BGIOSGA001038

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Revision as of 10:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001038| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001038, complete gene.| tag = P0007F0...")
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Gene Name

BGIOSGA001038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001038, complete gene.

LocusTag

P0007F06.31-1

Ensembl Transcript ID

BGIOSGA001038-TA

Ensembl Protein ID

BGIOSGA001038-PA

Length

6238

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30928662..30934899

Sequence Coding Region

30934855..30934899,30934519..30934713,30934363..30934409,30933661..30933726,30933456..30933563
,30932570..30932636,30931868..30931952,30930753..30930913,30930239..30930340
,30929342..30929564,30928662..30928795

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30928662..30934899 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30928662..30934899 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MTGADEPSITRWTFEDFEVYYEVRLGIRREPGGDEDGDGDGGGGRGYAPLGSGSAGSTRPSAAHANGGADLAVFEQFERLERKVELRNGAIEAGPPQKSLLPSFESAEMRNLAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEQEARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSVLEGRQEEVPEDELPEVGPVTTEDIELALRNTRPSAHLHVHRYEKFNQDYGSHVLS</aaseq>

Gene Sequence

<dnaseqindica>1..45#187..381#491..537#1174..1239#1337..1444#2264..2330#2948..3032#3987..4147#4560..4661#5336..5558#6105..6238#ATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGTGACCTGACTCCGCACCACTCTCTCCCTTTGGCTTTCTGTTTGATTCGATTCCTCTCCTCTCCTCCCCGCTGTCCTGTTCCCTTTTTCACCCTTCGTCGCTGTCGCGCGTGCTGAGATCGTGTCCGTTTCGCGTGCGCAGGACTTCGAGGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTGGTGCGTCCGCCCTTCTCTCTCTATATCCCCCCTCTGCTCTGGATGATAAGTTGTTACTGCTTCAGGGATGATTTTGTGATTTTTTTTGCCTTCTCTGTTTTGGTGCCAGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGTAAGACTCGTTGCTTTCTATGGAGTATAGTACATCCAGTTTGACTGCATTTTTTCTATCTGAATTGTGAAAACTTCCTCTGAAGTTATTTGGTTTTTGTCTGGTGTAAAATTGTTAGCTCCTTCGTTGGCGGGATGAAATTTAATTGTGACCAAAGTGGTTGATCCGATCCTGATTTGGGCATTAGCTAATATGGGATCAAAACCATGCATTGTATTTCAGTTGTCCAAACCTTAGAAATAGCAACCTTATGATGATTTTGTTGCTATAGTTGTCTGCATGCATGCATTTTAAGCAGTTTTATGTCTGGCATATACTATGGAAAATAGTATTTGCTATAAGTATCTCAAATGTAAACATTAGTTTTTTCATTTTTAGTGATGCTATTAGTTTATAGTACAACAAAATTGCTGGAACTTATCGCTTTAATGTCAATTAGATATCTGGTTATTCCTAACAGTACCTACTATATTCAAAGGAAGTTTCCAGCTATATTTTCCCCTGTTCAACCATTAATTCTGAAGTATTATTGTATTGTCCAGTCACACAATAAAACTCCCCAGCCCATTCCTTTCTTTCACCTATCATGTATATTACACATGTATCTTTGTGATAACTGACTTAAGATCTTTGCAGGCAGAAATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGTAACACTGCCTTTTGGTAAATGTGGCCAGACTTATCTATTTGGTACTGTAATGTATACAGACTTATAACCATACCTTCTTGGTGTAATTCCAATAGGGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTAGGTTTCTGTCTTCTCACAGAAATAATATATATGATATATGCTCACAACATAGGCCGTGTTTAGTTCCTTTTCAAATTTTTTTTTGAAGTATACGGACACACATTTGAAGTATTAAACGTAGACTAATTACAAAACAAATTACAGATTCTGCCTGTAAACTGCGAGACGAATCTATTAAGCCTAACTCTTTTCTGCTTATAGAATCTCAAAATTCTTGATATGACCTGCAATACCAAGAAGATGTGTCTCTTCCTAACTTCCTTTCATCAACGTATAGCATAGGCAGACGAACTATCTAAACACTTTTGAACAAGTAACTTTGTCGTTTAACATGTCTGGAAAATATTTTCATACCTGACATTCGTGGCTCAAAAGAATGTTGCATTCTTGCATCGAAATTTGTGATTGGTGATGCTTCGCATATCTGCATGGTCATGTTTGCATATTTAAAAGGTCAGATCAGATCTCCCTAAGATTGCATTTAAGCAACCACTGTTATTCATGATAATATGTCGCATACCATTTACTTTAACTCTTTCAGTTTGATGATACAATGCCCCATGTGTGTGTTTTTGGTATCTTCTGAAGAAAGTTTTTTGTTAGATGTAGAATCTTTACCAGTCAGGCAATTATTTATCTAACCTGTATATTCGTTTTGCTAGTTGTTACACCGCATGCTTTCTATTTCGTTTTTTGCTAATTAGATTCAGGAAAAAACTCCCAAATTAGCTTATCTGATGGCTTCTATAACTTGTGTTAGAAATCAGTATTTTGGACCTACCATTGGTTCTCAATTATTTTCTTTTTGAACTGTAGGTACTTCAAAGGTCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGGTTTGCACCTTACAAAGATCATTGCATTTTAGTTGTATAGTGTATATGCTAAGACTATATTGTTATCTTTGTACTATTTAGATGCTTAGCAAGGAACTTTTCTTGTATATTGTAAGATTATTTTTTTGGCATAACAATGAATCTATGTTCTCCCTGTCCTAAAATATGTTACATTTCATCATGGACTATAGTGGTTGAATTATTTGGTGAAGTATCTTTGTTTTATATTATTGCTGCCTTGTATTAAAAAAAACATCAATCGCCATTTGAAATACTCTACTGGGATTCACCTCAGCATTTGTCTGTTAAAGATAGTAGATTTACCTCAGCATTTATCTGTCAAAGATCATAGATAATTAAATTATTTTACACATATAACTATATAGTTAGCACCTACAATAAGCTGTGGCTGGTCTGTTATGTTTTCCCTTGCTTCTTTTGTCTTTTGTGCTACAGAACGTTCCACTAGTCTATTGCATTTGTTTATGTACTTGTTTGCATACATTTCCCTTCATATCAACTCCGTTTCCATTCCATATGTTGCTTGTCGTGCTATACGAACTCAAATTGCTGATCATGTATGCTTGATGTAACTGTTTTGATATATTTTGTTTCAGACAATGCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTCAGTAAATGGCGTGGTATGGCATTACTTTTGCTTGCGTTCTGAGATGCATTTGCATTGTTTCCCTTTTAATGCTATTGTTGTTGTAGTTTCTACTTCTTGTCATGTTGTATTGCTTGTATGACCAACTAATCATGTAGATATGTGATACATGCATGCACTATTTTTTTGTGTTTCTATCTGCTCTTTATATATTTTTTAAAGCAATCCGTATTAGCAAATTTCTATAGATTTACATTGGATAGTATTTACTCTTCCAAGTTTTATAAAGTTAATACATGTTTCTCCAGCACTAAAGAGGTCCACAGTTAACTATTCATTGATACTACTCAACTGTATCCTTAAACTCACTTAAGCGCCACCAATAGGACTGAAACATTCATAATTCTTTTTTTTTTCATTTCCTTCTTTCTATATTCCCCTAACAGGCAGTTATCTTTTGGCCTCATGTACTAGCAGCTTGAAAGATATCAATAATCACTGTTGTGCATGACAGTATTCTATGAATCCTAGCATATGCCACATTTCTTTTGGACTTAATGAAACCATCAAATCTTCTCCTTCACCCTTGCATACCATGTTATGGCACCCAATGGTGTAGGGCTTCCATAGCCATTGTTGGCCACTGCCCACTGACCACTGGCTCCCTATTTGCACCAGAGCCTACTAGCCTAATACTCCTCTGCCACCCTCACTCCGCCTGTACATTTTGTGGAACATTGTATATCCAACAGCACTAACCTTTGTGGAACAATCACCTCATCCTTTTCATTCATCAATTTGGAAGAACAGATATGTGGAACTATATAATTCCTTCTTGCTATTAATAACGGATGGATGAACCTGTACCTGACTAGATCGAACTTATAACTTCTAACTCACATCCTTACCATACATGATATTCTGTCCTTGCTCCATTTCTATCGATATTTTAGTAAGTTTTCCCTACCTAATAGTTACAACGGTGCAGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGGTAGCATTCTTGAGGCTTTGTAAAGTGATTATGCTGAAACTTTCACTGCTTCATAAGTAGTATGAGTTTCTCAGCCCTAAATTGTGAACATAACCCTATGGAGGAAAATTAACAAAGAACAAACTCTTTAGATATCATATATCTCAGCATATGGGATTCTGTTAAAAAGGACGCGAATATTAGGGAAGGATCTAATATCAAATAACTAGAAGGGGTGAGGCTTCGAACCCAGGTCGTCTAGCCCACCATCTTGTGGAGCTAGCCGGAAGACCCTTGGTGGTTCTCAACATACAGGATTCTGTTAGTATATGAAACCTTTCATAAATTGATATGTATAATAATCCTGAACTTGTGTGATTTCATTCACATGGTGATAAAAGCAGTCATGAATTCTGATAATTTGTTGCTGCAGATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTGTATCCTTTTTTCTCAAACCATCTTGTAATTTCTTTGTTCACGAGTGCTCCTAAATACTACTCCGTAATTGCCAGTTTTGCTATTAGGTAAACTCCCTTGTTTTGTCCGCAAATGCTTGATGTTTTGGACAAAATCTGGTTAAACTTTTGAAACCTTGACTATCGATGAACTTTAAAAACTTAGTTCAAAAACATAAATATGATATGCTTTGATTTGTTTTAAAGTACTTCCAACATCTCATAAACTTATTAGATTTTATAAACCTATTCTAATAAAATCATGGTAACAATCGCACCTTGAAGACCATGAAAAAAAATTCAAATCTCAAATATGTTTAACCAGAAGGAACAATACCAAAGATCATTTTCTTATGTGAGGAACTACTGATTTGAATTTCAGATTGAGAATAAGTGATTCTCTTATTATGTAGTAAAGAGAATGTTTGATGATGAACATTTATGTAGCCTATTTCCAATGCTTGCCTTAAATCTATTTGTAGTTGTAACTGACACATCATAGGCTTCTTACTGAAGTTATTGTTTGTACTAAAAACTGTTAAAGAATTCAATCTCGATTCTTGTATCTTTTCTTATTGCGATACTGGAGTTTGTATATAGGACCACACTTGATTTTTCCACATAAAAAGGGAAATCCATCCTTAACTTGCAATTAGATTCTTGTTCCCTTACCAGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATCCCGTATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAAGAAGAAGTGCCTGAGGATGGTACGTGATATATCTTGAACTTGTGATTTCCTAACTTCCCAGCAACTTAATTTTCTGTTATCTTCTTCCTTTTTCTTCCTTTTTTCATCCTTATTTCTATCCCCTTTTCCTGTTTCTTGACATTGTTCCATTTTGACTCACCATTAATACAATGGTTATAAGGTAGAGCCTCTCTACCTTTTGCGTCAAAAAAAAAAAAAAACCCCAGCAACTCATACTCACCTTTAGTGTGTACAAGTACAAGAACAAAGATAATGTGCCTACCAGGGAACTTATAGACTTAATTTTCTTTGTTTAGTAATTAGTACTCATTACAACTTCAGTGAGTTTAAGTTCTGTAGACTTGTATGTTTGCATTCAGTAGCTGAAAAAACCGAACCCGTATAAAGAAACAGTAGCAACAAAAGAAGAATTTATATTCCTCCATGGCGCCTCCAATGCCACATAAAAGTATGCTATAATTTCACTGCACAAAAAATGATCCTGCTGCTCACATTATCGAAGTCAGTGATACAGTAGGACTTATTTTGGGTGGAAATGTTGCAGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001038

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001038&oldid=38762"