BGIOSGA000334

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000334, complete gene.| tag = OS01G08...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000334, complete gene.

LocusTag

OS01G0895100

Ensembl Transcript ID

BGIOSGA000334-TA

Ensembl Protein ID

BGIOSGA000334-PA

Length

4078

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42569336..42573413

Sequence Coding Region

42573308..42573413,42572188..42572288,42571996..42572106,42571662..42571726,42571495..42571576
,42571178..42571252,42570928..42570998,42570748..42570830,42569893..42569957
,42569733..42569807,42569336..42569455

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42569336..42573413 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42569336..42573413 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATTAGGGCGCCGCCGACGAGCCTGAGGCTCGCGCCGCCGCCGCCGGCCTCCGCCAGCTTCCGCCGGACCGCGCTCAGGACCTCCTTCCTCAACGGCAGCGTTTCACTTAGACTTATTCAAGTGCGCCAATCAAATGTCAACAGGTTTAAGTGCAATGGCATAAGAAGTAACCTCCTTGATAGATTTTCTAGGGTTGTAAAGTCCTATGCAAATGCAGTCTTAAGTTCATTTGAAGACCCTGAAAAGATCCTAGACCAGGCTGTTTTGGAAATGAATGATGATTTGACAAAGATGCGGCAAGCCACTGCACAGGTCTTGGCTTCTCAAAAGCGGCTTGAGAACAAATACAAATCCGCTGAACAAGCTTCTGATGATTGGTATCGGAGGGCTCAACTTGCTCTTCAGAAGGGTGATGAGGATCTTGCTCGTGAAGCCCTTAAGCGGCGTAAATCATATGCTGACAATGCAAGCTCCTTAAAGGCCCAGCTTGATCAGCAAAAGGGCGTGGTTGAGAACCTGGTATCAAATACTCAGGTTCTTGAAAGCAAGATAGCAGAGGCTAAGCAAAAAAAAGATACCTTAAAAGCCCGTGCTCAATCAGCCAAGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGAGGAAAAAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTCGGTCAGTTGGCAACTGATGATCTTGAAGGAAAGTTTGCATTGCTTGAGACTTCATCAGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGAAAGGAGAACTTCCTCCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCTAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAG</cdnaseq>

Protein Sequence

<aaseq>MEIRAPPTSLRLAPPPPASASFRRTALRTSFLNGSVSLRLIQVRQSNVNRFKCNGIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKSAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTQVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPFLDIEIENELNELRKKANEY</aaseq>

Gene Sequence

<dnaseqindica>1..106#1126..1226#1308..1418#1688..1752#1838..1919#2162..2236#2416..2486#2584..2666#3457..3521#3607..3681#3959..4078#ATGGAGATTAGGGCGCCGCCGACGAGCCTGAGGCTCGCGCCGCCGCCGCCGGCCTCCGCCAGCTTCCGCCGGACCGCGCTCAGGACCTCCTTCCTCAACGGCAGCGGTGCGTTTCGTATTCTTGCTCCCTGGCCCATCTCGTGTGCTTCCGGGAGGGGGATTGCGGCATGAGGCTTATGCCGGTGGATTCGCCTAGAGGTGTGGTAGTTTTAGTGGTGAATTAGTGGTTGTGGTCTCGTGGATGCTCAGCGATGCAACTGGTGATTTGCCGTGAGAATAGTTGGATTATGGACTATGGAGATTACCTCTGTTATTTCCTATGGTGGAGCATAGTTGATTTTAAGTTTGGTGGCAAATCTAATGGTTTAGTTACGTATGATAATTAGGTATGTGAATCCCACAATATTTTCATTCCATGTTTAGCAAAAATGAGCCCGTGGCAATTATTTTAGTTCAGTTCACTGTTTTCAAGTATATTTCAACCCTATGTAGTAGCGATAGCAAGCTTGGATATCTTGATGTGCATACAATACTAAATGATTCCTAGCAATTTCCCAGTAGAAGGATGATTCCTAGCAACTCGTTAGTGCACCTGGGGAAGCGATAGAAAGCATATATTTTTTTGGGTAAACCAAAGTTATTGGATAATGTTAGTTCTAATTTTATGCCTACCTATCAACATTGCCACTATATAGATTACACTTGATCCTTTTCAAATAGCCTTTTCTGAAACATGTTGTAATATAAACTGAACTCCAATTGGATCTGGCCTCTGAAAACACATACTATCACGTTCATAGTTGCCTATTGAAATCATTGTTTGAATATGGACCTCCTATTGTCATACTAATTCGGTTTTCAACATGAACTAATCCTATAATGTTACAGAACATTCTGTTTACTTCTGATCATGTATCTCAATGTACTTGATGCGCATGCTCTGACACACTGACATATGTGAATGGGCATGCAATTTCATTGATATTGCCATGCTGGTAATATGAATTATTATGTTTTCATTCAGAGAGCATGGCAAAGTGCAAAATGTAGTAATTTTATGATGAGCCAACAGGCAACAGCCATGGTAGTGACCTAACTTCTAATATACCTTTTTTTTCTCTGCAGTTTCACTTAGACTTATTCAAGTGCGCCAATCAAATGTCAACAGGTTTAAGTGCAATGGCATAAGAAGTAACCTCCTTGATAGATTTTCTAGGGTTGTAAAGGTGATTACTGTTGTTTCACCATTGTACCATTCACAGTTTTTTGTTTATTTAACTAAACTATTTGGCCTTCTGGTTATCTAGTCCTATGCAAATGCAGTCTTAAGTTCATTTGAAGACCCTGAAAAGATCCTAGACCAGGCTGTTTTGGAAATGAATGATGATTTGACAAAGATGCGGCAAGCCACTGCACAGGTTTGTTGTTATTTTAGTCAAAATTCTATAATTCACACTGCATGTTCTTTTCGTTACTGTCAATATGGCGTTGTTTTGGAAAATTGTATCTGCTGTCTTAAGCGTCCCTGAATATGGTATCCATATTAGTTTGGCCACCTGATTCTTATATTTCCATATTCTTGTATATTTGGTAGACTCTCTGAATACATTTGTGAAATGAAAGTGTACATATAGTTTACACTTATATTATGTTCTATTTGCTAAGATGGATTTTTTTTTTCTTGAAGGTCTTGGCTTCTCAAAAGCGGCTTGAGAACAAATACAAATCCGCTGAACAAGCTTCTGATGATTGGTAATGTTATGGGTAAATGCAAGCTTACTTTGTGCTCTATCATCTGTTTGTTTTACAGAGGATGCCCATTTTCTTGAAATCATAGGTATCGGAGGGCTCAACTTGCTCTTCAGAAGGGTGATGAGGATCTTGCTCGTGAAGCCCTTAAGCGGCGTAAATCATATGCTGTAGGTATCATGCAAATCTAAAGTTCTGGATCAAAGATCTGCCCATATCATATTGAGTAACTACACGATTAGTTTTAAAATTTCTTACTCTTTCGTGTGCTGTGTAATACATTATACTTTTGGTGTATTTTTACACTTCAACTTAAATGATTATGCATGTAGTGTCGAAGTCTGATATGTATCTTCTACTAGTTCGATATGTTAGTGTTGTAATAGTTTTGTTATTTTTCTTGTGTTCATAGGACAATGCAAGCTCCTTAAAGGCCCAGCTTGATCAGCAAAAGGGCGTGGTTGAGAACCTGGTATCAAATACTCAGGTGAGCTTATTAGCTTCAAGTTTCAACTGCTGGGATGCTATTTTCACACTCTGCATTATATGTATTATAACGAATTTATATTTATCTGGCCTCATATATGGCATAGAGCCATAGAGTGTATAGTACCTATTTCATACTATTCAACTAATTGCTATCATGTGGAATATGCCATCCTGTAGGTTCTTGAAAGCAAGATAGCAGAGGCTAAGCAAAAAAAAGATACCTTAAAAGCCCGTGCTCAATCAGCCAAGTATGCATCTATTGGTTGTTGATTATTCTTCAATTACTTTTTACTTTGGATGCTCTGAGCCTCTGACACTTCACACTTGGACATTCTTTTCCTTAAGGACTTCAACAAAAGTGAGCGAAATGCTGGGGAATGTAAATACTAGTGGTGCTCTTTCAGCATTTGAGAAAATGGAGGAAAAAGGTGCTCTTTTCATTTTATCGATTTTCTCTGACCGGAATTATTTGTTGTGTTAGCTAAAGTACATTTGTTACTGTATCACTTGTTCGTGCAGTGGGCACTACCACCATCACTTAATATAGGTCAACGTGGGATCCGCATAATGAAACTTTAGCAAATAAATATGTAAATGTAGAGATTAAGACCTTGAAATAACAGTAGACATGTCTTGGAGCATACATTCATCCTACACTTTTTAAATATCTGACTGGTATATTATAAAAAAAGTGATGAAATACGTAAGTTAGTTTCTTAAAAATATGCCTCATATTGAAGAGGCTGAAGAATATAATAATGACCCATATTTATTTATGAATTATAATATAGTGATTTTAGCTTAGACCACAGACATGCTCTATTTTTAAGCATAGATGGCTTGCCTCAAACATGTAAGAGAGAAACGAATGAAAGTACCGTCAGAGGGTAGCATAATCAAGTCAATACTTATCTACTTTCCAGCAGTGAAAAGTTTAGCCTCTTGCTTAAAGGCTGATACTTGATACCTTCAAACAATTATTTTATAAAGAAAATAAATTGGTATCATGATTTCGATTGATATATTTTGGGATCTTCTACCTTTGCACATGAGATGTTATGACTTATGAGTGATCTTGCCAAAGTATCTCCTCATCTTGTTTGAACTGTGAAGATCATGTCTCCTTGTCTTCTTAGCATCCAGTGATGCTCCAAGTTATGATAAATCATTTGACTTTTAATAATTATAGTACTTACAGTTGATTGTTGTTATTGTCAGTTATGGCAATGGAGTCCCAAGCAGAGGCACTCGGTCAGTTGGCAACTGATGATCTTGAAGGAAAGGTAAATTTGACATTGTGGACTAAATTTTCGTGGATATCACTGAGGTAATTAGATGATCTGATCGTTGTTATTTATTTGTGCACAGTTTGCATTGCTTGAGACTTCATCAGTTGATGATGACCTTGCACAAATGAAAAAGGAAATTTCTGGAAGCTCTTCGGTATGTATTAATGCTCAAACTATGAGACGATGTCAAGTTTCATTTAACACACAAGACAATACATCTGATATTTATGTGAACAGAGCCAGACCCACTGATAGTACAAGGGGTACTGGGGTACATGTTACCTTTAGCAGTTCTACTTAAACATAACATAACGATGGCATCTGCTGAGGGCGAACTACTAACTGTGCATTTCCCCCTAAAAGCATATGCCTGGATTGATCTGTTTCATTTGTTATGTGCTAATACGATGTAAATTTCCTGTTATCTACAGAAAGGAGAACTTCCTCCAGGTAGAACGGCAGTCAGCAATTCAGGAGCAGCGCGCCCTTTCCTAGACATCGAGATTGAGAATGAGCTAAATGAGCTGCGGAAGAAGGCCAATGAATATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000334

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000334&oldid=38058"