BGIOSGA000447

From RiceWiki
Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000447| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000447, complete gene.| tag = P0423B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000447

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000447, complete gene.

LocusTag

P0423B08.6

Ensembl Transcript ID

BGIOSGA000447-TA

Ensembl Protein ID

BGIOSGA000447-PA

Length

1695

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40770806..40772500

Sequence Coding Region

40771679..40772500,40771409..40771580,40770806..40771284

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40770806..40772500 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40770806..40772500 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCCGCGACCGTCGGCGGCGGCGGCGGCGAGCCGGAGGCGGCAGCCGAGTGGCACGCCCGCGCGGTGGGCGGGATGGAGTACGGCTGGTACCGCGCCGTGCCGGGCGGAACCGGCACGACGCTGCTCGCGCTCCGCCTCGTGCGCGGCGCAGAGGCGGCGGTGGCGGCGGCGACCGTCCAGGCGGCGCTGCGGGCCATCCTGGACGCTCACCCCGTCCTCCGCGCGCGCCTCCGCGGGTCCGCTTCCGGCAGCCCAACCCTCGCCTTCCCCTCCGCCGCCGCGCCGCCTCCGCCCCCGCTAGCGCTCGAGCTCCTCCCCGTGCCCGAGTCCGCCCCCGACTTCCCTTCCCTCCTCGAGCACGAGCTCAACCGCAACCCATGGACCGCCGCCGCCGCAACCGCAACCGCGTTCGAACACGAGCCCGACGCGCCACCGGTGCTCTTCGCCACGCTCTACGAGCTGCCGCCGCCAGCGGGTGGGGGGTCGGCGCTGTTCGTCCGGATCCACACGGCCGCGTGCGACCGCGCGGCGTCGGCCTCGCTGGTGAGGGAGCTCCTCGCGCAGCTGTCCGGCGATGGCGCCGCCGCCGCGGCAGGGAGCGAACCCGAGGACGCGGCGGTGCGCGCGTCGCTGGAGGAGAGGATACCGCAGAGGGACTCGTGGAAGCCGTTCTGGGCGCGGGGGCTCGACATGGTGGGCTACTCCATCAACGGCCTACGCACGTCGACACTGCCGTTCGAGGTGACCGGCACGGAGAGGTCCACGCAGATGCTGCGCCTCGGCTTCGACCGCGACGAGACGACGAGGCTGCTCGATGCGTGCAAGCAGAACGGAGTGAAGCTTTGTGCAGCCATGGCGGCCGCGACGCTGCTCGCTGCACGGCAGTCGAAGCTGCAGCTGGCGAGCAACCAGCAGGAGACGTACTCCATTGCGACCCTTATCAATTGCCGCAAGTTTCTCGAACCGGCCCTGGATGATCACAACGTTGGGTTCTACCATTCTGCTATCACCAACACGCACGCAATCCATGGCGGAGAAGAGCTATGGGAGCTGGCCAAGAGGTGCCAAGATTCGTATACCAACGCCAAGAACAACAAGAAGCACCTCACTGACATTGCCGACCTCAACTTCCTCATGTGCCGGGCAATCGAGAACCCGCAGCTGACGACGGGCTCTGCGCTCCGGACGGCGGTCGTCTCCGTGTTCGAGGAGCCGGTGGTGTACGACCTCTCCGATCTGCAGAGCAAGGCCGGCGTGGAGGAATTCGTGTGCTGCGCCACCGTGCATGGCGTCGGGCCATCCATCGGATTGTTTGACTCCATCAGAGATGGTCAGCTGGAGTTCGCGTGCATGTACCCTTGCCCTCTCCATTCCAGAAAGCAGATGCAGAAGATCTTGAACAAGGTGAAGCAGATCTTACACGAAGGGAGCATCGGAGATGATGAAAGCTTTGAAGATTGTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MDPATVGGGGGEPEAAAEWHARAVGGMEYGWYRAVPGGTGTTLLALRLVRGAEAAVAAATVQAALRAILDAHPVLRARLRGSASGSPTLAFPSAAAPPPPPLALELLPVPESAPDFPSLLEHELNRNPWTAAAATATAFEHEPDAPPVLFATLYELPPPAGGGSALFVRIHTAACDRAASASLVRELLAQLSGDGAAAAAGSEPEDAAVRASLEERIPQRDSWKPFWARGLDMVGYSINGLRTSTLPFEVTGTERSTQMLRLGFDRDETTRLLDACKQNGVKLCAAMAAATLLAARQSKLQLASNQQETYSIATLINCRKFLEPALDDHNVGFYHSAITNTHAIHGGEELWELAKRCQDSYTNAKNNKKHLTDIADLNFLMCRAIENPQLTTGSALRTAVVSVFEEPVVYDLSDLQSKAGVEEFVCCATVHGVGPSIGLFDSIRDGQLEFACMYPCPLHSRKQMQKILNKVKQILHEGSIGDDESFEDCT</aaseq>

Gene Sequence

<dnaseqindica>1..822#921..1092#1217..1695#ATGGATCCCGCGACCGTCGGCGGCGGCGGCGGCGAGCCGGAGGCGGCAGCCGAGTGGCACGCCCGCGCGGTGGGCGGGATGGAGTACGGCTGGTACCGCGCCGTGCCGGGCGGAACCGGCACGACGCTGCTCGCGCTCCGCCTCGTGCGCGGCGCAGAGGCGGCGGTGGCGGCGGCGACCGTCCAGGCGGCGCTGCGGGCCATCCTGGACGCTCACCCCGTCCTCCGCGCGCGCCTCCGCGGGTCCGCTTCCGGCAGCCCAACCCTCGCCTTCCCCTCCGCCGCCGCGCCGCCTCCGCCCCCGCTAGCGCTCGAGCTCCTCCCCGTGCCCGAGTCCGCCCCCGACTTCCCTTCCCTCCTCGAGCACGAGCTCAACCGCAACCCATGGACCGCCGCCGCCGCAACCGCAACCGCGTTCGAACACGAGCCCGACGCGCCACCGGTGCTCTTCGCCACGCTCTACGAGCTGCCGCCGCCAGCGGGTGGGGGGTCGGCGCTGTTCGTCCGGATCCACACGGCCGCGTGCGACCGCGCGGCGTCGGCCTCGCTGGTGAGGGAGCTCCTCGCGCAGCTGTCCGGCGATGGCGCCGCCGCCGCGGCAGGGAGCGAACCCGAGGACGCGGCGGTGCGCGCGTCGCTGGAGGAGAGGATACCGCAGAGGGACTCGTGGAAGCCGTTCTGGGCGCGGGGGCTCGACATGGTGGGCTACTCCATCAACGGCCTACGCACGTCGACACTGCCGTTCGAGGTGACCGGCACGGAGAGGTCCACGCAGATGCTGCGCCTCGGCTTCGACCGCGACGAGACGACGAGGCTGCTCGATGTGAGCCTAAGCTTCTCTCTCACATTTTACTTCCAAATTGCAAACACGCAGATCAGATCACTTCTCCTAACCACATTGCCAATTTGCCACTGATCTAGGCGTGCAAGCAGAACGGAGTGAAGCTTTGTGCAGCCATGGCGGCCGCGACGCTGCTCGCTGCACGGCAGTCGAAGCTGCAGCTGGCGAGCAACCAGCAGGAGACGTACTCCATTGCGACCCTTATCAATTGCCGCAAGTTTCTCGAACCGGCCCTGGATGATCACAACGTTGGTGAGCCCCTACATCTTTTACTCACATTGGTCACAATGCAGGACACTGCTCATTAATGCACCACGAGAAACACAAAACATTCTACAAGCAAAGCATTGCTGACATTACTGATCTGATTCTGCAGGGTTCTACCATTCTGCTATCACCAACACGCACGCAATCCATGGCGGAGAAGAGCTATGGGAGCTGGCCAAGAGGTGCCAAGATTCGTATACCAACGCCAAGAACAACAAGAAGCACCTCACTGACATTGCCGACCTCAACTTCCTCATGTGCCGGGCAATCGAGAACCCGCAGCTGACGACGGGCTCTGCGCTCCGGACGGCGGTCGTCTCCGTGTTCGAGGAGCCGGTGGTGTACGACCTCTCCGATCTGCAGAGCAAGGCCGGCGTGGAGGAATTCGTGTGCTGCGCCACCGTGCATGGCGTCGGGCCATCCATCGGATTGTTTGACTCCATCAGAGATGGTCAGCTGGAGTTCGCGTGCATGTACCCTTGCCCTCTCCATTCCAGAAAGCAGATGCAGAAGATCTTGAACAAGGTGAAGCAGATCTTACACGAAGGGAGCATCGGAGATGATGAAAGCTTTGAAGATTGTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000447