BGIOSGA000310

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Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000310| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000310, complete gene.| tag = MRP2| ...")
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Gene Name

BGIOSGA000310

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000310, complete gene.

LocusTag

MRP2

Ensembl Transcript ID

BGIOSGA000310-TA

Ensembl Protein ID

BGIOSGA000310-PA

Length

5104

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42948687..42953790

Sequence Coding Region

42953724..42953790,42952191..42953638,42951826..42951912,42950859..42951446,42950609..42950773
,42950241..42950535,42949461..42949981,42949239..42949302,42948900..42949139
,42948687..42948784

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42948687..42953790 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42948687..42953790 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTATGCGGAGAGCCATTATTTGTGCTGTCTGGACACCTTTGATCGCCAATGGAGTCTTTGCAGGGCTTAACACTATTGCTTCCTATATGGGGCCATTCTTGATCACCTACTTAGTGGAGCTACTCTCTGACAAGAATGCTGACAAGGGCCATGGCCATGGCTACATGCTAGCATGCCTTTTCTTTGCCTCAAAGACAGTGGAGTCACTTTCACAGCGGCAATGGTATTTTGGTGCCCGCAGGATTGGTTTCCGGGTGCGTGCAGCACTGATGGTATCCATCTATCAGAAATCCCTGCTGATGAAGAACTCAAGCACAGCCAGCGGGAAAATTGTGAACTTCCTCGATGTCGATGTTGAGAAGGTTAGCGAATTCTTCTGGTACGTACATGGAATTTGGCTGCTACCCTTGCAAATATCCTTGGCACTTGCCATTCTCTACCGTAGCCTTGGTGCAATGGCCTCGCTGTCTGCAGTCCTTGCAACAGTTTTGGTTATGGTGAGCAACACACCACTTGCAAAGTCACAGGAGAACCTCAACATGAAGATCATGGAAGCGAAGGACTCACGGATAAAGGCTATGGCTGAAGCAATGAAGAGTATGAGGATATTGAAGCTGCATGCATGGGAGACAGCTTACTTTGACAAGCTACTGAAGCTAAGGGATGTGGAGAGGGGATGGCTCAGGAAATATCTCTACACATGTTCAGCAATTGCCTTCCTGTTTTGGGCCTCACCGACCTTGGTGTCGGTTGTCACATTTGGTGTATGTATTCTTGTGGAGATGCCATTATCAGCTGGAACAGTCTTATCCGCCGTTGCCACGTTCAGAATCCTCCAAGATCCAATCTACAACCTCCCAGAGCTCGTTTCAATGGTCACACAAACCAAGGTGTCCCTAGATAGAATCGAAGAGTTCATCAAAGAAGAACACCAGGGGAAGCCAAGTCGTTCTGACAATAACACTAGGACTAAGGACCTGTCTATGACTGGTGCAATGGAAATTGAACCAGGGGTATATGGTTGGGAAATTGACAATAGCTTGAAGAAGACAAAATTCATGCTTAAGATTGACAGAAAGCTGAGCATCAGCAAGGGTCAAAAGGTTGCAGTGTGCGGGCCAGTTGGTTCTGGTAAATCAAGCCTCCTTTACAGCATCATGGGGGAGATCCCAAGGATTAATGGTGCAGAAACAACAGTTTTTGGGTCAAGGGCATATGTTGCGCAGAGTGCATGGATTCAGACTGGGACAATTCAAGACAATGTGCTCTTTGGGAAGGATATGGACAGAAGCTTCTATGAGGAGGTGCTGCATGGTTGTGCTTTGGATAGAGATTTGGAGTTATGGGCCAATGGTGATATGACTATGGTAGGGGAGAGGGGCATGAACCTGAGTGGAGGCCAGAAGCAGAGGATTCAGCTTGCCAGAGCATTGTATAGTGATTCTGACGTTTACCTCTTAGATGATCCCTTCAGTGCCGTGGATGCACACACCGGAGCACATCTCTTCAAGGAATGTTTACTGAGGCTAATGTCCTCTAAGACAGTCATATATGTTACTCATCAGCTAGAGTTCTTGAGAGATGCAGATCTTGTTCTGGTCATGAAAGATGGAAGGATTGTTCAATCCGGAAAATATGATGATTTGGTAGCAGACAGGAATGGAGAACTCTCAATGCAAATGGCTGCACATAACCAATCCCTTAGTCAGGTCACACCTGCAAAAGCACATGTCTTGACTAAAAATAAGAGTCACAAGAGAAGGCAGACTGAGCTCACAGAAATAGAATTAGATCACAATGTAATAGGCAGGGAATGCGAGGAGGAGCGCGAATCTGGAAGAGTTAAATGGGATATTTATCGCAAGTTTGTCAACTCTGCATATGGCGGAGCTCTCGTTCCTGTTATTCTTGCATGCCAAGTCCTTTTCCAGGGATTGCAGATATGTAGCAACTATTGGATTGCATGGGCAGCTGAGAGGCAGGAACAAGTAAGCAGGGAGAAGATGATAGGTATCTTTGTGCTGTTATCAGCTGGAAGTTCTGTGTTTATATTGGGAAGAGCTATTGTCCTTTCAACGATTGCCATTGAAACTGCTCATCAGTTCTTCTTAGGCATGACCAGGAGTATTTTTCGAGCACCAATCAACTTCTTTGACTCCACTCCATCAAGTAGAATCCTCAATAGGGCTTCAACAGATCAAAGCACAGTTGACACAGACATTCCCTACAGGCTTGCAGGGCTTATCTTCGCATTAATTCAGCTCCTCAGTATTATTTTCATCATGTCTCAAATTGCCTGGCCTATATTCATTCTATTCATAATTATAATTGCCATCTCTACTTGGTATCAGAGCTATTACATCTGTTCAGCTAGAGAACTAGCAAGGATGGTTGGCATAAGAAAAGCTCCAATCCTCCACCATTTTTCAGAGACTGTATCAGGAGCAGCAACTATTAGATGCTTTAATCAGGGAGAGAAGTTCTTCAGGAAGAGTCTTGCGCTAATTGATGACTACTCCCGCATCACTTTCCACAATTCAGCAACAATTGAATGGTTATGTGTTCGCATCAACTTCCTCTTCAACCTTGTCTTCTTTGTGATGCTAGTCATCCTTGTCTCAATGCCTCGAAATACTATTGATCCAAGCCTCGCAGGGCTGGCAGCTACCTATGGCCTTAACCTTAATGTGTTACAAGCATGGGTCATATGGAATCTGTGCAACGTTGAGAACAAAATGATTTCAGTAGAAAGAATTTTGCAGTTCTCAAACATAACAAGTGAGGCCCCTTTAGTCATTGAGGACTGTAGACCAAGAGAATCATGGCCCTGGTGTGGAACCATTCAGATCGATTCTCTCCAAGTGAGGTACAACCCGGACATGCCAATGGTGCTCAAAGGCATAAGCTGCACAATTCCCGGAGAAAGGAAAATTGGGGTGGTAGGACGGACAGGGAGTGGGAAATCGACTCTAATTCACGCGTTGTTTCGGATTGTTGAACCATCTGAAGGACGGATACTCATAGATGATGTTGATATATCGCTTTTGGGAGTGCATGATCTGCGGTCAAGATTAAGTATTATACCACAAGAACCGACTCTTTTCCAAGGGACAGTCAGAACAAACCTGGATCCTCTACAGCAGCATCTGGACACTGAAATATGGGAGGTTTTGCATAAGTGCCGCCTTGAGGAGATTGTGAGAGAAGACAGTAGATTGTTGGATGCACCAGTTGTTGAAGATGGGGGAAACTGGAGCGTAGGACAAAGGCAACTTGTATGCTTGGCCAGGGTATTGCTAATGAAGAAGAAAATACTTGTTCTGGATGAAGCCACAGCATCGGTTGATACCGCAACAGATAATATCATCCAAAAGACTATAAGGCAAGAGACAAACAATTGCACAGTTATTACAATTGCACATAGGATTCCTACTGTGATTGACAGTGACCTTGTTCTTGTCCTAGGTGAAGGTAAGATACTAGAGTTTGATTCTCCAGAAAATCTCCTCACAGATGAATCATCAGCTTTCTCAAAGCTGGTGATGGAATTCGTGGGAAGATCATCATAG</cdnaseq>

Protein Sequence

<aaseq>MPMRRAIICAVWTPLIANGVFAGLNTIASYMGPFLITYLVELLSDKNADKGHGHGYMLACLFFASKTVESLSQRQWYFGARRIGFRVRAALMVSIYQKSLLMKNSSTASGKIVNFLDVDVEKVSEFFWYVHGIWLLPLQISLALAILYRSLGAMASLSAVLATVLVMVSNTPLAKSQENLNMKIMEAKDSRIKAMAEAMKSMRILKLHAWETAYFDKLLKLRDVERGWLRKYLYTCSAIAFLFWASPTLVSVVTFGVCILVEMPLSAGTVLSAVATFRILQDPIYNLPELVSMVTQTKVSLDRIEEFIKEEHQGKPSRSDNNTRTKDLSMTGAMEIEPGVYGWEIDNSLKKTKFMLKIDRKLSISKGQKVAVCGPVGSGKSSLLYSIMGEIPRINGAETTVFGSRAYVAQSAWIQTGTIQDNVLFGKDMDRSFYEEVLHGCALDRDLELWANGDMTMVGERGMNLSGGQKQRIQLARALYSDSDVYLLDDPFSAVDAHTGAHLFKECLLRLMSSKTVIYVTHQLEFLRDADLVLVMKDGRIVQSGKYDDLVADRNGELSMQMAAHNQSLSQVTPAKAHVLTKNKSHKRRQTELTEIELDHNVIGRECEEERESGRVKWDIYRKFVNSAYGGALVPVILACQVLFQGLQICSNYWIAWAAERQEQVSREKMIGIFVLLSAGSSVFILGRAIVLSTIAIETAHQFFLGMTRSIFRAPINFFDSTPSSRILNRASTDQSTVDTDIPYRLAGLIFALIQLLSIIFIMSQIAWPIFILFIIIIAISTWYQSYYICSARELARMVGIRKAPILHHFSETVSGAATIRCFNQGEKFFRKSLALIDDYSRITFHNSATIEWLCVRINFLFNLVFFVMLVILVSMPRNTIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNITSEAPLVIEDCRPRESWPWCGTIQIDSLQVRYNPDMPMVLKGISCTIPGERKIGVVGRTGSGKSTLIHALFRIVEPSEGRILIDDVDISLLGVHDLRSRLSIIPQEPTLFQGTVRTNLDPLQQHLDTEIWEVLHKCRLEEIVREDSRLLDAPVVEDGGNWSVGQRQLVCLARVLLMKKKILVLDEATASVDTATDNIIQKTIRQETNNCTVITIAHRIPTVIDSDLVLVLGEGKILEFDSPENLLTDESSAFSKLVMEFVGRSS</aaseq>

Gene Sequence

<dnaseqindica>1..67#153..1600#1879..1965#2345..2932#3018..3182#3256..3550#3810..4330#4489..4552#4652..4891#5007..5104#ATGCCTATGCGGAGAGCCATTATTTGTGCTGTCTGGACACCTTTGATCGCCAATGGAGTCTTTGCAGGTTAGTGAGCCATTGGAAGAACAAAAGTGGAGCTACCCTTTGACCTTTATATTATACTAACATGATGCTTTGCATTTATTACCAGGGCTTAACACTATTGCTTCCTATATGGGGCCATTCTTGATCACCTACTTAGTGGAGCTACTCTCTGACAAGAATGCTGACAAGGGCCATGGCCATGGCTACATGCTAGCATGCCTTTTCTTTGCCTCAAAGACAGTGGAGTCACTTTCACAGCGGCAATGGTATTTTGGTGCCCGCAGGATTGGTTTCCGGGTGCGTGCAGCACTGATGGTATCCATCTATCAGAAATCCCTGCTGATGAAGAACTCAAGCACAGCCAGCGGGAAAATTGTGAACTTCCTCGATGTCGATGTTGAGAAGGTTAGCGAATTCTTCTGGTACGTACATGGAATTTGGCTGCTACCCTTGCAAATATCCTTGGCACTTGCCATTCTCTACCGTAGCCTTGGTGCAATGGCCTCGCTGTCTGCAGTCCTTGCAACAGTTTTGGTTATGGTGAGCAACACACCACTTGCAAAGTCACAGGAGAACCTCAACATGAAGATCATGGAAGCGAAGGACTCACGGATAAAGGCTATGGCTGAAGCAATGAAGAGTATGAGGATATTGAAGCTGCATGCATGGGAGACAGCTTACTTTGACAAGCTACTGAAGCTAAGGGATGTGGAGAGGGGATGGCTCAGGAAATATCTCTACACATGTTCAGCAATTGCCTTCCTGTTTTGGGCCTCACCGACCTTGGTGTCGGTTGTCACATTTGGTGTATGTATTCTTGTGGAGATGCCATTATCAGCTGGAACAGTCTTATCCGCCGTTGCCACGTTCAGAATCCTCCAAGATCCAATCTACAACCTCCCAGAGCTCGTTTCAATGGTCACACAAACCAAGGTGTCCCTAGATAGAATCGAAGAGTTCATCAAAGAAGAACACCAGGGGAAGCCAAGTCGTTCTGACAATAACACTAGGACTAAGGACCTGTCTATGACTGGTGCAATGGAAATTGAACCAGGGGTATATGGTTGGGAAATTGACAATAGCTTGAAGAAGACAAAATTCATGCTTAAGATTGACAGAAAGCTGAGCATCAGCAAGGGTCAAAAGGTTGCAGTGTGCGGGCCAGTTGGTTCTGGTAAATCAAGCCTCCTTTACAGCATCATGGGGGAGATCCCAAGGATTAATGGTGCAGAAACAACAGTTTTTGGGTCAAGGGCATATGTTGCGCAGAGTGCATGGATTCAGACTGGGACAATTCAAGACAATGTGCTCTTTGGGAAGGATATGGACAGAAGCTTCTATGAGGAGGTGCTGCATGGTTGTGCTTTGGATAGAGATTTGGAGTTATGGGCCAATGGTGATATGACTATGGTAGGGGAGAGGGGCATGAACCTGAGTGGAGGCCAGAAGCAGAGGATTCAGCTTGCCAGAGCATTGTATAGTGATTCTGACGTTTACCTCTTAGATGATCCCTTCAGTGCCGTGGATGCACACACCGGAGCACATCTCTTCAAGGTACAGTACATGAGAAATCTGCAACAGTTTAGCTGTAATGAGCTTCAAATGAAATGTACAATAATGTTACAGCACAAAGGCACAAAGCAAGAACCATAATCAAAACAGGAAAACACAAAAGTATTCCACCCATTAGACAATCTGCAAATTATCTATAAGCAATCAAGTACCAAATCTAATTAGTAACCGCAAATGGCTTACTCACTGAATCGTGAGATCATCAGCACAAATATTTCTTCAATCTGTGAAATAAACTAATTCATATTTTGCATCTGCAGGAATGTTTACTGAGGCTAATGTCCTCTAAGACAGTCATATATGTTACTCATCAGCTAGAGTTCTTGAGAGATGCAGATCTTGTTCTGGTAAGGTATCAACTCAATTTCAACATGTTACTAATTTTAACTTGTGATAAAATGGTTGGTAATTGTTAGCTTTAGGTCAAATAAAATGGCTATATTGTTGTAAATATCTTAATTTGAGCAGCTGCTAGGGATGCAAGTGGGTCATATTGGACTTTGGTCAGCTCATTGATGCATCCTAGTCCCTTTGCTTGACCATTAATGCAAGTGCCACACGTGCAAAATAAACATCCAACTAAATGGGAAGCGAACCACTAAGTGGGTGGGTTTTGTATCCTTCAAACCTGTCACAAGCTGTCATATTTCATTTTTGCAATAATTACTAAGAACATACATGTAGAGTTATATGGTCTAACATATGATTGCAAATGTCCAACTGTAGGTCATGAAAGATGGAAGGATTGTTCAATCCGGAAAATATGATGATTTGGTAGCAGACAGGAATGGAGAACTCTCAATGCAAATGGCTGCACATAACCAATCCCTTAGTCAGGTCACACCTGCAAAAGCACATGTCTTGACTAAAAATAAGAGTCACAAGAGAAGGCAGACTGAGCTCACAGAAATAGAATTAGATCACAATGTAATAGGCAGGGAATGCGAGGAGGAGCGCGAATCTGGAAGAGTTAAATGGGATATTTATCGCAAGTTTGTCAACTCTGCATATGGCGGAGCTCTCGTTCCTGTTATTCTTGCATGCCAAGTCCTTTTCCAGGGATTGCAGATATGTAGCAACTATTGGATTGCATGGGCAGCTGAGAGGCAGGAACAAGTAAGCAGGGAGAAGATGATAGGTATCTTTGTGCTGTTATCAGCTGGAAGTTCTGTGTTTATATTGGGAAGAGCTATTGTCCTTTCAACGATTGCCATTGAAACTGCTCATCAGTTCTTCTTAGGCATGACCAGGAGTATTTTTCGAGCACCAATCAACTTCTTTGACTCCACTCCATCAAGTAGAATCCTCAATAGGGTGAGCCAACTACCTCTTCATTTGAATATCGTAATAAAAACGCCCCTTACTTCCAGTTCTCACGGCTTAGTTTTCTGCTTTGCAGGCTTCAACAGATCAAAGCACAGTTGACACAGACATTCCCTACAGGCTTGCAGGGCTTATCTTCGCATTAATTCAGCTCCTCAGTATTATTTTCATCATGTCTCAAATTGCCTGGCCTATATTCATTCTATTCATAATTATAATTGCCATCTCTACTTGGTATCAGGTAAACCTTCATTCATTGCAATATGTTTTCCTCAGGTTTGAAAATGCTAGTAATTTGTAAAAACTTCATGCAGAGCTATTACATCTGTTCAGCTAGAGAACTAGCAAGGATGGTTGGCATAAGAAAAGCTCCAATCCTCCACCATTTTTCAGAGACTGTATCAGGAGCAGCAACTATTAGATGCTTTAATCAGGGAGAGAAGTTCTTCAGGAAGAGTCTTGCGCTAATTGATGACTACTCCCGCATCACTTTCCACAATTCAGCAACAATTGAATGGTTATGTGTTCGCATCAACTTCCTCTTCAACCTTGTCTTCTTTGTGATGCTAGTCATCCTTGTCTCAATGCCTCGAAATACTATTGATCCAAGTAAGCGTTCCCATGAAAAAATAGTATCGTATCTAACAGCTATAATTAGATCTGCAGTCTTGCATTGCATTCCTGCTTATTCTTTTTGGTAAAACAGTGTTTGTTGTTACAAAAAAAAAAAGGATTTACAGAGAAACCATGTGGTTGTATTTTACGTTTTTCAGAAACCCTAAATGTGTAACTCTACAGTACTTTGATAAATCACAATATTATTACATGGCTATAAACTCTAACCCATTTTGGTTTTCTCCTTGTTTAGGCCTCGCAGGGCTGGCAGCTACCTATGGCCTTAACCTTAATGTGTTACAAGCATGGGTCATATGGAATCTGTGCAACGTTGAGAACAAAATGATTTCAGTAGAAAGAATTTTGCAGTTCTCAAACATAACAAGTGAGGCCCCTTTAGTCATTGAGGACTGTAGACCAAGAGAATCATGGCCCTGGTGTGGAACCATTCAGATCGATTCTCTCCAAGTGAGGTACAACCCGGACATGCCAATGGTGCTCAAAGGCATAAGCTGCACAATTCCCGGAGAAAGGAAAATTGGGGTGGTAGGACGGACAGGGAGTGGGAAATCGACTCTAATTCACGCGTTGTTTCGGATTGTTGAACCATCTGAAGGACGGATACTCATAGATGATGTTGATATATCGCTTTTGGGAGTGCATGATCTGCGGTCAAGATTAAGTATTATACCACAAGAACCGACTCTTTTCCAAGGGACAGTCAGAACAAACCTGGATCCTCTACAGCAGCATCTGGACACTGAAATATGGGAGGTAAACAATCTATAAACTATAGTGCTGTGAAGATGCTCTTCCAAATGAAATTTCTTTAAGTGTCTATAGCTGTTATAGGTTTTCAAGAAAGAAGTTAACAATTTAAAGACAGCTTCCTTTATCGAGTCTAGTGCTGATTTTTTCCCCCCATCTTTTAGGTTTTGCATAAGTGCCGCCTTGAGGAGATTGTGAGAGAAGACAGTAGATTGTTGGATGCACCAGGTATGAAGAACTATCTTTCCTTGCAGCAGTTTTAATTCTCACGTTCCAAATTCCTTGCTCGAGATGGACAAGTTATATGACTAAAGTTTGATGTTGCAGTTGTTGAAGATGGGGGAAACTGGAGCGTAGGACAAAGGCAACTTGTATGCTTGGCCAGGGTATTGCTAATGAAGAAGAAAATACTTGTTCTGGATGAAGCCACAGCATCGGTTGATACCGCAACAGATAATATCATCCAAAAGACTATAAGGCAAGAGACAAACAATTGCACAGTTATTACAATTGCACATAGGATTCCTACTGTGATTGACAGTGACCTTGTTCTTGTCCTAGGTGAAGGTAAAAGATATCCACGAATAACCCATGTTTTTCCTTTGGTTCAACAAAAGCAATTCTAATTTATAAAAAACTATATTAAGCGATGGAAGTACCTTTTTTATTGTTCGTACTGCAGGTAAGATACTAGAGTTTGATTCTCCAGAAAATCTCCTCACAGATGAATCATCAGCTTTCTCAAAGCTGGTGATGGAATTCGTGGGAAGATCATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000310