BGIOSGA001060

From RiceWiki
Revision as of 10:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001060| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001060, complete gene.| tag = OsI_031...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001060, complete gene.

LocusTag

OsI_03191

Ensembl Transcript ID

BGIOSGA001060-TA

Ensembl Protein ID

BGIOSGA001060-PA

Length

3244

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30582338..30585581

Sequence Coding Region

30585309..30585581,30585229..30585260,30584993..30585053,30584478..30584606,30584254..30584361
,30583314..30583448,30583057..30583098,30582836..30582895,30582716..30582769
,30582602..30582626,30582338..30582429

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30582338..30585581 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30582338..30585581 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGAGGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGGGTAAATGGAAGCCTCTTTTATGGATACCTACGCAAGATATTGGCAATGTTGCAATCAGTGACGGTGATTATAATTATCCAGTTCAGGAGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAGACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAACCTCTTCCTTGAGGTACGATCTACTCCTGGCCATACTGCTGGCTGTGTGACTTATGTAACAGGTGAAGGCGATGATCAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTGCATTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MVALLRSCRRLIPHLSACAAAAPSSSSSCAPRARPISRGLRLLPVVLAMAGYSSGSAAEGRRLLFRQLFEKESSTYTYLLADVGDPEKPAVLGKWKPLLWIPTQDIGNVAISDGDYNYPVQELIDPVDRTVDRDLNLIKELGLKLVYAMNTHVHADHVTGTGLIKTKLPGVKSVIAKVSKAKADHFIEHGDKIYFGNLFLEVRSTPGHTAGCVTYVTGEGDDQPSPRMAFTGDALLIRACGRTDFQGGSSDELYESVHSQIFTLPKDTLLYPGHDYKGFTVSTVEEEVAYNARLTKDKETFKKIMDNLNLAYPKMIDVAVPANLLCGIQDPPPSKV</aaseq>

Gene Sequence

<dnaseqindica>1..273#322..353#529..589#976..1104#1221..1328#2134..2268#2484..2525#2687..2746#2813..2866#2956..2980#3153..3244#ATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGAGGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGGTGAGTAGTTGATGCTCTTGACCATCTGTTCGTTGTTCTGGGTATCAGTTGGGTAAATGGAAGCCTCTTTTATGGATACCGTAAGCAGGATTACTCTTTCAGTGGCTACTGCAGAAATGTAGATACCAACATAAATTAAATAGCAAACTAAATACTCCAAATAGGTATAATACTGGAATAATTGATTATTACCTGTGAATTGTGGTATCCCTAACTAATTTAAAGATCATCTTGCGTTTTTTTAATGTCTGACAGTACGCAAGATATTGGCAATGTTGCAATCAGTGACGGTGATTATAATTATCCAGTTCAGGAGGTGCATTTATAAACTATGAAAGATAATCAAATTACTTGATATCATTCTGATGGGTTACATATATTCATGTTATCTTGGACTTGGCACTACATTACATTAATGCGCAATCTCGCTAATTTGTTCAAGAATCCCAAAACTTAACCTTCTCCACGGTTTTGCTTAAGTATTTTCAAATAATTTGTTTTCTTAATTATCGTATTGATTGAGCCAAAACGAAAAAAAATGTAACCTTTTTCTCTATATATGTGACAGACTAGACTAGCGCAATAAGCACTAAACTAAATCAGAAAAAAATATTGATGCTGTTTTTGTAGATTTGATGTTTAGCTATAGTTGCTTCCATTTTGTTGATCACCTCCCTAATGTCCTTGGTTTTGTGTTATCAGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGGTAAATAGTTCCAACCTCTGAACTTCTCGAGATCTTGTGATATGTTTTCTTTTCATAGTCTTGATACTTTGTTCTCTTTGGTCATAACATGGTCATCTGATGGAATGTACTTGCAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAGACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAACCTCTTCCTTGAGGTATAATCCCATTTTAATTAGCTGTTTGGCTATGTGTTTCTTCTTTCATTTAGTAAGCACTGACATAATTTATGGGGACTATTGAAACTAGTCCTTTTGAGCTCTCTGGCTGAACTTAATAAACATTAATCCTGAACTCTCAACCACCCCACCCCCACCCCTCTGAATTTTATGGAGTATGGCAATTGCAGCAGTTCCCCTAGAATCTCACTCTATACAGGCTGCAAATATGAACGGATTGTCTACTTCTAATTATAAAAGGGCTTTTTCTGTATATGGTCATCTGAGTGGTCTGTTTGTGGTGGTGGTGGTCAGAGACATAATTTATGTGATCTATTCATATATGTATATTTTGTTTCCTTAATCATGTTAACTTTGTGGTGTTTGTCAGTAAGACGATAAACAGTTGTCCACACAGCTAATTCAGGACTTAAAAACTGTGCACTTTTGTAGGTTAGACTTGTATAACAAATTTAAAAGTATTTTCCATTGGTTCATACAAAATGAGGTAATGTGAATGTTTATGGAGATATGGTGTTTGGGTGATATTAAATATTTTCTCAGCTGTGCAACCATTGTTTGTGGATATGTTGATTCTTGAAATTTGTGTTCTTATTGAAAGTTTGGCTTTAGGTATTTATAGCATATCCATGACAGATATAATATGAATAAGAAAACGTATACTGTCAACCAAGCTGCTGAATAAAACAGCATTGAAAATTATGCATCTTTGTTCTATCCGTCATGTAATATTTTGGATATGATGAAATTTTCTGATATCAGAAATGGCAAAATTGCTTTTTAGGTACGATCTACTCCTGGCCATACTGCTGGCTGTGTGACTTATGTAACAGGTGAAGGCGATGATCAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGTAATTGTTACCACTGCCACTTCTTAATGGCTTAGCGATCAGGAACTGTTCTGTTTGAATTCTAAAGATACCGTGGTTAATTAAATTAATAGGGACTGAATGTATTCTGTCTGTTAGTCAAGCGTAAGTTTGCTTGCATACGGAAGCTCAGAATTCATGTTCTAGAGAAATTCTGTTTAAACATAGATTGTTTATTTTGTTTTCTGGTATTACAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTGCATTCGCAGGCAAGTATGCATTATCCTTTTCTTAAGACTAAATACACATCAGCTTATAGAATAGCATACCACTTTTTTTAGGTAATCATACATAATATTTTGAAACTAGGCACACATCATCTTCATACATAATATGAAGGGTAGGTAGCTGACTTTTTTATCCTTATCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTGCTCACTTTCTTAAAGCTCACTAATCAAGGTACCAGGCACTTGACTATTTTATTTTGCAGGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGTACATGCTACTTTGGCTAATTCTTTACACCCATCTAACTAATAAAAGCTATATTTTTTCTGATATTAATTTACTTGTTATGTTTATAGGAAACATTCAAGAAAATTATGGACAGTAAGTTTCTGAGTCTTTAACAATGGATATGTGCCTTTTCTTCTCGCATCAATTTATGAATATCCATTTTCATTATACTTCTGCTCACGTAGGCACTTACCAGATCAAATCTTACCTCCACTTTTTTAATACACTAAACAAGATCTGGATCGTTTACTCTGTCCACTTGCAGACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001060