTTCATTAATGTACATAAAGTTTTCTGTTGTTTTACTTTGGTTGACCCAAGTATGAAGCTTTTAACTGTATTTTAAATTATGCTAGGACATTGCTTTTTTTGATGAAGAAACTGTTGGTGATTTGACAAGTAGGCTTGGTTCTGACTGCCAGCAAGTGTCACGAGTCATTGGCAATGATCTTAATCTTATCTCACGCAATTTGCTTCAGGTGAAAAGGTTGTTTAGTAGTCTTGTATGAAAATGTAACCAGTAGCTTCAAAAACTCACGTACCATTTTGTCACTTTATTTCAGGGTGTAGGCGCACTAATTTATCTGCTAGTCTTATCTTGGCCACTTGGAATGTGCACTATGTTGATTTGTGCGACATTGTCGACCATTATGCTAGTTCATGGACGGTAAAAACCTACTCTTATTTACCTTGTATATTGTCTCTCCCTTTTCTGTGTTAGCTGTCTTTCATATTACATTACCTGAGTAGTGAAAGTTCAAGGAAGCACCACCACGTTTTTATTTTATTGCTTAACACCTGTGATCCATGCGAGAGAAATCATTATGATACTGTGATTAATAGGTATCAGAAAAGAGCAGCCAAATTTGCACAGGAGTTCACTGCAAGTGCCAACAATGTAAGTTTGTACTCTTTACAATAAGCTACTTCCTCTGTCCCATGGGAAAAATCCCTTATATTTTTGGATGAAGGTAGCATTTCATAAGGCAAAGTTTTCATCTCAGTTTTCACATTAAACTAAATCAGGTTGCTCAAGAGGTGATAAGTTTGGTTCGGACAGTACGGGTTTATGGAACAGAAAAGCAGGAGTTTAAAAGGCAATCTCTACCTCCCTCTCTCTCTCTCTATCTCAAACACGCTCATACATACACACAAAAACAAAATCTCACGATGCCTTGTACTCTGATAGATATGCAAAGTGGCTAGATAAGCTATATGATGTAAGCTTTCGGCAAACAATGGCTTATGGAGGCTGGAGCTTGAGTTTGAACTATCTATACCATTCTACTCAGGTAGTTTGATGTTTCTGTTCAATTCATAATGATACTCCAATCAGAACATATTTAAATTAGCAATTTTGTAAAATATAAAATGCCTGGTTCTGATATGAATTTGTTGTACCGTTGATGATGTATTCTTGCAAATAAGCTTTGTGTAGGTCATTGCAGTGTTGATTGGAGGGATATCCATCATGGCTGGGAAGCTAACTGCTGAGCAACTGACAAAATTCATACTCTATGCTGAGTGGCTAATTTTGTCAACATGGTGGATTGGAGACAACTGGTCCTCTCTGATGCAGTCTGTTGGAGCAAGTGAAAAGGTCTTCCGTTTGATGGATCTACTTCCTAGCAGACAGCTTAGTTCTGAAGGCAAGAAAATAAATTGCATGTTACAAGATACTGTTGTAACCTGATGTCTGATTTAGAATGGCTAGTTGAATTTTTTTTACTTGTGGTTGTAAAATTGTTTAGTGATTTAAAGTACGTCACCATTGCAGGCCACAGGTTACAGAAGTTGGAAGGCCGGATTCAGTATGCCGATGTATCATTTTCATATCCATCAAGACCTACGGTATGATTACAGTGCTTTTATGGATACTTCTCTGTTGAGGAGTGCCTGTTGTCACCCACCAAAAAGGGAAAAAAAGAATACCTGTTTATGATCCAGCTGATCTAACCATAATATTCATTTGACTTTTGACTGAAAACCAGTAGAGTGAACCCTAAAGCAGAACAATTTCATAATTATCATATTCGTTATGTAAATAAGAGGAATCTGCTGTTACCTTGTGTCCTTATATTATTGATCTCCTTTTTTTAACAGGTACCAATTCTGGGTGGATTGAATCTAACACTTCATCCAAATGAAGTAGTTGCAATTGTAAGAGATAGAGAACACACTTGCTTTCTAGTTCTCTCCCTATGTGTGTCTGTTGTGTAGAAGAACACAGTTGATTTAATTATTTCATACTTCTGAATTCTCATTTCTGACTAACAAACTGGCTGCATTTATATGAAACTTTTAAAGGTTGGTCTTAGTGGAAGTGGAAAGAGTACTGTAGTTAACCTACTACTTCGGCTATATGAACCTACAGATGGGCAAGTAAGATAATTTCTGCGTCAAACTATTGTCTGTGCCACATGACCGCATGCAGTCGCTTCAAAGCAAACCAGTTGGCTGGTCTGAAGTTATGTTTTGTGATCAATGCAGATATTAGTAGATGGTGTCCCACTCAGTGAGCTTGACATCAGATGGTTCAGGGAAAGGATTGGTTTTGTTGGACAGGTTCAGATCTAACTCAAGGCTCTGCTACCACTAGAACTTTTGTTGTATTAAATAGCCACATATATTGGTGTGTGCAGGAACCTAGGCTATTCCGAATGGATATTAGTTCTAATATTAGGTATGGTTGTCCAAGAGAAGTTAGCAATGAAGAAGTGGAGTGGGCTGCAAAGCAGGCATATGCTCACGATTTCATAATGTCTCTCCCTGATGGTTATAACACCATTGTCGATGATGCTCTTCTTAGTGGAGGCCAAAAGCAACGCGTTGCTATTGCGAGGGCCCTTCTTAGGGACCCATCCATCTTGGTATTAGATGAAGCCACTAGTGCACTTGATGCTGAGAGTGAACATTATGTGAAGGTAACCTCTTCATCAAGATATTTGACCAATTATGTACCTAGATATAAATACAATGTGCCTATGGGCGGCTTGCTGATTCGCTTCCTCCTGCTTTGCTAGAATGTAATCACAAAGTTTAGTACTGATCCTAAGGCTAGAAGAACCGTGATCATCATAGCTCACAGGTAATGTATGCTCATACTGCAGTTGTTTATTTTGAATTTTAAGATTTTAGTTGACACAATCATTTCTCTTGTAGACTATCTCCAATTCAAGCGGCTGATAGAATTATCGTGATGGAAAATGGTAATATTGTGGAGGTATGTTTTCGGCCGCTGTTGCTTCACTGAAAACGCAAACCAGAACTAATCTGATCCTACTATACACATGATATGATGTCATTCAGATTTCTCTACAGTTCTTTTGTGTGGTATGCAGGATGGAAAACACAGCGAGCTTATTAATAAGCACGATGGTTTGTATTCCAGATCAGCTAGCGACAAAACACGCCCTCGATTAGTCCTGAATTCACAGAGATCGGTCTACTCCACACCATTTTTTTTCAAGTGGAACGGCAGGCAAGGAGAGTTTTTAGTAATTGGTGTATTCTTTACGAGTGACCCTGACCGTGGTGGCCAAACAGGTGAAACTGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000277

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000277&oldid=38001"