BGIOSGA000506

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Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000506| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000506, complete gene.| tag = P0406G0...")
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Gene Name

BGIOSGA000506

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000506, complete gene.

LocusTag

P0406G08.16

Ensembl Transcript ID

BGIOSGA000506-TA

Ensembl Protein ID

BGIOSGA000506-PA

Length

6064

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39653753..39659816

Sequence Coding Region

39659443..39659816,39659218..39659337,39653753..39654311

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39653753..39659816 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39653753..39659816 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGATGTGCTGCGAGCTCAGGCCACCGCGTCGGCGGAGGAGGTGGCCGGCGGCGTCTGGCCCTGCGAGCTCGACGACCACCTCATAGGCGAGCTCCTCGGTGACGACGGCCTGTTCGTCCCGGCCGCCGAACACCCCACCCTCTACTACTCGTTCGGCGCGGGGTCATCAGCAGCCGCCGCCGCCGCGCCGTGCAACGGGGGCGGCAGCGCTGATCACGAGCGGCGGCCGCGGCCGGCACCGGCGGTGAGCAGGGATCTGTGCTCGGTGTACTCAGGCCCGACGATCCGCGACATCGAGAAGGCGCTGTCGTCGTCGGCGTCGCCCCGGCCGCCGTACCCCTCCGGCCGCCGCTACAGCTCTCTGTATTTGGTGGAAGCGGAGAGCAAGTACACGAGCAAGGTGAGGAGCTGCGGCGGCAAGATGCCGGCCGACGGGTACAAGTGGAGGAAGTACGGGCAGAAGTCGATCAAGAACAACCCACATCCCAGGAGTTACTACAAGTGCACCAGCTCCCGATGCAGCGCCAAGAAGCACGTCGAGAAGTCCACCGATGACCCGGAGATGCTCATCGTCACGTACGAGGGGTCGCACCATCACGGCCCGCAGCCGCTCTTACCGCCGCACATCGCCCAGCCACCGCCGCCGACGTCGGTAGTGGGCTTCTCCGCCGCCTCCGGCGCTGGGCCGCCGCCGTCGTCGCCCGCGGCGGCGGCAAGGAAGAGGAAGAACTATGTCAGGGCGGCCTTCTCGCCGACGACGTCCGAGGACGACGGCGACGGCGCCGGCCGGCTACGGCCAGAGTGGCCACAAGACGATGGGACGTCGTGTGACGTCGCCGAGTTACGACGACGTGGCGACGCGGAGCACGCCGCGCCGCGTCGTGTCGCGACGGATCGCTCGTGCGACGATGGCGGCGGCGGCGGCTCGACCTCGGCCTCGTCGTCCGTGGCACGCGCTGACGCCGCTACGGCGCTGTCCTCTGACTCACCGCCGACCATATGGTCGTGCCTGGACTGGCCGTGGTCCCAGGAAACACTGTTTCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MGDVLRAQATASAEEVAGGVWPCELDDHLIGELLGDDGLFVPAAEHPTLYYSFGAGSSAAAAAAPCNGGGSADHERRPRPAPAVSRDLCSVYSGPTIRDIEKALSSSASPRPPYPSGRRYSSLYLVEAESKYTSKVRSCGGKMPADGYKWRKYGQKSIKNNPHPRSYYKCTSSRCSAKKHVEKSTDDPEMLIVTYEGSHHHGPQPLLPPHIAQPPPPTSVVGFSAASGAGPPPSSPAAAARKRKNYVRAAFSPTTSEDDGDGAGRLRPEWPQDDGTSCDVAELRRRGDAEHAAPRRVATDRSCDDGGGGGSTSASSSVARADAATALSSDSPPTIWSCLDWPWSQETLFL</aaseq>

Gene Sequence

<dnaseqindica>1..374#480..599#5506..6064#ATGGGAGATGTGCTGCGAGCTCAGGCCACCGCGTCGGCGGAGGAGGTGGCCGGCGGCGTCTGGCCCTGCGAGCTCGACGACCACCTCATAGGCGAGCTCCTCGGTGACGACGGCCTGTTCGTCCCGGCCGCCGAACACCCCACCCTCTACTACTCGTTCGGCGCGGGGTCATCAGCAGCCGCCGCCGCCGCGCCGTGCAACGGGGGCGGCAGCGCTGATCACGAGCGGCGGCCGCGGCCGGCACCGGCGGTGAGCAGGGATCTGTGCTCGGTGTACTCAGGCCCGACGATCCGCGACATCGAGAAGGCGCTGTCGTCGTCGGCGTCGCCCCGGCCGCCGTACCCCTCCGGCCGCCGCTACAGCTCTCTGTATTTGTAGGTGCATGCACAATTGTGCACACATGCATAGAGCTAAACTAACTCCAGTTCTTACCGGAGATTGATATTATGTTGTTGGTTTGCTTGGAAATTAAGCCGCAGGGTGGAAGCGGAGAGCAAGTACACGAGCAAGGTGAGGAGCTGCGGCGGCAAGATGCCGGCCGACGGGTACAAGTGGAGGAAGTACGGGCAGAAGTCGATCAAGAACAACCCACATCCCAGGTGCGCCACGCGCAGTATCATCGATCCAATCTAACTCTGCTCGCTTTATCATTCTCCTTCAATCCGAATTATTCTTCCACCAGCTCTACCCTTCTTTGACTGGCTTGCATTAGATTTTGCGACATAGGGACACATTTACACCGAGAGTAATAGCTGAATAGTGCTAAAGAGAGACACCTTTTTTTTTAAAAAAAAGCTAATAGTATACTCAATATCTATGTATTTTTTTTATTCTTAGAGAACTTTCTCTTAAATTACTCATCCGATTTATAATCCGATTACACCGTTGTGTTCGTAACAATAAAATCCGATTTAATCCGATTTAGAGAAGCTTTACAACAAGATCTCACATGATTATATTTTGATGAAAAATAACAAATTACTTTTATGATATGTCTAAATTATTTCTAGATTTCACTAAGTTACTTCTTAGACATATAAAAGTAAATTCAGTAAAGCTTAAAAGTAATTTACATATATTATAGAAGTAACTTACTGTTAACAGTGAAATTTGGTAAGCCCGGAGTAGTCATCGGCTTAGAGTCAGCATCGGCTTCGAAGTCATGAGATTAGTCGATGAGATTTGTCAAGTCGTCAATTGTCGGATTCTTGCTATATTCAGTTAAGAAAATTGAATTACAACAAAAAGAATAAAAGTAACTTTAATTTAGAACTATATCTAGATTCATTAACATCTATATGAATGTGGGTAATGCTAAAATGACTTACATTATAAAACGGGAGGAGTAACTCTCTGTAGTAGAAATTATTATATTGTGAGTGAGCTGAAATAAGAAACTATGTAAAGTAAATTCGCAAGTAAAGTGTAGAGAAGATTTATAAAGTCCACAAAATATAGAATTAACTAAAAACGATAATAAAAATAATCAACTTAGAGCATTATGAATGTATAGAAGTAATTTAGTCAAATTTACAAGTAACTTATATATATGATAAAAGTAACTTACGTATATAATAAAAGTAATTTATAAATATAAATATTTTTCATCGCAATATAATCATGTAAGATCTTGTTGTAAAGATTTAATTGCAATGAACGTAATGGTGTAATTAGATTGTAGATCGGATAAGTAATTTGAGAGAAAATTCTATAAAAAGAAAAAAAATAGACATGCATTATGTGCACTAGTAACAACTGGACCTTTTCTCACGTAGCTGTACTGGCAGCACAGGATCTTCTCTCACGTACTAGTAGCACTGGACATTCTCTTACGAATGAGTGCGTCGCCCTTAAACACTAAATCGAGAGCGCAATCAGTTTAGATTTTGCGATATGGATTGCACGGTTTTAGTGACAAGTTGACCATAGTGCACTGATTAAACTTACGCCCATGCTCAAAAGCGTTCAAAAATGGTTCTTAGTTAGGTTGTGAAAAAGAAAATTTAACCAATTAAGGGAGCGGAACGGGACGACGTGGTAAAGATGTACTGTAGCCGTACATACAGTTGTGACGAGTTGACGACGACAACGAAGATGTATTCTTAGTCCTGATAAGGCTGCGTTCTTTCCACAAGTTTCCCAACCCCTTTTCCTCGTTTTTCGTGTGCACGCTTTTCAAACTGCTAAATGATGTGTTTTTTTGCAAAAAGTTTCTATACGAAAGTTGTTTTAAAAAAACAAATTAATCCATTTTTGAAAAAAATTAACTAATACTTAATTAATCACACGCTAATGGACCGCTCCGTTTTCCGTGCGGTGGAGTTGGGTTCCCAACCCCAAGTATCAAACACAGCCTAAGAATGGCGCAATATGCGCGTGTCGACGTCGTTCATTTACACCGGATACGGCGCTAGCGCTGGGGGCAGCCGCTTGCAGCTGCACCGTACCATGGCGAAATCGAGAGAAAAACGCCGCCAGGAGCGCGCGCGGTCAAGCCTGTGCGTGCAATCCGTGCATGAACAATATGGCTAGCTGCGCGGCTCGCCGCCGCCTGCTATCGCCCACGGCGGCGCGCGTGTGTACGTGTCGTGTTTCCGCGAGTGGGACTTGGAAGGACTCGCGGGTATACGTATACACGTGTGCCAATCGTACAGTACAGATCGATTAGTGTCATACGGTGCAGAACAAGGGATTGACGAATTCCCTAGACGGGGAAGTCAACGCTTAGCCGTGCAACACTCTTACATTAAAAAAAGATGGTTAAATGGCTGGCTATATTCTTTTCATAATCACGTATATTACCCATTTTGAAATTTAATTCGTGATTCGTGCTCAGAAAACCGGAGTTTTTCTCCTCTAGCTCCGACGATACCTTCTTTACCAACTCTAGCAACCTCGATGAAGGTAGTGAAGTTAGGGTTTAGAGTTTTTGATTGTGGTAGGGTTGGGGGTTGGTAGGGGAGGGCAAAGAAGAGGGACATCGCCATGCTTAAAGAGATGTCGGAGGCAACGGCCCGACAGTGGGAGGTAGACACGAGTTGGAGGTAAGGCATCGGCGGCCACATCGAAGCCACGGAGATGGAGGAGGATGATGGGTTGGCCTTGACGGCGGGGGCAAACCAGAGCTTATGGTTAGGAGACAATGATTAGTGGTGACGGATCCAACGGCGAGGAGCTGTCGAAGACGGGGAAGACAACGAGACAGGGACACTTGCGCCGCCGACTTGGGAAGAGAGGTGGGAGGGGGAGAAGGCCCGGGATGAAGGGGGAGTTGCCGGCACAGTTGACTTCATTCGGCCAACCGGCAAGGCCGGGCTGTGGCACATGGGGCTGAGGCAGAGGCAGAGGCATCGCATGCATGCAAGCTTGCGAGTGGCAGCGGTTGCGCTGGGAATGACAATAGAAGAAAGGAGGGGTTAGGGTAGAAATATGGTGCACGAATCTTAATATGATCCAATGGTTTAGAATTTGCATGATTTGTAAGGTGTTTTTCCGTCAAATAGCATATAAACATTCTCAAAACAAAAGGATGATATACTATTTTTATTTATACTTTATCCATTTTTAAATAACGACATTTTCCTCCAATTCGTTTGTTTCAAAATATTTTTATCACCACCACACTTTTATTAGCAGAATTTCAATTTTGACCCTACTCTCCGTAGCTATACTTGTGAACATAAATCAATCTTCACCATAGAGCAAACTTCTAGGTGCTTCTATTTTGGATCCATTTCTTGCCCTCCACCTCCACTTTATCCATTCTTTAAAACCATCTCCAAATAACTACCAATGACAATTTGGTTATAAATTTTGTTACCATGATCTACGTGTTTTGGTGAAAATTTCTACAGTATGTTATTCGAAAACAGAGGGAGTACTCAATAATTACTACTACCTTTATTTGTAAATATAAATATTTCTAGGTTATTGGACAGATATTAAGGTAGACAAGAAAAGATAGAAATCCCACAATAAAAAAATGATGGATAGGTAGGGTGTATGGGTAGGTGGGAGTGAGAGATGTGAAGAAATTTGAACGGGAAATAATAATTTATAGTACAAGTAGTATGTACTCCCTAGAATAGTGTGCTAGATATTCTTATATTTTGAAACCAGATTCAAACGTTGAAAGTTTCTGTATTTTAAAACTGATGGAGTTTGTTTAGGAGACTCTTTAATTAGGTACCTACTGCACACTACGAGATCCTGCATGTAACTAACACAGATGTGATGAGTAGCATGTTGTGGTCTTAGCAGTTCATTCGCTTCGACCATTCAATTTTCTTACCTTTTCTAACGAAAGAAATTACTATCTACGTTTTCTAATATATGATGTCGTTAACTTTTTAGATATGTTTGACTATTTGTCGTATTCAAAAAAGTTTATACAATTATTATTTATTTTATTGTGACTTAATTTATCGTTAAATACTTTTTAAGAATGATTTTTTTTATATTTGTACAAAATTTTTAAATAAGACTATTGATTAAATATTTATTAAAAGTTAACGATGTCATATATTAAAAAATAGAGTTAAATATCCTTTGTCTTAAGGGGGAGTGGGGGGACACGGTCCTGATTGCCCTGTCTCTGTGGATGTGAATGATCTAGCATTTCAGTTGAGAAGTGAGGAGCCTTTAATTCACAACAACCATGATAGATTGATAGATCGTGTGTTCAGATTCCAGAGAAATTAAAGCTATATATATATATATATTATATCAGTAAGGGGGTGTTTAAATTCATGGGTGTAAAGTTTTAGCGTGTTACATCGGGTATTATATATGGGTTGGATGAGGTGTTTGGACACTAATAAAAAACTAATTTCAGAATCCGTCAGTAAATCGCGAGACAAATTTGTTGCCTAATTAATCTGTTATTAGCAAATGTTTCTTGTAACATCACATTGTCAAATCATGGAGCAATTAGTCTCAAAAAATTTCTCTTGTAAATTAGTCGCAATATGTGTAATTAGTTATTTTTTATGTATATTTAATATTTTACGTAGGTGTTAAAATGTTCAATGCGATACGATATAAAATTTTTGGTGAGAAATAAACAGGGCCCAACTAGTAGCACCACGTGGAGTTCTAGAGTCAATCGGTGTCACTGTGCACGCGGAGTTGAAAGCGCGCGCCGCAGGTAGGTTGTTCACTGGCGTAGTGGCACACCAGCGGAAGCAAGCGGCCGGAGACATTAATTCCAGATCATTTTCAGAGAAATACAGGATGGTGCGAAGACACGCATGCTTTCATATACATGCACATGCCATATATAGTCTGAATCACTGTGCTGTTGAATAATCTCCAAGTGCACGTCATCACCGAAAACGTAATTAATTACACGAACGCCGAACTGCAAGAATTAACATCCATCTGCATCGCATTAAAACGGCGGCTAATGAACACAACAGCGATGTTTTCAGATGAGCAGTCTTTTTCAGAGAAGCCGAAATTTGCAGGATCACGGCAATGGTAACATCATCTCCGGTGAAAATGCAGGAGTTACTACAAGTGCACCAGCTCCCGATGCAGCGCCAAGAAGCACGTCGAGAAGTCCACCGATGACCCGGAGATGCTCATCGTCACGTACGAGGGGTCGCACCATCACGGCCCGCAGCCGCTCTTACCGCCGCACATCGCCCAGCCACCGCCGCCGACGTCGGTAGTGGGCTTCTCCGCCGCCTCCGGCGCTGGGCCGCCGCCGTCGTCGCCCGCGGCGGCGGCAAGGAAGAGGAAGAACTATGTCAGGGCGGCCTTCTCGCCGACGACGTCCGAGGACGACGGCGACGGCGCCGGCCGGCTACGGCCAGAGTGGCCACAAGACGATGGGACGTCGTGTGACGTCGCCGAGTTACGACGACGTGGCGACGCGGAGCACGCCGCGCCGCGTCGTGTCGCGACGGATCGCTCGTGCGACGATGGCGGCGGCGGCGGCTCGACCTCGGCCTCGTCGTCCGTGGCACGCGCTGACGCCGCTACGGCGCTGTCCTCTGACTCACCGCCGACCATATGGTCGTGCCTGGACTGGCCGTGGTCCCAGGAAACACTGTTTCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000506