BGIOSGA000411

From RiceWiki
Revision as of 10:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000411| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000411, complete gene.| tag = OsI_046...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000411

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000411, complete gene.

LocusTag

OsI_04618

Ensembl Transcript ID

BGIOSGA000411-TA

Ensembl Protein ID

BGIOSGA000411-PA

Length

1464

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41462361..41463824

Sequence Coding Region

41463790..41463824,41463217..41463403,41462988..41463130,41462361..41462886

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41462361..41463824 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41462361..41463824 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCTGGGATTCTCATTCAAGTCAATATGAATGGGGAGTGGATTCTCACCCACCTGGTGGTTTACTTAAATTTTTGAGGAAAACCACACCAAGAACTGAACAACATGTGTGCAATGGGAGTTCATCGCAGCCAATCGACGTTGGCGACGACTGCAATGTTGGCGATTGCGTTAGGACTGAAAAGTGCTTGCCATGGACAAAAGAGGAGGATCTTAGATTGGTCAGTGCTTGGTTGAATAATTCAAATGATCCAATCCAATCAAATTACAAGAAGAATGACCAATATTGGAATGGTGTTGCTGCCGTCTACAACAGCACCACCCCAAAAAACAGGGCTAGGCAGGTCAAGCAAGTCAAGGATCGGGCAGTGAAAAGTTATGAAGAAGATCACAAAAAGGATGGTCCATTTATGTTTAAGCATTGTTGGGATGTGCTTAGCAAGGAACCAAAATGGGACGCCTATTTGGAACGTCTAGAAGATTTGGAGCCAGACAAGAGGAAGTTCAATGTTGAGGAGGGTGTGGGGCATCATTTCTCTCTAGATGATGCTAGAGATGAACGACCAATAGGGGGCAAGCAAGCTAAGGAGCAGCAGAAACAAAAAAGAAAGGACCAGGCTATTATAGATCTTGAAGAGGAATTCCACAAGCTTGTAGATGCTCAGAATACAGCAAATGAGGGCCACAAAGAGATGCTAGAGACACAGAGGCATGTGTCTAGTGAGAATGTTGAAGCTCGAAAGCTTAAGGAACACAAGGAATCAACCATGCTAGAAACATACAAATCGTTGATGATGCAAGATACAACTGGGATGCCTGAAGATGTGAGATCTGAGCACATGCTGGCATTGAGGTGTTTCAAGGAGAAGTTATTTGGCAAAACTGACTAA</cdnaseq>

Protein Sequence

<aaseq>MPWDSHSSQYEWGVDSHPPGGLLKFLRKTTPRTEQHVCNGSSSQPIDVGDDCNVGDCVRTEKCLPWTKEEDLRLVSAWLNNSNDPIQSNYKKNDQYWNGVAAVYNSTTPKNRARQVKQVKDRAVKSYEEDHKKDGPFMFKHCWDVLSKEPKWDAYLERLEDLEPDKRKFNVEEGVGHHFSLDDARDERPIGGKQAKEQQKQKRKDQAIIDLEEEFHKLVDAQNTANEGHKEMLETQRHVSSENVEARKLKEHKESTMLETYKSLMMQDTTGMPEDVRSEHMLALRCFKEKLFGKTD</aaseq>

Gene Sequence

<dnaseqindica>1..35#422..608#695..837#939..1464#ATGCCCTGGGATTCTCATTCAAGTCAATATGAATGGTATCTTCCTCTCTCTCATTNCTTNCGACTATCATCTTCTGGAGAATCACACAAGCTAGCATGATCCTCCCAACACTCTTCCGCCTCCACAATCGTTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTAAACCCTCGTCCAGGAATCAGCCGAGGCACACAATAACACATTGATAATAGAGTACAATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGATATATATGCTTTAATTTACAGCCACACTAGTCCAGTGACTATCGCTTCCTGAATAGGGCACTTCTAGATGTATATATGTTTGAGATATATGATTCTGATTTTTGTGTATACATGTCTGAGCAGGGGAGTGGATTCTCACCCACCTGGTGGTTTACTTAAATTTTTGAGGAAAACCACACCAAGAACTGAACAACATGTGTGCAATGGGAGTTCATCGCAGCCAATCGACGTTGGCGACGACTGCAATGTTGGCGATTGCGTTAGGACTGAAAAGTGCTTGCCATGGACAAAAGAGGAGGATCTTAGATTGGTAAGTTATTTTTTGGGGGGTTAATTATGATGTCCATGTGTTATATTAATAGAACTGCAATAAACATCTTTTGATAAATATTTTAGGTCAGTGCTTGGTTGAATAATTCAAATGATCCAATCCAATCAAATTACAAGAAGAATGACCAATATTGGAATGGTGTTGCTGCCGTCTACAACAGCACCACCCCAAAAAACAGGGCTAGGCAGGTCAAGCAAGTCAAGGATCGGTTTGGAAGAATTAAAAAAGGGTTGCATGGTTTTGTGCTAGCTGGAAGGAGGCTAATGCTTTGTGGGCTAGTGGTGAATCTGAAGTGAATTTGATGGACAGGGCAGTGAAAAGTTATGAAGAAGATCACAAAAAGGATGGTCCATTTATGTTTAAGCATTGTTGGGATGTGCTTAGCAAGGAACCAAAATGGGACGCCTATTTGGAACGTCTAGAAGATTTGGAGCCAGACAAGAGGAAGTTCAATGTTGAGGAGGGTGTGGGGCATCATTTCTCTCTAGATGATGCTAGAGATGAACGACCAATAGGGGGCAAGCAAGCTAAGGAGCAGCAGAAACAAAAAAGAAAGGACCAGGCTATTATAGATCTTGAAGAGGAATTCCACAAGCTTGTAGATGCTCAGAATACAGCAAATGAGGGCCACAAAGAGATGCTAGAGACACAGAGGCATGTGTCTAGTGAGAATGTTGAAGCTCGAAAGCTTAAGGAACACAAGGAATCAACCATGCTAGAAACATACAAATCGTTGATGATGCAAGATACAACTGGGATGCCTGAAGATGTGAGATCTGAGCACATGCTGGCATTGAGGTGTTTCAAGGAGAAGTTATTTGGCAAAACTGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000411