BGIOSGA000792

From RiceWiki
Revision as of 10:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000792| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000792, complete gene.| tag = OsI_038...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000792

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000792, complete gene.

LocusTag

OsI_03803

Ensembl Transcript ID

BGIOSGA000792-TA

Ensembl Protein ID

BGIOSGA000792-PA

Length

4090

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35107085..35111174

Sequence Coding Region

35111007..35111174,35110156..35110305,35109984..35110074,35109373..35109527,35108290..35109288
,35107696..35108082,35107085..35107381

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35107085..35111174 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35107085..35111174 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCAATGCGGCGGACAAGGGGACGTCCATCGACGCGCAGCTGCGGATCCTGGCGCCTAAGAAGCTCTCGGAGGACGACAAGCTTGTGGAGTACGACGCGCTGCTCCTCGATCGCTTCCTCGACATCCTCCAGGATCTGCATGGGGAGGACATCAGGGAGACGTTAATTAATTGTGAAATTATGGTTTTAATATTGATGTGGACTACAGGAAATCCAAGAGTCACACCAGAGGTTACAAGGGACGTATGCCTGTTAGCTAGAATGATGGCTGCTAACTTATACTATGCACAGATAGAGGATCTGATGTTTGAGCTATCTATGTGGCGCTGTAGTGATGAACTACGTGTAAAAGCTGATCAGTTACACCGTTGCACAAAGAAAAACACAACAAAGCACTATATAGAGTTCTGGAAACAAGTTCCTCCGAGTGAACCCTATCGTGTAATACTGAGCAATGTCAGAGATAAGTTGTACAATACACGCGAGCGAGCACGCCATTTATTAGCCAGTGGATTTTCTGAAATTCCTGACGAAGCAACATTCACTGATGTTGAGCAGTTCTTGGAGCCTCTTGAGCTCTGTTACAGGTCTCTCTGTGCCTGTGGTGATAATTCTATTGCAGATGGCAGTCTTCTTGACTTTCTACGGCAAGTGTCCACATTTGGACTATCCCTTGTTAGACTTGATATTAGGCAAGAATCTGACCGACATACTGATGTTATGGATGCCATAACTCAATACCTTGGAATTGGATCCTATCGTGAATGGTCAGAGGAGAAACGCCAAGAATGGCTTCTGTCAGAACTCAATGGAAAGAGGCCATTATTTGGTCCTGACCTTCCCCAGACGGATGAAATTGCTGATGCCCTAGATACTTTTCATGTGATAGCAGAACTACCCTATGATAGCTTTGGTGCATATGTAATATCCATGGCAACAGCTCCTTCAGATGTTCTAGCAGTTGAGCTTCTGCAACGTGAATGTCATGTGAAGAAGCCACTGAGAGTTGTGCCATTGTTTGAAAAACTAGCAGATCTGGAAGCAGCACCAGCAGCTCTTGCCCGACTTTTCTCTGTTGACTGGTACAGAAATAGGATCGACGGAAAGCAGGAAGTAATGATTGGGTATTCAGATTCTGGAAAAGATGCTGGCCGTTTCTCTGCAGCTTGGGAACTGTATAAAGCTCAAGAGGAGCTTATTAAAGTTGCTAAGCAGTTTGGGGTTAAGTTGACTATGTTTCATGGGCGAGGTGGAACTGTTGGAAGAGGTGGGGGTCCTACACACCTTGCTATACTGTCACAACCTCCAGATACCATTCATGGATCACTTCGTGTGACTGTTCAAGGTGAAGTCATTGAGCAATCTTTTGGAGAGGAGCATTTGTGTTTTAGGACACTTCAACGTTTTACATCTGCTACTCTTGAGCATGGTATGCATCCACCAATTTCACCAAAGCCAGAATGGCGTGCTTTGATGGATGAAATGGCCGCTGTTGCTACAAAAGAATACCGGTCCATTGTCTTCCAAGAGGCACGATTTGTTGAATATTTCCGCCTTGCAACACCAGAGTTGGAATATGGTAGGATGAATATTGGAAGTAGGCCATCAAAACGAAAGCCTAGTGGAGGCATTGAATCACTTCGTGCAATTCCTTGGATCTTTGCTTGGACACAAACTCGATTCCACCTACCAGTGTGGCTTGGTTTTGGCGCAGCGTTCAAGCATGTCTTGCAGAAGGACATACGCAATCTTCAGATCCTTCAGGAGATGTACAACGAATGGCCATTTTTCAGGGTAACAATAGACTTGGTTGAGATGGTGTTTGCTAAGGGTGATCCTGGTATAGCAGCTCTGTATGACAAGTTGCTAGTTTCTGAGGATTTGTGGCCATTTGGTGCTCGTCTTAGAGCAAACTATGAAGAAACAAAGCAACTTCTTCTACAGGTTGCTGGACACAAAGACCTTCTGGAGGGAGATCCTTACTTGAGGCAGAGATTGCGTATCCGTGATTCCTACATCACAGCGCTGAATGTTTGCCAAGCTTGCACGCTAAAGCGTATCAGGGACCCTGGCTTCCATGTAAGCCCCCGAGCTCACCTCTCCAAGGACATAATGGACTCAGGGAAGCCAGCCGCTGAGCTTGTGAAGCTGAACACAACAAGCGAGTACGGCCCAGGCCTCGAGGACACTCTCATCCTGACCATGAAGGGCATCGCTGCTGGTATGCAGAACACTGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MARNAADKGTSIDAQLRILAPKKLSEDDKLVEYDALLLDRFLDILQDLHGEDIRETLINCEIMVLILMWTTGNPRVTPEVTRDVCLLARMMAANLYYAQIEDLMFELSMWRCSDELRVKADQLHRCTKKNTTKHYIEFWKQVPPSEPYRVILSNVRDKLYNTRERARHLLASGFSEIPDEATFTDVEQFLEPLELCYRSLCACGDNSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITQYLGIGSYREWSEEKRQEWLLSELNGKRPLFGPDLPQTDEIADALDTFHVIAELPYDSFGAYVISMATAPSDVLAVELLQRECHVKKPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRIDGKQEVMIGYSDSGKDAGRFSAAWELYKAQEELIKVAKQFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTSATLEHGMHPPISPKPEWRALMDEMAAVATKEYRSIVFQEARFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVLQKDIRNLQILQEMYNEWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEDLWPFGARLRANYEETKQLLLQVAGHKDLLEGDPYLRQRLRIRDSYITALNVCQACTLKRIRDPGFHVSPRAHLSKDIMDSGKPAAELVKLNTTSEYGPGLEDTLILTMKGIAAGMQNTG</aaseq>

Gene Sequence

<dnaseqindica>1..168#870..1019#1101..1191#1648..1802#1887..2885#3093..3479#3794..4090#ATGGCGCGCAATGCGGCGGACAAGGGGACGTCCATCGACGCGCAGCTGCGGATCCTGGCGCCTAAGAAGCTCTCGGAGGACGACAAGCTTGTGGAGTACGACGCGCTGCTCCTCGATCGCTTCCTCGACATCCTCCAGGATCTGCATGGGGAGGACATCAGGGAGACGGTAAATGATCCCCCGATCGCTCCATGCCATAATGCATTTTGGTTTCTCCTTATTTTTCTCTTGTTGATCTGGGTGGGGTGAGTACTGCATGCTCGAAGATCGCTTTGTGCGCAAATCGGAGGTGGTTTGGCCACTTATCTTAAGGCATTTTGGATTTGTGTGTTTCACTGATTTTATTCTCTGCATGTTATATTATTTGCATGTTTTATGCGCTTTGGTAGTGGAAATGTTATTTTTTTAAAAAAAAACATAGTGTCAAATCCTTTCTTCTGTTGTCATCTCCGTTTTCCTGGAATTGTACTCTCGTATGCAACTCATGTTTTAGCCAGGGAGTAGATTGCCATGCTGTTCAAAGTAGTAGCTATGCAAAGATGGGCGGATCGCTTGCTGTCATTGCGACTTTCCGATGGTCCAGTGGAATTACGCCCCTTTATTTGAGGAATGGAGTCTTGTTATAACCTTTTGTTATTGTTGATATGTTGCAGTCTGTGAACAAATGTGTCACGATTTGTTAATGGTCTCTAGTTTTCCATACTTCTACCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAACGAGCGAGTGCCCTATAATGCTCCTCTTATTCAATTTTCTTCTTGGATGGGTGGAGACCGTGATGGTATGTTACATCTATCATATCATGTTTGCAACATAGTTAATTAATTGTGAAATTATGGTTTTAATATTGATGTGGACTACAGGAAATCCAAGAGTCACACCAGAGGTTACAAGGGACGTATGCCTGTTAGCTAGAATGATGGCTGCTAACTTATACTATGCACAGATAGAGGATCTGATGTTTGAGGTAAAAATAATAGGTTGTACTATTTAAAGGATATATGCTGTATTGATGTTTAATCTCACACAAAATTTTGACCACCTGCAGCTATCTATGTGGCGCTGTAGTGATGAACTACGTGTAAAAGCTGATCAGTTACACCGTTGCACAAAGAAAAACACAACAAAGCACTATATAGGTATGTATCACGTATGGAATCATTACAGTTTAGTTCTGCACACCTTATTTCTATTATAAGTGGCCTTATTTATCATCCCCTTCCAAATAGGTTTACCAAATTAGTCTTCACCCCATAATTAATATAATTATTACGTATGTTACCGATAATCATCATGAGGATTCTCGAAGGATTAAACTTTAATGAAAATTCATCATCTAAATCATTTAATAATAAGAAAAACATAAAAGGATAAGTCCCACATGATTACCGTGGCAGTTTCTTGCCTCTTTTTTTTTTCATTTCTTTCATGTGGTTAATTTTTGGAGTCCTACATGTGAACTTTAGAACATACCACTAGCATTGGTCCCAAATTGTTCCACGTTAGCTTTACTGTGTTTTTTCCTTTCCTTTTTTTACAACTGTGATATATTAGGTGGAGTGAAATGCATGCTGATATGCTTCTCTTGAATGCAGAGTTCTGGAAACAAGTTCCTCCGAGTGAACCCTATCGTGTAATACTGAGCAATGTCAGAGATAAGTTGTACAATACACGCGAGCGAGCACGCCATTTATTAGCCAGTGGATTTTCTGAAATTCCTGACGAAGCAACATTCACTGATGTTGAGCAGGTACATAGGCTAAGATACAAAAAACTTGCTTACTATGCTATACGTTTTGGTTGTCCTTCTGGTTGAAGGTTTCTTCTTTTGCAGTTCTTGGAGCCTCTTGAGCTCTGTTACAGGTCTCTCTGTGCCTGTGGTGATAATTCTATTGCAGATGGCAGTCTTCTTGACTTTCTACGGCAAGTGTCCACATTTGGACTATCCCTTGTTAGACTTGATATTAGGCAAGAATCTGACCGACATACTGATGTTATGGATGCCATAACTCAATACCTTGGAATTGGATCCTATCGTGAATGGTCAGAGGAGAAACGCCAAGAATGGCTTCTGTCAGAACTCAATGGAAAGAGGCCATTATTTGGTCCTGACCTTCCCCAGACGGATGAAATTGCTGATGCCCTAGATACTTTTCATGTGATAGCAGAACTACCCTATGATAGCTTTGGTGCATATGTAATATCCATGGCAACAGCTCCTTCAGATGTTCTAGCAGTTGAGCTTCTGCAACGTGAATGTCATGTGAAGAAGCCACTGAGAGTTGTGCCATTGTTTGAAAAACTAGCAGATCTGGAAGCAGCACCAGCAGCTCTTGCCCGACTTTTCTCTGTTGACTGGTACAGAAATAGGATCGACGGAAAGCAGGAAGTAATGATTGGGTATTCAGATTCTGGAAAAGATGCTGGCCGTTTCTCTGCAGCTTGGGAACTGTATAAAGCTCAAGAGGAGCTTATTAAAGTTGCTAAGCAGTTTGGGGTTAAGTTGACTATGTTTCATGGGCGAGGTGGAACTGTTGGAAGAGGTGGGGGTCCTACACACCTTGCTATACTGTCACAACCTCCAGATACCATTCATGGATCACTTCGTGTGACTGTTCAAGGTGAAGTCATTGAGCAATCTTTTGGAGAGGAGCATTTGTGTTTTAGGACACTTCAACGTTTTACATCTGCTACTCTTGAGCATGGTATGCATCCACCAATTTCACCAAAGCCAGAATGGCGTGCTTTGATGGATGAAATGGCCGCTGTTGCTACAAAAGAATACCGGTCCATTGTCTTCCAAGAGGCACGATTTGTTGAATATTTCCGCCTTGTAAGTATTCTTTTTTTAATAACTTCAGTTTTTGTTTTATGCTTATAAAAATACTGTTCATTTTAAACCTTTTATGCTGTCTTGAAATAGCTATCTTGAAATTGCAACTTCACTCTGTAGTCACCCTCATAAATTTGTTATTTTGCTAATGATTATTCTAATGGTCTGTATAAATAATCTCAATTTTGCTTCTTTGCTGTCAAATAGGCAACACCAGAGTTGGAATATGGTAGGATGAATATTGGAAGTAGGCCATCAAAACGAAAGCCTAGTGGAGGCATTGAATCACTTCGTGCAATTCCTTGGATCTTTGCTTGGACACAAACTCGATTCCACCTACCAGTGTGGCTTGGTTTTGGCGCAGCGTTCAAGCATGTCTTGCAGAAGGACATACGCAATCTTCAGATCCTTCAGGAGATGTACAACGAATGGCCATTTTTCAGGGTAACAATAGACTTGGTTGAGATGGTGTTTGCTAAGGGTGATCCTGGTATAGCAGCTCTGTATGACAAGTTGCTAGTTTCTGAGGATTTGTGGCCATTTGGTGCTCGTCTTAGAGCAAACTATGAAGAAACAAAGCAACTTCTTCTACAGGTGATTTTCTAAGACGTTTTATCCATTTATATACCGCTAGATAGTATAATTGCCTCCAATTGCTGGTGTTTTTGCTGGCAACTGGTTGGTAATGTTTTCCTTCAATTTACCAAGCTGTATATCCTGCATTTGTCTGACTAAATGATCAAGCATCTTTTATATATTGGCAATAATTAAGCTCCAGATACTTCTAGAAAATGCTGCACAGAAATGTATCTCCAAATTAGTGTCTAAAAAACATATTTATCACTAGTCCCGAACTACTGATCTTTTTTTTTAACTATATCTGCCCACTCACTGCTATGTGAACTCAGGTTGCTGGACACAAAGACCTTCTGGAGGGAGATCCTTACTTGAGGCAGAGATTGCGTATCCGTGATTCCTACATCACAGCGCTGAATGTTTGCCAAGCTTGCACGCTAAAGCGTATCAGGGACCCTGGCTTCCATGTAAGCCCCCGAGCTCACCTCTCCAAGGACATAATGGACTCAGGGAAGCCAGCCGCTGAGCTTGTGAAGCTGAACACAACAAGCGAGTACGGCCCAGGCCTCGAGGACACTCTCATCCTGACCATGAAGGGCATCGCTGCTGGTATGCAGAACACTGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000792