BGIOSGA000624

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000624| Description = cDNA clone:J023008B01, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA000624, complete gene.| ta...")
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Gene Name

BGIOSGA000624

Description

cDNA clone:J023008B01, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA000624, complete gene.

LocusTag

OS01G0808100

Ensembl Transcript ID

BGIOSGA000624-TA

Ensembl Protein ID

BGIOSGA000624-PA

Length

6043

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37690061..37696103

Sequence Coding Region

37695997..37696103,37694966..37695069,37694668..37694741,37694356..37694559,37693775..37693849
,37693633..37693692,37693246..37693323,37693105..37693156,37692483..37692754
,37690757..37691005,37690061..37690207

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37690061..37696103 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37690061..37696103 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATCGGCGGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATGGGGAAACTTGGTACCCTAGAAAACTTCCTACGGCAGGCTGATAATCTGCGGCTTCAGACTCTTCAGCAAATGCAGCGCATATTAACCACTCGCCAGTCAGCACGAGCTCTGCTTGCAATAAGTGACTACTTCTCCCGGCTTCGTGCCCTGAGTTCTCTTTGGCTCGCCCGTCCAAGGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MEGGRLGGAAASASAAAAAADARGGMSGFAAPQHAIHTNLNNVQPTQVTDFGALAQSAGFRIEDLANLSTNGLFNLKSNAHTIINDPLQFENYVKSISPSNITTTATVTVVDPQTLVPQKGAQLNLVTIRTGNVENWGESTIADTSPRTDTSTDPDTDERNQMFEQGQLAAPTASDSSDRSKDKLDHKTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQIEQELQRARQQGIFISTSSDQSHSASGNGALAFDMEYARWLEEHNKHINELRAAVNAHAGDNDLKSTVDSIMAHYNEIFKLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLAGIANLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVANYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE</aaseq>

Gene Sequence

<dnaseqindica>1..107#1035..1138#1363..1436#1545..1748#2255..2329#2412..2471#2781..2858#2948..2999#3350..3621#5099..5347#5897..6043#ATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATCGGCGGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATGTACGCACACCTGCCTCTCCATTTCTTGATGGTTTCTCTTCTCCCATTCTCCTGCTCATTTCTGCATGCTCTGTGCTGTGTCTTTACTTGTCTTAGCTTCTTTTTTTTTGTTATTTTTCTGAGTGAGTATGATCCCCTGATTGCTGATTAGTTTTGTTAATCGACCATGGATCGCGGATGATTGCTCATTCTGCTTTTCCAGGGAAAAAAAAGTTGACTGCTTTTTCAGCTGATTAGCTCTTGTCGATGAGTGGAGTGGTGCCCTTTAGCTCAAGTATTGTAATGATTAGAGAGTGGAGTAGCTTTAGTACTGCTCCTTAGTCTAGGTTTTTGGTTGCTGCTGTTCTTGTTCTTATTATGCTTGTGGAGTGCAAAGACCTTAAGTAGCCATGCGGCCCATCACTGATCACTGGACCACCTATGTACTATATATGTTCTGAACCAGGACACTGGATTAGCACCACTATGGTAGGCCCCAGATCTCCAAAAAGGGTAAACAGGATATGCTGATTGGGCTTGATCATGCATAGTTTGGGTTAGCTCATAATAGAGTGAAGCATGGACCAGGGAGTGTGACACATTGTGGTGGAAAATGGACTTTTGCTGAACTATGCCAGGTTTCTGTCATAATCTTCAAATTCTTAATCAACAGATGTTGAAGAACCCTTTTTTTTGTATTGCTCTGCAGTCTGAACAAATTTGGGTTCTTGACTGCTACTGCATGCAATGGGCATGCAAGTTTGCGACCAATGCAACTGAATGGTGTGCTGTTATTCTTGTATGGAAAAGAAATGATAGGTTGCACCATTGACTGTTGTTGAATGGACATTGTGTGATGCTCATAGGATGTATTTGATATGTAAGTTTTTGCTGTGTAGATACACTATTTTCTGTTCTGTAACTGATCTGGTGTACAAAACTTTTCAGCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAGTATGTTGGCAATCAAATATGCTAGAGAATTCCTTTTTTCCATATGTTGTTTTCTTGCTTTATAAATTTCAACTGTGTCATTTCTACTTTTCTGCAATGGAGTTTACACCATACATTGCACACAGCTACAATGCTGTACCATTAATGTCAATAAAAATCCCCTATACCTTTTCTGTCGACTGCCTGTGGCTTGAACACTTTTGCTTTATTTTTCTTATTTCCAGATGGTTTGTTCAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGGTATGCAGGCCATGAACGGATAATTCCTCATGACAGATCTGATGGTCTTTTATAAAGTAAAATTCCACCCACACCAGGAATTCATGCAGTTTTCCCTCCTGGTTGCAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGGTAATAAGACGCCTATCATTTTGAAATTACTGTTTATCATGATGATATGAATTTGTTTAAAACTGTTCATACCAGGTTTGGGATGTTTGAATTTTCTTTCAAATACCTTTGTAAAGAATTGCCTGAATTTGTGATAGGTACAGCCTTTATAATTCTACTATTATATGCATGTGGCGATTGATTTTTTATGTGTTAAGGACTGATGGTTCATAACTTCATATGTGCCATTGAGTTCAGATTAGCTGATGAAACAATTCAGTGTAGCACTACTTGTAGATTTTGCCTTCCCTAGACTAATCCTTGCATGCTGCCTATAACATTCTTGGAGCATGTGGAAGCTTTAGTATATGTACATTGATCCTCAATCATGTAAATAATTGAATTTTCCCATTAACACAACCACTTCAATTATTTTGTATTATTTTCACTTTATTTATGCTTTTTTGGGGTTAAATGCTAAATTTATACTCAATCATATCGATTTATTGGCTATATATACTTAACAGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGGTATGCGCTGTATCACCACATACAATATGCTTTGATCATACATGCAATCCACCATTCAAAGTAAAGGACTCTTTCTCAACAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGTGTGTTTGTAACTTTGTATGATCTTGAAATGTTTTATCTGATATTGTTGTTGAATTTGAACTTCTACTGAGCTACATATATATTTTCTTTCATCATCTCCTGTCTAACAAGCTACTTTCTTTAAGTAGTGTGTTACGGATTATTTTTACCCTGAAATTCCATTAGTAGCCTATAAACTTGTCCCAAACCATGATAGTATTTGCAATTGTAGATTAGATAAGCATTTTTTTTAAAAAAAAATTAGCCCTTTTTCTTCAGTTTGTGCTCTTTTGGATGCTTTGTATGGTTTCATCATTTATTTTCTGCAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGTAGAAGCTCAATATTTTTCTTGCAGGATTTATCAGAAGTTTCAAGAGATAAACATGTATTCGGTTTAATTGTCCAACATGTGCTTCAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGTAATAGTGTACTGACTTTTCTCTTTTTCTAAAATTGTTGGTTAATATAAGCAGTGCTGTCTGTTGTATTTTATCATGTGTCTTTTAATCATCATTTTTCTTCGGTATTACTTGGGATAAAGGAGACAAATAAAGAGAGAAGAAGATAGACACGAACATGACCAACTATGACTAGCTATCACGATACACTACTTTATACTTAAGAGTCTTGTGCAAGAAAAAAAAACTTCTTTAGGTATAATAATAAATTGTAGATATCATGGTAGCTAGTTTCAGTTGCTCATTGTTAAGTATCCAATATACTGCCAATGCCTTTTTATGGTAATGTACTGATGTTTTCTAATCTGTAGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGGTAAGAATATACTATTATTATATTGCGCCTACTTATTTTGAAGCCTCACCCGGAGGCAAAATGCTGACCTGAATATATATTATTTTAATTGATCCAATATTTTTCTTAGGCTCTGTTTTTTTTGAAAGGAATACTACCAGGCAATGGCCCAGTAGTGTATTTTATAGAAGCCAACAAAGTATTTACAGGGAAAAAAGAAAAAATACAAAAGGCTACAACCCCCTATAGAAGCTATAAAGTTTGTAACCAATCAGAAACCAATTGTCTAAGATCATCATTCATCCTACACATATGTAGAAGAATTTCATGCTTAAAAGAATTCCACCAGCTGTCAAATGAAGGATCTATATTCTGGAAAATCTTTCCATTCCTTTGCTTCCAAATGTGCCAACACGCAATGAAACAAATCTCCAAGAATCCTTTTTTCTGAAATCTCAATCTTGCTAGAACCAGCATCCTTTTTTCTGAAAGAATTCTAGAGAAGTGTTCCAAGATATTCCCAGCTTCTGCCAACATTTTCTACTAAAAGGGCATTTGAAAGAACAGGTGAGACAAAGTTTCTCTGTGATGCAAAGGGCATAAGACACAAGTAAGATCAGCATTTAGGGGGGCGTATTTTCTCCTGTCCAACATGTCTCTCGTGTTCAGCCTATCAGAGAAAAGAAGCCATATGAAAACTTTTATCTTCATCCCACATTTGGTCTTCCAGATCCATCGGAAAGGTCTGGGAGGTTGCATGGATGCAAAATTCAACTTGTAAAAAGCTTTTGAGGTGTAATTGTTCCTGCCCCATATAAAACTCCAATTATCCCCCTGCTGACTTGCTAAGGACAGAGCATCCAGCTCTCCCTTTAGCAGCAGAAATTCTGTGTAAGCTTCCTAGGTCAGTGGCAACTTAAAACAATCCTCAAAAGGTTTAGCACAGGTGACAGCCAAGGAATCATTTCTGGCAATGGCATGACCACATAGATGTGGGTAAGTGATGCTCCTAATTTGGTCATTCCACATGTCGTCCCAAAACAAAACTGTGTTACCTGAGATAACCTCACACTTTGCAATTCCCCTGAAGTAATCTGAAAGAGAATTTTTTAAGAGAATTCCCCTGAAGTAAACTGTGTTACCTGAGATAGCCTCAAAACTGTCTTAGGCTCTGTTTGGAATAAGAGAATTTTTCTCGCTCAATTTCTGTGTGAAATGAACTATTTCTTGTGAAATTTGTTGCACTCGAAACAGGTCCTTTTTGTCTTTGTGATTAAATAATTGCCTTCATGACTTTTGACCGACTTGAAAGCTAGAAAAGCTCACGATCTACATTTCTAATTAGATATTATACTGTTTTGCTTTGCTTTCCTTTTTCTTTTATAAAAAAATAGTCTTTTGTGGAATTCACCAATCTAGTTATCCCTATCCACACAGTTCGTAACGAATTCAAGATGACTGACATCTAGTTCCTTTTATACCAACATTTCTGCTGCAGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATGGGGAAACTTGGTACCCTAGAAAACTTCCTACGGCAGGTAACTTGTATTTGCTTACCTCCTATTTTATAACCTGGTTTGTTTGTTCAATATTGTTCGAGTTGGTTTGTGCAATCTATTTGGCTCATGCATTGTACTTGGACAACTAACGTGGCACCTTTTCTGTACTCAATAGACTGCTCTAGCTGGTGCTAATGCACATAATTAAATGGGTTAATTAGATCCATGCCTTTGCAAATATGGGTTAAAAGTGAGATTGCAACCTCTTTCTCTCATCACTAATTATATTGGCTCATTGTCTAAAAATTAATTAATTATTCCCTCTGTCCCAGAACATGATCATTTTCAGCCCCTCCCATTTGTCCCAAAACAAGTTTATTTTTAAGCAATCATTGCATTGAAATTTGTCAAAGTAGGGGATAAATACATTGGGAATAGATAAAAAGATAAATAGACATGTTTCTGTGTTGACTAATACAGAAGGAAAAATAACCATTAAACGGAATACCAAGAAATAGACATAGAGAAATGTATATTTCTGTTGCAAATTGTAACTTTTGGTGAACTATAACGATGCCTTATCTGCAGGCTGATAATCTGCGGCTTCAGACTCTTCAGCAAATGCAGCGCATATTAACCACTCGCCAGTCAGCACGAGCTCTGCTTGCAATAAGTGACTACTTCTCCCGGCTTCGTGCCCTGAGTTCTCTTTGGCTCGCCCGTCCAAGGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000624

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000624&oldid=38348"