BGIOSGA001004

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Revision as of 10:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001004| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001004, complete gene.| tag = P0519D0...")
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Gene Name

BGIOSGA001004

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001004, complete gene.

LocusTag

P0519D04.24

Ensembl Transcript ID

BGIOSGA001004-TA

Ensembl Protein ID

BGIOSGA001004-PA

Length

3321

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31651653..31654973

Sequence Coding Region

31654924..31654973,31654079..31654211,31653350..31653453,31653051..31653222,31652782..31652922
,31651653..31652012

Genome Context

<gbrowseImage1> name=IndicaChromosome01:31651653..31654973 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:31651653..31654973 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATGCCCCTTAGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCTGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MSSLNSLFNRSTFGTKCKTCLNLVISRIKLLRNRRELQLINMRKEMVQYLQTGQESIARIRVEHIIREQNILAAYEIVELFCEFVLARVPIVEVQKECPLELREAIASIIFASGRCSDLPELMHLRTLFTTKYGKEFVAAAMELRPDSGVNRTIIEKLSVKAPSAESKLKVLKAIAQEYGLEWDSSNTEAELNKKYEDLLDGSGSSARQGQLPIIENSPVASISRDMPSLSISPVEDTGKYQAAPQSPSSPAGSAVMHAATKSNMVSQEHHRSPADEISCATPSSSDVLEKARAAIAAANRASAAARAAADLVKVKITS</aaseq>

Gene Sequence

<dnaseqindica>1..50#763..895#1521..1624#1752..1923#2052..2192#2962..3321#ATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGGTTCGCCTCCTGGCCTTCTCCCTCCTCCCAGATCCAACTACTATCCCCTCCTCTGCTGCAATTTGTCTCTCGGATTGGGTCCGTGTTGCTAAGATCGGCGACTTTCATGCTCGTGCTTGTGCTTAGCAAGGAGTTCTAGATTTAGGTTCCGTTCCGCAGGTATCGACAGGTAGTTTTCTATGGAGACAGAAGAATAACATAAACTTAGCTTCCGTCTGGATCCGAGTGAGTAGATAGATAGAGAGCAGCCGTCTTCACCTCCTCCTGTAATGAATTGCCTTCGCTGAATGCTTCTGTTCATTATTTCCTTAAAGGGTGTGCCAAATTCGCGTATATTGCTTTTTTTTTTTTGGATCTTAGGCTATTCCACAGACACACACAGTCAATGTTTTGATGATTGCTAGCTTCATTTTTTTTTCAGAACTCTGACTGTAAGTGGCACCGTAATTGGATTAAACCAGCAGAACTCAACTAGTATAAATACCAGTATGCACTGGCGTTATCAGATCAAAGGAAGTCGATGAGTTCATTAAAATTACTGTATTAGAGTTAGTGAGATCCAGTTACTAGTAATTGCTTACCCACGGCCACAACTACTTTATGTTTCATGTCGTTCATACAGTGAATAATTGCATTGCCTATGCATACATAGATAAACAGTGTGGCTTTATTTTGTAACCTCAATTAACAGAGGTTTCGTGCATTCTTTTAGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTAAATTTACTGCTATTTATGAGCTACTCCCTCCATTCCAAAATATAAGGCACAACCACCCTTAACCCAAAGACCAAGAAATAATTATTATCATCTTGTAGTTTGGATCATCCTAATAAATATAATGCATGCATCCAATAGGATTAAACAACATGTGAGTGGAGAATTTAAAATAGTAATAATTTAATGGAGAAGATATCATAGTTAATTGCATGCTTGCATGCATGCCTTATACTCCCTCCATTCCAAAATATAGGGCACAACTACTTTTTAAAGGTGTTTCATAATATAAGGCGTGCATGCATGCATGGCAATTAATTACCATCTCTTCTCTCCTAAATTATTATTTTTTAAATCATACACTCAAAAGATGTTTAATTCTATTGGGTGCATGTATTGTATTAATTGGATTGATTCAAACAAAGAGGTGATAATAATTGTTTCTTGGTCTTTGGATCAAGGGTGGTTATGCCTTATATTTTGGAATGCAGGGAGTATTATGGAACATCTAAGAAAAATGGTTGTGCCTTATATTGTGGAATGGAGGGAGTAATAAATATGCACAAAGAGATGGTTCCATTTCTATTTTTTCTTCATTTCTCTAAACTATCATTTTTATTCATAGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGTAGGTCCAGTTTTATCAAGTGTCTTCTCATTAAGTTACTGTTTTGCCATCATGCATATATCATGATTATTTGTTTCTCTCACTTAATACAGTATCATAACAGTTTACTGGCTTTATCATGGAACAGGGAATGCCCCTTAGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAGTAAGAAGAAGCACCAACATCTGTTCTTTTCAGAAAACTAATTTGTGTTTTTGCTTGCAAGTTGAGCATCTTGTATTCTTGTGTCAATTTTAGAAAAAGAGGAATAAAATTGTCCATCTTGTATGCAGATAATCGAGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTGGTAACATTTGCTAAGTTATTGTTTTTCCTAATTATCAGAACCAAATGGTATTTTTGCATGTGACAGCTTAAAAATCAATTGTTTGCAAATTGTACTAGCATAGCTAAAGCCTGAAAGACTAAATGCTCATATGCAATTTTGTGGAATTAATGTAAAGGAACACTACTGTTTTAGGACACCCTTCTCACTTATGTTTTGTTCAGACTAGTTTGGTCTTGGTCTGGTTAATACTGAGAATACATAAATGTATTTTTACATGTTAATCTAATCAACACGAAGCACCCTTTTTTCGTCTAACTTTTGGCTAGTAAATCTAGGGCTGTCAACTGCATACTTGATTAGTTCTGTTCATGATTTTTGTAGTCTGTACGATTGGGGCACCATGTCGTGTGCCTAGGTTCTGTTTGTAGATTATTCCCCTCCGATCTCATTCTTGGTTCCAGCTCTGTCTTCCATCCTTATCTCTTGTTCCCAATCTCCCGTGACTATATGCGGTAGAAGGGTGGGACTCACATATCAGTGACTGTAATGGTAGTGACATTATGGTAGAGGATCCTCACCCCGAGTGTACAGGTTGATTCGGACTCTTACATTGTGGGTTACAAACGTGATGTTTTAGCTGATGTTTTAGCGCTAGAAATTTACAGGAACGAGCAGAAACAGCTTATTTCAAACCTCTCTAGCTCTATCTAAAATCTAAATGTTCACTTTTGCGTTCGACCATAAAGACACTGGACATTCACTTCATTTGTTCTGTACTTGTTTACAGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCTGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001004