BGIOSGA001050

From RiceWiki
Revision as of 10:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001050| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001050, complete gene.| tag = P0047F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001050

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001050, complete gene.

LocusTag

P0047F09.1-2

Ensembl Transcript ID

BGIOSGA001050-TA

Ensembl Protein ID

BGIOSGA001050-PA

Length

2462

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30735131..30737592

Sequence Coding Region

30737254..30737592,30735131..30737137

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30735131..30737592 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30735131..30737592 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGATTGGTCATCGGCTACCTGGCCGTGCAGCTCTCGCTGATGTCTCTGCTGCTCTGCCCGTCCTCGTCGACGGCGCAGCACACGCTGGGCAGATCCTCCATGTCGGTGGAAGACCACGCGCGGGCGTTCCTGGTGTCGACGGACGGCAGCTTCTCCTGCGGGTTCCTCGAGGGCGGCGACAACGCCTTCACCTTCTCCGTCTGGTTCACCGCCGACCCGAACAGGACCGCCGTCTGGTCGGCCAACCGCGACGCCCCCGTGAACGGCAGGGGCTCCAGGGTCTCGTTCAGCCGCGACGGCGAGCTGGCCCTCGCCGACACCAACGGGACCACGAGCTTCGAGTGGCCGACGGACACGCTGCTCCCGTCGCAGCGGTTCACCAAGCAGACCAAGCTCGTCGCCGGCTACTTCAGCCTCTACTTCGACAACGACAACGTGCTGCGCATGCTCTACGACGGCCCGGAGATCGCCAGCATCTACTGGCCGCTGCCGGGGTTGACCGTGTTCGAAAACGGCCGGACGAACTACAACAGCACGAGGATCGCCATCCTCGACGACGCCGGCGTGTTCCTGTCCTCCGACCAGACGAAAGCCGAGGCCACCGATCTGGGCCTCGGCATCAAGAGGCGGATAACCATCGAACAGGACGGCAACCTGAGAATGTACAGCCTGAACGCGTCCACCGGAGGCTGGGCGGTGACATGGTCGGCGCTCAAGCAGCCATGCCAAGCTCACGGGCTGTGCGGCAAAAACGGCCTCTGCGAGTACCTGCCGAGTCTCCGGTGCTCGTGCCTACCTGGGTACGAGATGGTCGACCGCCGGGACTGGAGGAGAGGCTGCAAGCCGACGTTCCCAGTCGGCAACTGCAGCCAGGGATCGGCGCCGCCGCCGTCGCCGGCGACGGCGCCGCCGCAGTTCAAGTTCATCGAGGTGGCCCAGACTGATTTTTTCGGCTTCGACCTGGGGTACACCGAGTCCATCACGTTCAAGCAGTGCAGGGACCAGTGCATGAACAACTGCCAGTGCACCGCCTTCTCGTACAGGCTCGACGGCCGGGGAAAATGCTACCCGAAAGGCACGCTGTTCAACGGCTTCACGTCGGCGAATTTCCCCGGGAGCATCTACCTCAAGGTGCCCCTCGACTTCAACGCCTCGTCGCCGAGGGTCTCCGCGCAGCGCGCCGCCGGCCTCGCCTGCGGTGCCAACGTCACCGTCGTGACCGTGTCCGCTGACGTGTACGGGATGGCGCCAGGAAGCAACGGGCAGTGGACCTACTTCTTCGTCTTCGCCGGCGTGCTCGGAGTCCTGGACATCCTCTTCATCGCGACGGGCTGGTGGTTCCTCTCCAGCAAGCAGAGCATCCCCAGCTCGCTGCAGGCAGGGTACAAGATGGTGATGACGAGCCAGTTCAGGCGGTTCACGTACCGGGAGCTCAAGGGCGCGACGGCCAACTTCAAGGAGGAGCTCGGCCGCGGCGGCTCCGGCGCGGTGTACCGCGGCGTGCTCGACGGCGGTAAGGTGGTGGCGGTGAAGAGGCTGGCGGTCGACGTGACGATGCAGGGGGACGAGGAGTTCTGGTCGGAGATGACGGTGCTCGGGCGGATCAACCACATCAATCTTGTCAGGATCTGGGGATTCTGCTCCGAGCGCAAGCACAAGCTGCTGGTGTACGAGTACGTGGAGAACCAGTCGCTGGACCGGCACCTGTTCGACACGGCCGAAGGCGGCGGCGGCATGTCGACGACGACGCTGGCGTGGAAAGATCGGTACAAGATCGCGCTGGGCACGGCGAGGGGCCTCGCCTACCTCCACCACGAGTGCCTCGAGTGGGTCATCCACTGCGACATGAAGCCGGAGAACATCCTCCTGACGAGGGACTTCGACGCCAAGATCGCCGACTTCGGGCTGGCCAAGCTGTCGAAGCGGGACGGCGGCGCCGGCGTGGAGCTCACCCACATGAGGGGGACGTCGGGGTACATGGCGCCGGAGTGGGCGCTGAACGTGCCCATCAACGCCAAGGTGGACGTGTACAGCTTCGGCATTGTGCTGCTGGAGATCGTGGTCGGGAGCCGGGTGGCGGACCAGAGGACGGAGGCCGGCGAGCCGCTGCAGCTGCCGCAGATCACGCAGGCGCTGAGGCATGTGGTGGACAGCGGCGATGTGATGTCCCTAGTGGATGCCAGGCTGCAGGGGCAGTTCAACCCTCGGCAGGCCATGGAGATGGTGAGGATTTCTCTGGCGTGTATGGAGGACAGGAACAGCAGGCCGACCATGGACGACATCGCCAAGTCTCTCACCGCGTTCGACGACGAGGACGAACACCCTGCCTACCACTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGLVIGYLAVQLSLMSLLLCPSSSTAQHTLGRSSMSVEDHARAFLVSTDGSFSCGFLEGGDNAFTFSVWFTADPNRTAVWSANRDAPVNGRGSRVSFSRDGELALADTNGTTSFEWPTDTLLPSQRFTKQTKLVAGYFSLYFDNDNVLRMLYDGPEIASIYWPLPGLTVFENGRTNYNSTRIAILDDAGVFLSSDQTKAEATDLGLGIKRRITIEQDGNLRMYSLNASTGGWAVTWSALKQPCQAHGLCGKNGLCEYLPSLRCSCLPGYEMVDRRDWRRGCKPTFPVGNCSQGSAPPPSPATAPPQFKFIEVAQTDFFGFDLGYTESITFKQCRDQCMNNCQCTAFSYRLDGRGKCYPKGTLFNGFTSANFPGSIYLKVPLDFNASSPRVSAQRAAGLACGANVTVVTVSADVYGMAPGSNGQWTYFFVFAGVLGVLDILFIATGWWFLSSKQSIPSSLQAGYKMVMTSQFRRFTYRELKGATANFKEELGRGGSGAVYRGVLDGGKVVAVKRLAVDVTMQGDEEFWSEMTVLGRINHINLVRIWGFCSERKHKLLVYEYVENQSLDRHLFDTAEGGGGMSTTTLAWKDRYKIALGTARGLAYLHHECLEWVIHCDMKPENILLTRDFDAKIADFGLAKLSKRDGGAGVELTHMRGTSGYMAPEWALNVPINAKVDVYSFGIVLLEIVVGSRVADQRTEAGEPLQLPQITQALRHVVDSGDVMSLVDARLQGQFNPRQAMEMVRISLACMEDRNSRPTMDDIAKSLTAFDDEDEHPAYHS</aaseq>

Gene Sequence

<dnaseqindica>1..339#456..2462#ATGGCTGGATTGGTCATCGGCTACCTGGCCGTGCAGCTCTCGCTGATGTCTCTGCTGCTCTGCCCGTCCTCGTCGACGGCGCAGCACACGCTGGGCAGATCCTCCATGTCGGTGGAAGACCACGCGCGGGCGTTCCTGGTGTCGACGGACGGCAGCTTCTCCTGCGGGTTCCTCGAGGGCGGCGACAACGCCTTCACCTTCTCCGTCTGGTTCACCGCCGACCCGAACAGGACCGCCGTCTGGTCGGCCAACCGCGACGCCCCCGTGAACGGCAGGGGCTCCAGGGTCTCGTTCAGCCGCGACGGCGAGCTGGCCCTCGCCGACACCAACGGGACCACGGTGTGGTCGAGCAAAACGACGGCTGGCACCGGGAACAGAAGGGGCCTGACCGTCTCCCTCCGCGACACGGGAACCTCGTCGTCGGGGACCCGTCGACCGGCCTCGCCGTGTGGCAGAGCTTCGAGTGGCCGACGGACACGCTGCTCCCGTCGCAGCGGTTCACCAAGCAGACCAAGCTCGTCGCCGGCTACTTCAGCCTCTACTTCGACAACGACAACGTGCTGCGCATGCTCTACGACGGCCCGGAGATCGCCAGCATCTACTGGCCGCTGCCGGGGTTGACCGTGTTCGAAAACGGCCGGACGAACTACAACAGCACGAGGATCGCCATCCTCGACGACGCCGGCGTGTTCCTGTCCTCCGACCAGACGAAAGCCGAGGCCACCGATCTGGGCCTCGGCATCAAGAGGCGGATAACCATCGAACAGGACGGCAACCTGAGAATGTACAGCCTGAACGCGTCCACCGGAGGCTGGGCGGTGACATGGTCGGCGCTCAAGCAGCCATGCCAAGCTCACGGGCTGTGCGGCAAAAACGGCCTCTGCGAGTACCTGCCGAGTCTCCGGTGCTCGTGCCTACCTGGGTACGAGATGGTCGACCGCCGGGACTGGAGGAGAGGCTGCAAGCCGACGTTCCCAGTCGGCAACTGCAGCCAGGGATCGGCGCCGCCGCCGTCGCCGGCGACGGCGCCGCCGCAGTTCAAGTTCATCGAGGTGGCCCAGACTGATTTTTTCGGCTTCGACCTGGGGTACACCGAGTCCATCACGTTCAAGCAGTGCAGGGACCAGTGCATGAACAACTGCCAGTGCACCGCCTTCTCGTACAGGCTCGACGGCCGGGGAAAATGCTACCCGAAAGGCACGCTGTTCAACGGCTTCACGTCGGCGAATTTCCCCGGGAGCATCTACCTCAAGGTGCCCCTCGACTTCAACGCCTCGTCGCCGAGGGTCTCCGCGCAGCGCGCCGCCGGCCTCGCCTGCGGTGCCAACGTCACCGTCGTGACCGTGTCCGCTGACGTGTACGGGATGGCGCCAGGAAGCAACGGGCAGTGGACCTACTTCTTCGTCTTCGCCGGCGTGCTCGGAGTCCTGGACATCCTCTTCATCGCGACGGGCTGGTGGTTCCTCTCCAGCAAGCAGAGCATCCCCAGCTCGCTGCAGGCAGGGTACAAGATGGTGATGACGAGCCAGTTCAGGCGGTTCACGTACCGGGAGCTCAAGGGCGCGACGGCCAACTTCAAGGAGGAGCTCGGCCGCGGCGGCTCCGGCGCGGTGTACCGCGGCGTGCTCGACGGCGGTAAGGTGGTGGCGGTGAAGAGGCTGGCGGTCGACGTGACGATGCAGGGGGACGAGGAGTTCTGGTCGGAGATGACGGTGCTCGGGCGGATCAACCACATCAATCTTGTCAGGATCTGGGGATTCTGCTCCGAGCGCAAGCACAAGCTGCTGGTGTACGAGTACGTGGAGAACCAGTCGCTGGACCGGCACCTGTTCGACACGGCCGAAGGCGGCGGCGGCATGTCGACGACGACGCTGGCGTGGAAAGATCGGTACAAGATCGCGCTGGGCACGGCGAGGGGCCTCGCCTACCTCCACCACGAGTGCCTCGAGTGGGTCATCCACTGCGACATGAAGCCGGAGAACATCCTCCTGACGAGGGACTTCGACGCCAAGATCGCCGACTTCGGGCTGGCCAAGCTGTCGAAGCGGGACGGCGGCGCCGGCGTGGAGCTCACCCACATGAGGGGGACGTCGGGGTACATGGCGCCGGAGTGGGCGCTGAACGTGCCCATCAACGCCAAGGTGGACGTGTACAGCTTCGGCATTGTGCTGCTGGAGATCGTGGTCGGGAGCCGGGTGGCGGACCAGAGGACGGAGGCCGGCGAGCCGCTGCAGCTGCCGCAGATCACGCAGGCGCTGAGGCATGTGGTGGACAGCGGCGATGTGATGTCCCTAGTGGATGCCAGGCTGCAGGGGCAGTTCAACCCTCGGCAGGCCATGGAGATGGTGAGGATTTCTCTGGCGTGTATGGAGGACAGGAACAGCAGGCCGACCATGGACGACATCGCCAAGTCTCTCACCGCGTTCGACGACGAGGACGAACACCCTGCCTACCACTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001050