BGIOSGA000463

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Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000463| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000463, complete gene.| tag = OJ1402_...")
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Gene Name

BGIOSGA000463

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000463, complete gene.

LocusTag

OJ1402_H07.29-2

Ensembl Transcript ID

BGIOSGA000463-TA

Ensembl Protein ID

BGIOSGA000463-PA

Length

7232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40510129..40517360

Sequence Coding Region

40517028..40517360,40516240..40516710,40515318..40515528,40514604..40514761,40514456..40514526
,40514257..40514362,40514091..40514180,40513681..40513729,40513238..40513368
,40513102..40513155,40512737..40512833,40512376..40512584,40512184..40512264
,40511769..40511834,40510409..40510477,40510129..40510170

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40510129..40517360 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40510129..40517360 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCCCCGCGCCCCGCCCCAGGCGGCCGTCCCCGGAGGAGGGGCCGGTGCCGCCGCCGGTGGGGTCACCATGCGGATGTTCCACGGCGACGTGTTCCTCGGCGAGGCGGAGGTGTTCCCGATGAAGCAGGGGGCCGAGGGGAGCCTGCCGTTCCCGAGCAACGAGATCCGCATCAGCCACCTCTCGCCGACGAGCGAGCGGTGCCCGCCGCTCGCCATCCTGCAGACCATCGCGCCCTTCTCCGTGCGATGCAAGCTCCAGGCCAAGCTGATGCCTCCCCACCCGAGCCTACACCGCCTCTACCTCACTTGCTTCAACGAGTACAAGAGCGCAGTGGTAGTAGTTGGAGATGAGGAGCTACACCTAGTGGCAATGCCGAGCAAGGTGGAGAAGGTGCCATGCTTCTGGTGCTGTTCAGTACGCTCTGGGATCTATGCAGCATCTGTTGGGATGCTGAACTTGCGGTGCCTTGCTATCGTATTTGATCTCGATGAAACCCTTATTGTCGCTAACACAATGAAGTCCTTTGAGGACCGGATCGAGATGCTTTCCCGTAGGATGGATATTGAAGACGACCCCGTCAGGATAGCAGGGATGTCTGCAGAAATCAAGCGGTATATTGAGGACAGGGAGCTGCTCAAGGAGTTCATTGACACAGATACAGTTACAGATAATGGCAGAATCGTTGGGACCCAAAAGGAGGAAGTTCTGCCTATCTCTGGTGGGCAGGAGCGTGTTCTCCGGCCTGTTATCAGGCTGCCAGAAAGGAATGCGATTCTAACTCGCATAAATCCAGAGGTTCGCGATACTAGTGTTTTTGTAAAGCTAAGGCCTGCTTGGGAGGATTTGAGAAGTTACCTGACTGCTAAGGGACGCAAACGATTTGAGGTCTATGTATGTACAATGGCTGAGAGAGATTATGCTCTTGAGATGTGGAGGCTTCTTGATCCAGAAGCCAACTTGATAAGCTCTCATAACCTTGCAGAGCGTGTAGTATGTGTAAAGTCAGGTTCGAAAAAGTGTCTGCAGAATGTTTTTAAAGACAAAGGATGCCATCCGAAGATGGCCATGGTAATTGATGACCGACTGCAGGTTTGGGATGAGAAGGATCAACCTCGAGTTCATGTTGTCCCAGCATATACTCCATATTATGCCCCACAAGCTGAGATGGCAAATGCTGTGCCTGTGCTTTGTGTTGCAAGAAATGTTGCTTGCAATGTTCGTGGTGGTTTCTTCAGAGAGTTCGATGAAAATCTATTGAGAAAAGTGTTTGAACTAATGTATGAAAATGAGTTTCTAGATCTTCCATATGCTCCTGATGTTGGTGACTACTTAGTCTGTGAGGACACTAATTTTGCACCAAACAATAAGGATGTTGCCCCTATACCTGAGGGTATGAGTGGAGCTGAAGTAGGGAAGAGGTTGAATGGGCTGGCATATCCTAGAGACCAGAAACAAATACCATCATCAACCCGTTTGTCAGATGACGACGGAGTGGCACTCCGTGGCATTCCAGGTGGTACAAATATCCAATCTAACGGGGGATCATTGGCAACAACCCCCTCATTATTTGTCACGGTGTTGCAAGAAATTGGACGGCTGTGCGAATCCAGGGTGGAGTTCAGGTCTACTGTAAGCAGTGGAAAAAACATGCAATTTTCTGTTGAGGTTCTATTTAGTAATGAAAAAATCGGGATCGGCATTGGAAAAACAAGAGATGAAGCCCAAGTACTAGCTGCTGAAAAAGCTCTCCAGAATTTGGAAAGCAATTACTTGTCATTCATGGCTCCTGTTGCTGGAGTTCTTAATAAAGATGTGAACAAGCCTCCTGGGAGTGGAAATGGCTTTCTCGAAGATATTACTCTCTCAGAGGATATTTCTATGGAAGAGCCATCTGGAAGTACATTAAAAGAACAGGATCATTCAAAAGCTTTGGATAGGTTGTCCTCTGTTATAAGTCTTATTAGAGAACTTTGCTTGGAGGACCAACATGTAGTATTTCGCGATCAAGTACGGGATTCTGGCTCAGCATTAAATGGAGAATACCATTTCCAGGCTGAATTAGGAGGACAAATTCTTGGGAGGGGCATTGGTTTGAACAAAGATTTTGCGAAGCTTCAGGCTGCAGAAGAGGCGCTGAAGACCTTGAAAACAACTACGGACCCACAAATCAAGAAGCATTTGAGACCAATGCAACAGCTGAATTTCCCCTTATATCCCACACAGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MATPRAPPQAAVPGGGAGAAAGGVTMRMFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRISHLSPTSERCPPLAILQTIAPFSVRCKLQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKVEKVPCFWCCSVRSGIYAASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDIEDDPVRIAGMSAEIKRYIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLPISGGQERVLRPVIRLPERNAILTRINPEVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEANLISSHNLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMVIDDRLQVWDEKDQPRVHVVPAYTPYYAPQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELMYENEFLDLPYAPDVGDYLVCEDTNFAPNNKDVAPIPEGMSGAEVGKRLNGLAYPRDQKQIPSSTRLSDDDGVALRGIPGGTNIQSNGGSLATTPSLFVTVLQEIGRLCESRVEFRSTVSSGKNMQFSVEVLFSNEKIGIGIGKTRDEAQVLAAEKALQNLESNYLSFMAPVAGVLNKDVNKPPGSGNGFLEDITLSEDISMEEPSGSTLKEQDHSKALDRLSSVISLIRELCLEDQHVVFRDQVRDSGSALNGEYHFQAELGGQILGRGIGLNKDFAKLQAAEEALKTLKTTTDPQIKKHLRPMQQLNFPLYPTQR</aaseq>

Gene Sequence

<dnaseqindica>1..333#651..1121#1833..2043#2600..2757#2835..2905#2999..3104#3181..3270#3632..3680#3993..4123#4206..4259#4528..4624#4777..4985#5097..5177#5527..5592#6884..6952#7191..7232#ATGGCGACGCCCCGCGCCCCGCCCCAGGCGGCCGTCCCCGGAGGAGGGGCCGGTGCCGCCGCCGGTGGGGTCACCATGCGGATGTTCCACGGCGACGTGTTCCTCGGCGAGGCGGAGGTGTTCCCGATGAAGCAGGGGGCCGAGGGGAGCCTGCCGTTCCCGAGCAACGAGATCCGCATCAGCCACCTCTCGCCGACGAGCGAGCGGTGCCCGCCGCTCGCCATCCTGCAGACCATCGCGCCCTTCTCCGTGCGATGCAAGCTCCAGGCCAAGCTGATGCCTCCCCACCCGAGCCTACACCGCCTCTACCTCACTTGCTTCAACGAGTACAAGGTTTGCCCCCACGCAATTTCTCAACAATCGCTCATGTCCATCGCTTTGTATTAGTATAGCTGGTACTCCCATTCGAAATCGAAGCGAAATAAGTAGTTTACAGCGACTACTTGGGAAATGGTATTAGCGCCACTTCTAAATTTTGGGGCAATCACCAGTAATCAAAGCGTTTTACACATTCTATTATGGATCTTCGATGGGTTGTGTGTTTGATGTGGTTTGATTCGTTCGGATGATGTTTCCCATTGATGATATTTCCATCAGGGGCACGAAATAATAGGATTTATAAAATTTTTTGTCTCCTTGGGTTTGTGTAGAGCGCAGTGGTAGTAGTTGGAGATGAGGAGCTACACCTAGTGGCAATGCCGAGCAAGGTGGAGAAGGTGCCATGCTTCTGGTGCTGTTCAGTACGCTCTGGGATCTATGCAGCATCTGTTGGGATGCTGAACTTGCGGTGCCTTGCTATCGTATTTGATCTCGATGAAACCCTTATTGTCGCTAACACAATGAAGTCCTTTGAGGACCGGATCGAGATGCTTTCCCGTAGGATGGATATTGAAGACGACCCCGTCAGGATAGCAGGGATGTCTGCAGAAATCAAGCGGTATATTGAGGACAGGGAGCTGCTCAAGGAGTTCATTGACACAGATACAGTTACAGATAATGGCAGAATCGTTGGGACCCAAAAGGAGGAAGTTCTGCCTATCTCTGGTGGGCAGGAGCGTGTTCTCCGGCCTGTTATCAGGCTGCCAGAAAGGAATGCGATTCTAACTCGCATAAATCCAGAGGTACAATTCAGATAGATCATGTATAAATATATTTCATTTAAATGAAATGTTGTTATCGTTTGCCTGTGTGCATGTTTTTGGCCTGGGGTTATCTAGAATTACACTTTGAAATCAGTTGGACCTATTCCTGGGTTGGAAAAATAGAACTGGGCTCCAATTTGCTGCCCACAAAAGGCATGCTGTATGGCTATTTGGTTATTAGCGATGGTACAAAAATAAGTTCTATAAATGACTTGTAATTGCTGCAGTTTTGATCCTCGGATAAGACATATTTGTTCAGGCTCATTGTTTCTACCTACAGGTCTGTATGATCTGCATAGTTACATAATTTGCTTTGTACATGTGATGTTTATGAATAAAACAGATGCAGAAATGAACTTGTAGCCTGATGGTTTGGGAAATGATGAAATAACAATTAACACAAAGTTTGACAACCTACACACAATGTGTTATTATCAGCTCATATGTTTGCTGCCAATTAGAAAAAAGAGATTCTATTTTAGTAATTATTTTTGTAATGCTTATCTGAGACGATTAATCAAGCTGATTAAGTCATTCTGGACTGAAAATGGGCTCAGTATAATTCTCATATGTCTAGTTATTCAAAATTTTGAGATAACTAGAGTTTTTAATTATTGTAGAATTCTGTAATTAGTTCCCTTTTTTGAGGTGATTACCTTATCCCCTGTCTGATTTTAATACTCTGCTCAGGTTCGCGATACTAGTGTTTTTGTAAAGCTAAGGCCTGCTTGGGAGGATTTGAGAAGTTACCTGACTGCTAAGGGACGCAAACGATTTGAGGTCTATGTATGTACAATGGCTGAGAGAGATTATGCTCTTGAGATGTGGAGGCTTCTTGATCCAGAAGCCAACTTGATAAGCTCTCATAACCTTGCAGAGCGTGTAGTATGTGTAAAGTCAGGTAAATTTTCAAGAAATTGGAGGTTCTTTTTTTTCTGCTATCTTTCATTGCTTTCTTGTCTCAACATGTTTTGTTATATTGACATCGTTACTAAACACAGAGTAGCTACTTTAAAACACTGAACACGAATATTCTGTGTCATCTATCTTTTCATGTACAATGAAATTATGTTGTGTTTCCAAGTTATTGAGAAGGAATGGGTTCGGTATTGCAGATTAGTGTCCCAGAGAGAAAACCCATAGTTTTTCTAGCATGTATCGTTCATTCCCTTAGTATTGTATTTCATTCTTATCCTTACAACTTCAAATATAGTGCATAAGTAGTACTAAATATTGTTTAAATTTGTATAAAACTTATTCTTAGTTTAAACAATATAATATTTGTGTAGAATGCTTAAGTGAATGAGAAATTGCGCTTTGCCATTGCCCATTATATGGATAATACATAACATAGATCTTCGCTTTACTATCTCTATTGTCTCAGCTCTGGACTATGTTCCTGCCATAATTTCATGGACATAACCACCAATATTATTCATTATTCTATTTCATGGCAGGTTCGAAAAAGTGTCTGCAGAATGTTTTTAAAGACAAAGGATGCCATCCGAAGATGGCCATGGTAATTGATGACCGACTGCAGGTTTGGGATGAGAAGGATCAACCTCGAGTTCATGTTGTCCCAGCATATACTCCATATTATGCCCCACAAGCTGAGGTATTTATTTGTATTTTATTGCTTACACTTTTTTTGGTCAACAATATCTCATTCTGGACCCTGTTTGCATATTTTAGATGGCAAATGCTGTGCCTGTGCTTTGTGTTGCAAGAAATGTTGCTTGCAATGTTCGTGGTGGTTTCTTCAGGTTGGTAAAAAATATAAGATACAGTATGTGCATTCTGATGATATCATGCTTACTGTTGTAATGTTATTCTTTGTGTTCATCAATGCATTGCAGAGAGTTCGATGAAAATCTATTGAGAAAAGTGTTTGAACTAATGTATGAAAATGAGTTTCTAGATCTTCCATATGCTCCTGATGTTGGTGACTACTTAGTCTGTGAGGTAACATTATTGAATCGTTGTTATTTTGTGTGTGTTTATTTTCTAAATGGTTATCCAACTGCTAATTTTGTTCCAGGACACTAATTTTGCACCAAACAATAAGGATGTTGCCCCTATACCTGAGGGTATGAGTGGAGCTGAAGTAGGGAAGAGGTTGAATGGGCTGGTGAGTGCTGATCTTCGTTTCTGCTTTGCTTTGATTTTTAGGGACTTGATTTTTTTTTTCACCTAGAGCAAATCAGCTAATGATGCCTATTTCTATGGTAAGCGCTGTTATACAGCATAATATAAATGCTGTCATGTAGCTTGATTTCAATTATTTATAACCATCTACTTTGTGTTATTTCATTTTAGAAGAAATGTAGGTGTATCAAATTGATCCTTCTTTGGCTTACAATTGGATTTGTCCTTGTATCAAAATTAAGTCCACAGTTCTATCACTTAGCTAGCAAAATCATCACTAGTTTCTTTATCAGTTTGTAATAGACTAGTATATAATGATCATGCTAGTGTGTTCCTTATTTCAGGCATATCCTAGAGACCAGAAACAAATACCATCATCAACCCGTTTGTCAGGTACTTACCTCATGTCCATTATCTTTATTGGCTTTCTTTTGGTTCTTCTTCCTGGGCTTTCTTGAACCCTTGCATTTATAAATCACTTTAGTCATTTTTTATTATTACCTTGCGGACATTAAAAGAGGGAATGGTTTTCTCTGTACCATTTTTTCCCTGTAAAGGAAAGAGTACTCTACTATGAAATGCAGCAGCATCAACATTATGCTTGAAAATCCTAATTGTACCTCACTATTATTAAAGAAGTACAATTCATATATTGTTTTGGATCTGTAATTTGATGCTTCGAGTAACATAAACCAATCTTTGTAGATGACGACGGAGTGGCACTCCGTGGCATTCCAGGTGGTACAAATATCCAATCTAACGGGGGATCATTGGCAACAACCCCCTCATTATTTGTCACGGTGTTGCAAGAAATTGGACGGCTGTGCGAATCCAGGGTATTTGGATCTTTAAGATTATATTTGTTTTCTGCCATTGCCCTTATGAGCTGAGAGTAATCTCCTGTTCTTTCTTCATTAGGTGGAGTTCAGGTCTACTGTAAGCAGTGGAAAAAACATGCAATTTTCTGTTGAGGTTGGCATTTTGAATTTTTACATATTATACTTTGTTTCCATGTGGTCTTGGCAACAGCTTGGGCTGAAATTCTAATTGAGAAAAATATATATTTAGAATGTTGAGACACATTTCCTTTGGCGTCTCAACTCTCAACTTCAGCATCAGTCCAGTGCTTTTGCTCTGAAGCTGTTTGCTTGCGGGTGCATTTCCAGATTTGTATAGCAATGCTGTGATATCTCTACTTAATCATGTGATCCTCATGTTACCTATACATATGATGTTCCAGGTTCTATTTAGTAATGAAAAAATCGGGATCGGCATTGGAAAAACAAGAGATGAAGCCCAAGTACTAGCTGCTGAAAAAGCTCTCCAGAATTTGGAAAGTGAGTATAATCCTTTACATCTTGATTATTGCAAGCTTGAAAAGTTACGTTTGTTTTACAATTCCGTGTTTACAGGTGTCATTCTTTTTCTAAAGCATTCACTGATGAGAAATTCCATGTGCCTTAAATCCTGTTATCTGGCTGACTTGCAGGCAATTACTTGTCATTCATGGCTCCTGTTGCTGGAGTTCTTAATAAAGATGTGAACAAGCCTCCTGGGAGTGGAAATGGCTTTCTCGAAGATATTACTCTCTCAGAGGATATTTCTATGGAAGAGCCATCTGGAAGTACATTAAAAGAACAGGATCATTCAAAAGCTTTGGATAGGTTGTCCTCTGTTATAAGTCTTATTAGAGAACTTGTAAGAGATGCTGCTGCTGCACTTATATTCCATTTTAGTGTCCTTATTAATGTGTTATTTCTTTTCTTAACTTTGCTTAATTGAATTGTAATTTGCAATTGCTATTTCTAGTGCTTGGAGGACCAACATGTAGTATTTCGCGATCAAGTACGGGATTCTGGCTCAGCATTAAATGGAGAATACCATTTCCAGGTTAATTAACTTGCATAGTCGCATCGTTCTAGAATTCTCCTAGCATAGTTGTGGGCCTTCTGGCTTATACCACAGTGTACCCGGGTGTTGCAGTTCTGGAGCAGACCAGTTCTCACCTGTCTGGTATTGGGTTTTTGTTTGAAGAAGGGAACTAGCTGGTTACTACTTGCCAGAGGGAGCCGGCTGGTCGCTACCTAGTTTTTTTTAGCTTATGACAAATATTCCTGTATTATACTGGCAAGTGTTTAGAAACTAAACTAAATTGGATATTTGCTAATTGCCTATTTAAAATTAACTTATATGAGCTTGTTAATGCAATTAATGTTGCAACTGTTGTTATCCTTTGTAGGCTGAATTAGGAGGACAAATTCTTGGGAGGGGCATTGGTTTGAACAAAGATTTTGCGAAGCTTCAGGTACTATATTTTATATTGCTCTCGCCTTTTGTTCATAGCTTTTATGTGTTGATGCATTGCCACTTTAAATACTTTTTTGAGTTCTGTCGTTCTAAATTATATTTGCATCAGGCATTGCACTGACTTGCACGCAGATGTGATAAATGAGGCACCTGCTGGCTTGCAAAGATTGTAGTGTTGTACATTTCATATGTATATATCTACATGATATTGTGCTTTATTGCAGAAAATCTGTCTAATAGGAATTGTGTATACTAATCTAACTAGGATCTGACTTTTGACATTTGCACAATTATTGGGAATACTAAAGATGCCTCTGTGTTTCGAGGTTGCTGCCTCAAGCCTGCAACAAGCCCGAATCACATTCTCCTAGAATGCTCCACCAGCATGACTTTGTCCAAAATTAATGTCCCAACATTAATTGCACTAGCAAGCTTGAACCAAGAAGCTGCCTTATAAAATTCTACCTGTTTCAGCTGGCCTCATAATATTGTGCAAATTTGAAGTTGTTCCTGAAGTGGCCAAAACACCCCCGTAAACTAGGTTTGATATTTAATGGCAGGTGAGCTTCAAGTCTGCTGACATGAACATGAGATGTAAATATACTCCTTAACATCGACTAAAAGGGGGGACATTCCTATGCACACAAGCTTTAGGTGCACTTTGTGCACACCAACTAACCAATGTCACCAGAAACTCTTAAATAAAATTGTTCATTTACTTCTAATCTTACTCCACCTATATATAAGTTTTGGAATTCAAATCCATTAAATATCAGCGGTTACCAGAAGGAAAAAAAAAGAAAAGAAAAAAACTCTCTGTTTTATGAGTATGTATATGTCAGTTGGTGTGCACAGTGAGTGCACCAGAGCTTGTGTTCACGTGATATGTTATGGCCAAAAGAGTTTGCAGGAATTTGGAAATGCCATCTTTACCATTACCAATTTGGCCAAAAGGGCTTGTGGGATTTCTAACAAATTAAATCCTTCTCAGGATTCGAACCCATGAATGCTGTCCACTTGGTCCACACATTACCATTATTAGGATATCATTTTGAACAAAAGTAGGTCTTCTAGTGACTTTGATACATTTAAACTTCAAAACTGAATGGAAATATTTTGGCCAGTAAAAACTTTATCAGGACTTGCCTAACTATCCAGTTACTTGCATTAACCACTAATAACTGCCTGGTGCAAAGTGTGCTGGTTCTGTCTCGAGGGGGCAACAGCACTGTTATAGCCTCTTTATTGCTGCGGTTTCCTGATACTCACCACTAAACATTTTGTTTCAGGCTGCAGAAGAGGCGCTGAAGACCTTGAAAACAACTACGGACCCACAAATCAAGAAGCATTTGAGACCAGTAAGGTAGCTATTTGATGCTTGCCGTTTTTGCACGTCAACATATCTTAATTTGCAGATGAATGCTATTTTTATTTACGAATAATGTTTTGTTCTGGACTTCATTGAGTATTTTTGCCAGTATCTCTTCCTAAAAATATCTTGTATTCTGGATAGTAAGATGTAAATTAATCATTATTCAGTCCTTATGTCTCTCTTATCTTACAGCTTGTCATCTCTTCTTATTATTTTTATTCCAGATGCAACAGCTGAATTTCCCCTTATATCCCACACAGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000463