BGIOSGA000333

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000333| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000333, complete gene.| tag = P0696G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000333

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000333, complete gene.

LocusTag

P0696G06.20

Ensembl Transcript ID

BGIOSGA000333-TA

Ensembl Protein ID

BGIOSGA000333-PA

Length

3751

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42589054..42592804

Sequence Coding Region

42592696..42592804,42591955..42592062,42591630..42591822,42591164..42591422,42591024..42591080
,42590899..42590946,42590536..42590622,42590393..42590450,42590201..42590268
,42590012..42590107,42589873..42589929,42589701..42589793,42589147..42589179
,42589054..42589065

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42589054..42592804 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42589054..42592804 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAGTCGCAGCGGCGGCCGCCACCGACTCTTCCTCCGATTCATCGCCCTCTCGTCGCTGCTCCTCATCGCCGCCGGGGAGGTCATCTTCGAGGAGCGCTTCGAAGATGGTTGGGAGTCCCGCTGGGTGAAGTCTGATTGGAAAAGGAGCGAAGGGAAAGCTGGAACGTTCAAACACACGGCAGGAAGATATTCTGGAGATCCTGATGACAAAGGTATACAGACAACGTTGGACGCCAGGCATTTTGCTATATCGGCCAAGATCCCCGAATTCAGTAACAAGGGCCGTACATTGGTACTCCAGTATTCCATAAAGTTTGAGCAGGATATTGAATGTGGTGGTGGATATATTAAACTTATGTCTGGTTATGTCAACCAGAAGAAATTTAGTGGAGACACTCCATACAGCTTAATGTTTGGGCCAGATATATGCGGAACTCAAACGAAGAAGCTCCATCTTATACTTTCTTATCAAGGGCAGAACTACCCTATCAAGAAAGATCTGCAATGTGAAACAGACAAGTTGACGCATGTTTACACATTCATACTAAGGCCTGATGCGTCCTATAGCATACTAGTTGATAACCGTGAAAGAGAATCAGGGAGCATGTACACTGACTGGGACATCCTCCCTCCTCGTAAGATTAAGGATGTTCATGCCAAAAAGCCTAAGGATTGGGATGACAGAGAATATATTGAGGATCCAGATGCAGTTAAACCAGAGGGCTATGATTCTATTCCAAAGGAGATTCCTGATCCAAAAGACAAAAAGCCTGACACGTGGGATGATGATGATGATGGCATATGGAAGCCTAGAATGATACCAAATCCAGCATACAAGGGACCATGGAAGCGCAAGAAAATCAAGAATCCTAACTACAAGGGTAAATGGAAGATCCCATGGATTGATAATCCAGAGTTTGAGGATGATCCAGACCTATATGTGCTGAAACCCTTGAAATATATTGGAATTGAGGTTTGGCAGGTAAAGGCTGGTTCGGTTTTTGACAACATCCTCATTTGTGACGATCCGGAATATGCAAGAAAAGCTGCTGAGGAAACATGGGGTGCAAACAGGGAGGCCGAAAAAGAGGCTTTTGAAGAAGCTGAGAAGGAGAGGAAAGCTAGAGAGGATAAGGAAGCTGAACGAGCAAGGGAGGAAGGAGAGCGACGGAGGAGAGAGAGGGGTGATCGGCACCGTGGCAGGGATTACAAGGACAGATACAAAAGACGTCATAGGGATCACTGGGATGATGACTACCATGATGAGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MGSRSGGRHRLFLRFIALSSLLLIAAGEVIFEERFEDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDPDDKGIQTTLDARHFAISAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTDWDILPPRKIKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTWDDDDDGIWKPRMIPNPAYKGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKAAEETWGANREAEKEAFEEAEKERKAREDKEAERAREEGERRRRERGDRHRGRDYKDRYKRRHRDHWDDDYHDEL</aaseq>

Gene Sequence

<dnaseqindica>1..109#743..850#983..1175#1383..1641#1725..1781#1859..1906#2183..2269#2355..2412#2537..2604#2698..2793#2876..2932#3012..3104#3626..3658#3740..3751#ATGGGAAGTCGCAGCGGCGGCCGCCACCGACTCTTCCTCCGATTCATCGCCCTCTCGTCGCTGCTCCTCATCGCCGCCGGGGAGGTCATCTTCGAGGAGCGCTTCGAAGGTAATAATCCGGCGTTTCCCAATTTAGTCCTAATTGCTTACCAGTTTTGGGGGAGCTCGCTTCGCATGCTCCCTAGCTTGAGCTTATAGTTATAGCTGCTGCTACTTCTGTGCTGGTGCTTGATTCGAATTGGCGAGGCTCACCATGCTGGATTCGCTGCTCCCGGTTTCCATTTTGGGCGCGGCTGCTTTTCCATGTCGCCCCCTGGGCTTGTGCGAGTATTGTATCCAAGGACTTTATGGTTACTGTCCCCGTCAATTTCAGCTTCACCTGTTAATACTTAAGTATGGATGGGGATGGAGGTTGGGTTGTTCGTTCAAAAAATGAGAGCTTCTCTTCAAGGGGCTAATCACAGGTTGATGTAGTTCAGGTCCGCTAGTGAAATTAGTAGTATTGAGCATTGTATGGTGTCATTGTTAACTGTTGTTTATCTAATTTTGTGACCGTGAAGAGCCTGAGTGTGTTATTGAACGGAAAATAGTTGGCATGAGTTGGTTTGAATGAGTAAGGTGTGATGCTTTGTCCAATTTATGAACTTCCAATGAATAGGTGCCATGCTGCTTATTTTCCTCCTTGTTTTGGTTGTCTGAGTGTATGTCATGACTCACGTGATTGCATGTTTCAAATATTCAGATGGTTGGGAGTCCCGCTGGGTGAAGTCTGATTGGAAAAGGAGCGAAGGGAAAGCTGGAACGTTCAAACACACGGCAGGAAGATATTCTGGAGATCCTGATGACAAAGGTCCGCTTTTTACTGTCATTGTCGTTCTATTTCAATTGATGACATTGATGGCTTTATTGTGAAAACGTTTATTCTGTATGCTTATCTTTCTTCCATACAGTGTTTGATCCTTGTGTTCTTTGTGGCATTCAGGTATACAGACAACGTTGGACGCCAGGCATTTTGCTATATCGGCCAAGATCCCCGAATTCAGTAACAAGGGCCGTACATTGGTACTCCAGTATTCCATAAAGTTTGAGCAGGATATTGAATGTGGTGGTGGATATATTAAACTTATGTCTGGTTATGTCAACCAGAAGAAATTTAGTGGAGACACTCCATACAGGTATGTTCTTACTTACAGGATTTCCAATTCCTACAAATATCTATTGTTCGTGTGGTAGTGTCGCAAGCTATATTATATAATTCCAGATCATGGTCTGTGACTGGATTATCAAAGGACTAATCCATGTATACAGGGTTTATTTGCTCTCCTTTTTCTAGTCTGCTGCTAAACGATGCCTGCTAACTTTATTTTCTCCCCTTTATGCAGCTTAATGTTTGGGCCAGATATATGCGGAACTCAAACGAAGAAGCTCCATCTTATACTTTCTTATCAAGGGCAGAACTACCCTATCAAGAAAGATCTGCAATGTGAAACAGACAAGTTGACGCATGTTTACACATTCATACTAAGGCCTGATGCGTCCTATAGCATACTAGTTGATAACCGTGAAAGAGAATCAGGGAGCATGTACACTGACTGGGACATCCTCCCTCCTCGTAAGATTAAGGATGTTCATGCCAAAAAGGTAACTTTTTATTTCAATAACTGGAGCTGTATGAAGACTAGAAATTACGATGTCATAACTAACATATATGCCTTCTTTTGCAGCCTAAGGATTGGGATGACAGAGAATATATTGAGGATCCAGATGCAGTTAAACCAGAGGTTTGTGTTGCCAAAACTCCACCCCTTACATGTTATACTGTGCATATGTGTTGTAACATTTCATTTGCCTTGGTCAGGGCTATGATTCTATTCCAAAGGAGATTCCTGATCCAAAAGACAAAAAGGTAATAAGCTATTAGATTAATCAAAACCTAACGTATCAACCATTTAAAAGCACCCAAAGACTGGCCAATTTAACCACATGTCTAGCTCTACACCTCTACCTACTGCCATGAGCCCATGGCATCTATTTAATTTATAGTAACTGCAACATAAGATTCTGACAGCAATGCAACTGATTCTAGTATAACTTCCTAGTATGCATTTTCAGTGAAGTTCTCTATATAACTGAAGTACTGAATGCACATGATAACTAATATGCATCTTTTGTTCTAAATCAGCCTGACACGTGGGATGATGATGATGATGGCATATGGAAGCCTAGAATGATACCAAATCCAGCATACAAGGGACCATGGAAGCGCAAGGTTTGTTTTTTTTGTCTTTGGCAACCAATCCTTCTTGGTGCACTATCTTTTAAGAGTTCATATTCATACATTCTTTTGTGTACAGAAAATCAAGAATCCTAACTACAAGGGTAAATGGAAGATCCCATGGATTGATAATCCAGGTATGCAAATAGTGCTACTAACTTTATGTGCTACATTTAGTGTGATATGACACTCAGCACCTGATTTTGAACTGGGCCTCTTGTTTGAACACCACTTAAGCTGTGTGTAATTCCAACTTTGCAGAGTTTGAGGATGATCCAGACCTATATGTGCTGAAACCCTTGAAATATATTGGAATTGAGGTTTGGCAGGTAACATTTATAGTGGTCTGCTTGCTTCATCAAATCCTAGTTTGGTCTGAATGATGTATATGCGACATAGACTCACGCTTTATTCATATGCAGGTAAAGGCTGGTTCGGTTTTTGACAACATCCTCATTTGTGACGATCCGGAATATGCAAGAAAAGCTGCTGAGGAAACATGGGGTGCAAACAGGGAGGTAACATCACATAAATATTTACAGAATTGTTGTCTGCTATTCATATCTGCTAGGCACAATCTTAGTTTTGTCTACATTGCAGGCCGAAAAAGAGGCTTTTGAAGAAGCTGAGAAGGAGAGGAAAGCTAGAGAGGATAAGGTCAAAATCTTAGTTTTGAGCACTTGATGTGGGAGCATGACTGGAATTAGAGAAGCTAACTGTAACTACTTTTGTACAGGAAGCTGAACGAGCAAGGGAGGAAGGAGAGCGACGGAGGAGAGAGAGGGGTGATCGGCACCGTGGCAGGGATTACAAGGACAGATACAAAAGAGTATATTTCTTCTACTGCTATATAACAAACTTGCATCTTGCTTTCTTCATGAACTAGTGAAGCCACCATTGAGCTATTAGAAGTACTTAGTACTGAGTACCGGTCACTGAGTCATAACCTTTGATTCCCCTAAAAAAACGCCTACTGATGCAAGATTATCATGTGGTCCCTTAGTTTCTTCTATACTATTGTCCTTCACACGTTCCTACATAAGCAAACAAATTCTCTCTAATATCTGATTTTTTTTTCCGGATCTAATATCTGATTAGATGTAAGGTATTTTTGGGAGGCTGTGGTGAAGTGTGTTGTGACTTGTGTAGTGCCGTAAGTTCATGATGTAGTGCAAGAAATATCAAATATGCAGAGTGGATAATGATTTTTTTAGCGAAAAGGGCATGAGCCTTGCTTATTGCATTAAAGGATCAAACAAGAGTTTAGGAAAGCAAAGATAGAGGTAGAAACAAGTGAATGCTATGATTTACTAGGTTACTAACATCCCTTTGCTCTTCTCTATGTTTCAGCGTCATAGGGATCACTGGGATGATGACTACCATGTAAGTTGCAAAAAACCTTCATTCCATCGATATCGAATTAGATAATAGCGGGTGACTTACATAGTAATGCTCCATTTGCAGGATGAGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000333