BGIOSGA000461

From RiceWiki
Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000461| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000461, complete gene.| tag = OS01G08...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000461

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000461, complete gene.

LocusTag

OS01G0857300

Ensembl Transcript ID

BGIOSGA000461-TA

Ensembl Protein ID

BGIOSGA000461-PA

Length

3405

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40530548..40533952

Sequence Coding Region

40533639..40533952,40533498..40533540,40532946..40533068,40532660..40532779,40532506..40532584
,40532229..40532345,40531888..40531985,40531473..40531563,40531244..40531363
,40531084..40531154,40530548..40530745

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40530548..40533952 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40530548..40533952 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACCACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACCGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MRTARTPASAARGGRALYELYRAASRAAAPAALLWRRLRGLEHPSRWPERLGRPSVARPRPGSPLVWFHAVSLGEGMAALPVVRHCARLHPGLPILLTTTTLSSFEVMKDLLPDGVIYQFAPLDCPDAIESFIGYWKPNLILLMESELWPNLILSAAEKGIAVVLLNARMSLKSFNRWSLPLGLQLVSLMLSKLSLVIPLSTIQAVRFQLLHAPPQIIHFAGDLKYAVGDIAAGEKEVAAIEDLQQQFSNRPIWMAASIHKGEDEIILRVHDELTRAYPTLLLILVPRHPEDSKNVSQTLKKQKVNFVLRSTREVVSSNTSIYVVDTLGELRMLYRVTPIAVIGGSFLPGLAGHNISEAAAVGCAVMTGPSVGHFYHMLVEMWQINPLAVKQVKGEYELLEALKQLLGDSRALEACQRAAKDAFSFMSDGVVNRVWNLVHPFTIGSQTDTCDSFSSS</aaseq>

Gene Sequence

<dnaseqindica>1..314#413..455#885..1007#1174..1293#1369..1447#1608..1724#1968..2065#2390..2480#2590..2709#2799..2869#3208..3405#ATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACCACTACCCTCTCATCCTTGTAAGCTTCCCCCATTACCGCAAATACGAGTTGCCTGGCTCTCTCATTTCCGTGTAATGTGGCCATATTCTATTTCGGTTGTTTTGATTTCAATGCAGCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGGTGAGCTCGGAAATTGCTCTTGTACTTTCAGATCCCTGTCGTGACGGCCGGTTTAGTTTTCTGAGAAATGGCGTATGCACAACAAATTTTTACTGATGGACTGTTCTTGAAAAAAAAAGGACATTTTAGGTTCGAACTGTGTCAAGGCAGATAGATATTGTCTGTTCATTATATGTATCCCTTAAACTAAGGTCATATTATACCCGTTGAACTATGATAGTAAGGTTTCGTAGTATTAAACCTTTAAGGTGGTAATATTCGATAGTACAGACACAGATCAAGCAAAGTTTTGGGAACAGATGGAACTTGTTTAGATGAAGGGAATCACGAATAGGCTAACAGAAGGATAGTTTAAATGTTTGATATGCCCTATATACATCTACGGTAGCTTATTGTTGTTTTACATAACTGAAATACATATGTGTGTAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGGTAAGTTTTTTTTTTCTCATAATGACTATTTTCTACTAAGTGGTTAGGCTTCCCTTTGTTACCCTTGTTTTTTCCATGTGCAATGGCAGATTAGCTATATTTTCGGTCCATAGTACATTCTTTCACTATTTAATTATCTGCTGTGAATGACCTTCCTATTTTTCAGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACCGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGGTATGGAGTGATGGGGTTCTAAACCTTATTTTGATGTAAAAATATTGCCATTGTATTCATTTCTATCTGTTCCAGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGGTATGCGCCATGCCAATTTTTCTCTGGCTTCCTATGTTCATGAGAGTATGTTTGAAATAAACATATGAGTGATGCATTTCTCAAGGATTATCTTGGGAGCTTGAAAGATAACCAGGTTCACAAACTCAATAATTTATAGAGATTCATGTGATTTACCTAGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAAGTAAGCACCTCAGACACCCACCTTTTCTTTTTATTGGATCAGTATTATCTGCTCTTCCAAGGAACTGTGTGCAGGACTAAAACTGTATATATGTAGCTGTTTTGCCTATGGTGATGATCACCATTGATATCCCTAAAGTCATTGCTGACTTCTTTATGCTTTCCTGAATAATTGAATCCTTGCCTTACTATGCTTATGTTCTCAACATAAAAACAATGTTGACAAGCTTCCTCTCTTTTTCAGTCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAGTATGTCAATTGTCTTCCTTACCCTTTTATATCTGGTCCTGTTTAGTTGATGAAGTAGTTGGTGGGTTGTACTGCTTATCTTTTAGTTTTTTTTAATACATTATCATATTGGGTAATCTATAGGTGTAGCATTGTTGTAATGAAAAAAAGGGAACTAACTTAGTTCACTGTATGAAGCTTGAAATTAATTGCTTATAACTGTTTGTATACAATTACTTGAAATTTCTTATGGTTCTAGAGCATGTAGCATATGATTCTCACTTCAATGCTGATAGTATAATATGTATGGGCCACATCTTTAGTTCTTTACTCATCTTCTTTTAGACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTTTGTGCTATCTCTTATGCCTTAAGTTTGCACATTTTTTCAGTATGGAGTATGGACTGTGTATATTCTTTTGAATGTTAGTTAATGAATGAAATACCATGGAAAATAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTACGCAAGAGTGCAAGACACATCTGACTATTTTGAATGACTTTTTCTACAAAATCGGAATGTCTAGAGTTTCATTAATTGTCTTTCAGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTGATAATCTGTCTTGTACTTTGTTATTTATCTAACTGACACAAAAAATGCCGCATCATTTGTGCACTATGTTCGATTAAGAGTGGGATTACTACTATTTCGTGGCCTTCTTAGGGGAGGTATTTTGTTAATTATTGACTTGGCCTTGTCCCTACTTCTGGAAATTAGTTTGGACGGTAACAGGATGAATTGCCTTCTACTTGCTCTTTCAATAAATTATGCTTGCAATGTGGGTATGCTGCTTTACTGCATGGGTGATTCTTTTTTTTTTACACCTAAACATCGCAAGGAGCTACAGCCCCTTTCATTCTATGAGGATTAATGCAAATGTTTTTCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000461