BGIOSGA001103

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Revision as of 10:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001103| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001103, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA001103

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001103, complete gene.

LocusTag

OSJNBB0032K15.31

Ensembl Transcript ID

BGIOSGA001103-TA

Ensembl Protein ID

BGIOSGA001103-PA

Length

2817

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29619517..29622333

Sequence Coding Region

29621631..29622333,29620977..29621029,29620815..29620866,29620526..29620642,29620414..29620445
,29619517..29620293

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29619517..29622333 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29619517..29622333 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTCGCCACCACTGGGTGTAGGCACTGTAGCCGGCGATGGGGTCGACGTCCGCGCATCTTCACCTGGCGGGCTTCGACGGATTCACGTTCACGAGGGCGGCGACATCGGCAAGCTCCCCGTCGTCGAGCCGTCCTCTCGCAGTGGGCGCCGCATTGCCCCCCTCGCCAAGGAGCCCCCCAGCCGCGGCGTCGCCGAGCCGTCTTCTCGCTGCGAACGCCACCTCATCAAGGCCTCCACCCGCAGCCGCGTCGTCTCCAACCGTAGGGGGCTTGCTCGTCGTCAAGCTCGCCAGACCGCGGTCCGCGCGCCTCCCGCCGTGTTGTGCGTGAACCCCCGCGGGGCCAGCCCGCGCCCGGCTGCTGCTGAGGATATGGGGTCATCAAGGGATGAGCTCGTCGCCGTCTACAAGGGTGGCCGAATTCTGTACCTCGCCTACTTCCGTACCTTCAAACGTGCAGACCATCCAGGCGTCACCCTCTCACCGCGACTGAGCACGACCCCTGACGGCGACCACCATGGCGAGATCGTCTGGCCTGCACCCTCGCGCTCCTTGCTCGGCGGCTGCAGAGCGGAAGGCGCCAGCCGACACGGTGTCCATCGCCGCGGACTCCGACATCCCTCACCCTCAGCTCGTCAGCCACCCAACCTTTACCATCTCCTGGAGGATTCTGTCAGTGGTCTGGTAGACTCTACAATAGCTATGCAAATCTTTGATCACAAGAGCAATGATAACGAGCTAAAGTTCTCTCAGGAAGAAAAAAAAGATATGATTGAGTCGTTTGGTAAACTGAAGGTGTCCAAAGTGAGGAGTGAATTCCTGAAGATGGAAAAGAGCTTTATGAAACTGATAGAGTCATCTGATAAGGCCATAGAGAGACAGATAGTTGATTCAATATATTCCTTCGCACAAGACAACCAAGTAGTTGTTACTAAATGCATTATGCTCTGTCATCGTGGTTGGAATACAAAGCGCTATCTGATCCCAGTAGCGAAAGTGACAACTCTGAAGTTGATCCAAGTTATAACCCTGAATCTGATGGGGATGACCTGGAACCTGGTAATTCTGGTACTATCCAAGGTAGCAATGACGGTGATGATGATGATGGTGGTGGCGGGGATGATGAAGAAGAAGATGACGATGAAGAGGATGATGACGATGAGGAGGAAAATGAAGAGGACGATGATGAAGAGGAGGATGAGGAAGAGGACGACAATGAAGAGGAGGACGAGGAAGAGGACGATGAAGAGGAGGACGATGAAAGAGGAGGATGAGGACTATGACCCGGTACATGATGATGATGAAGATGATGATGATGAGTACATGAATGGACTTGCCAACTTGCCACCACTTCCTCCAGGCACAGAGTACTGGAACGGTGTTACAGTTGTGAACCGTGTTTCTGCCATTCGCAATCTCAATCCCCAATTCCACGTCCTGGGCTTCGGTCCCAATCTTACTATCCACCAGCGAGTAAGGCTGTGGGCAACTGGAGATGCAATGGGTTTTGATTTCCACCCTACTGAGATGCTGAGGTATGTTTGGAGGATGGAGTTGCTGCTGAACGGGCAGAACCCAGGGAACCCGTTGGACGCTGTGAATGAGCCTCCAGTTCCTAATCCTGGTGATTACGATGATGAGGGCTGGATTACAGATGAAGACATGGTTGGCGGCATTGCATTGGATGATCTGGGTCTGGACAGTAGCAGCAGTGACATTGGCGATGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSPPLGVGTVAGDGVDVRASSPGGLRRIHVHEGGDIGKLPVVEPSSRSGRRIAPLAKEPPSRGVAEPSSRCERHLIKASTRSRVVSNRRGLARRQARQTAVRAPPAVLCVNPRGASPRPAAAEDMGSSRDELVAVYKGGRILYLAYFRTFKRADHPGVTLSPRLSTTPDGDHHGEIVWPAPSRSLLGGCRAEGASRHGVHRRGLRHPSPSARQPPNLYHLLEDSVSGLVDSTIAMQIFDHKSNDNELKFSQEEKKDMIESFGKLKVSKVRSEFLKMEKSFMKLIESSDKAIERQIVDSIYSFAQDNQVVVTKCIMLCHRGWNTKRYLIPVAKVTTLKLIQVITLNLMGMTWNLVILVLSKVAMTVMMMMVVAGMMKKKMTMKRMMTMRRKMKRTMMKRRMRKRTTMKRRTRKRTMKRRTMKEEDEDYDPVHDDDEDDDDEYMNGLANLPPLPPGTEYWNGVTVVNRVSAIRNLNPQFHVLGFGPNLTIHQRVRLWATGDAMGFDFHPTEMLRYVWRMELLLNGQNPGNPLDAVNEPPVPNPGDYDDEGWITDEDMVGGIALDDLGLDSSSSDIGDA</aaseq>

Gene Sequence

<dnaseqindica>1..703#1305..1357#1468..1519#1692..1808#1889..1920#2041..2817#ATGTCCTCGCCACCACTGGGTGTAGGCACTGTAGCCGGCGATGGGGTCGACGTCCGCGCATCTTCACCTGGCGGGCTTCGACGGATTCACGTTCACGAGGGCGGCGACATCGGCAAGCTCCCCGTCGTCGAGCCGTCCTCTCGCAGTGGGCGCCGCATTGCCCCCCTCGCCAAGGAGCCCCCCAGCCGCGGCGTCGCCGAGCCGTCTTCTCGCTGCGAACGCCACCTCATCAAGGCCTCCACCCGCAGCCGCGTCGTCTCCAACCGTAGGGGGCTTGCTCGTCGTCAAGCTCGCCAGACCGCGGTCCGCGCGCCTCCCGCCGTGTTGTGCGTGAACCCCCGCGGGGCCAGCCCGCGCCCGGCTGCTGCTGAGGATATGGGGTCATCAAGGGATGAGCTCGTCGCCGTCTACAAGGGTGGCCGAATTCTGTACCTCGCCTACTTCCGTACCTTCAAACGTGCAGACCATCCAGGCGTCACCCTCTCACCGCGACTGAGCACGACCCCTGACGGCGACCACCATGGCGAGATCGTCTGGCCTGCACCCTCGCGCTCCTTGCTCGGCGGCTGCAGAGCGGAAGGCGCCAGCCGACACGGTGTCCATCGCCGCGGACTCCGACATCCCTCACCCTCAGCTCGTCAGCCACCCAACCTTTACCATCTCCTGGAGGATTCTGTCAGTGGTCTGGTAGACTCTACAATAGGTATCGTTTACCCCTGTGATATCCATGATTCTTCCTGTGTATGTAGCCTTCAAGTTTTTCGAGTTTCATCTTTTTGGTGCATGTGGCAGTTTGAATCTCTAGCGTTTTCAAATCAATCTCTAGCATTTTAGGCCGTAATCACAATTATAATTGTGCGCTTGAGTTTGTACCAGATGCATGTGGCAGTTTGAACCTCTAGCGTTTTCAAATCAATCTCTAGCATTTTAGGCCGTAATCACAATTACAATTGTGCGCTTGAGTTTGTACCAGACAAATTTGTTGTGTGGTGAGATCTATTGCAAATGTAATGGATTGAGAGAGGAGTTTAAGGTTATGTTGGCAGTTACAGCATAGATTTCTTTCTTTTTTGTAGAGAAAAGGAAAAACATCCAAAAAGGGCTTTCATGCATATGCAAGAAATATGTGTGTGCATACTGCTTTAATAAATGAATCTTTCCATTTATAGAAAACTTTGATCAAAGCACCAAACATGAACAGTATGCAATTTTTGCTTGCATTTTACTACTGCAGTGTGCTTTTCTTGTTCATATATTAATATTTTATATAACTTAGAGATTAATGTACTGCATTTGTTATGTAGCTATGCAAATCTTTGATCACAAGAGCAATGATAACGAGCTAAAGTTCTCTCAGGTTGGTTGCCACTTTCTAATCTGTATTAAGGCACTAAAATACTCTGCATATTGACATATATAACTACATGTTTGCTGGTAACCTAATATTACCCATTATTACTTAATCAGGAAGAAAAAAAAGATATGATTGAGTCGTTTGGTAAACTGAAGGTGTCCAAAGGTACGTTGTACATGCCTTTGGTTAAGATAAGGGTATATTCAACTGTAACCTTTGAAATTATTGTAGTTGTAAACTTATGTTTTCATATCCGTTTGCTATTCATAAATAACTGTGGGTTTGTGTAATATGGTGACTGTGACATGTTTGTATAATTATTGTATTCCATGAACAGTGAGGAGTGAATTCCTGAAGATGGAAAAGAGCTTTATGAAACTGATAGAGTCATCTGATAAGGCCATAGAGAGACAGATAGTTGATTCAATATATTCCTTCGCACAAGACAACCAAGGTATACACATTCACATTACTCGGTTTTTTATTTAGGTGCTACTAAATGCATTATGTTCTGTCATGTATTCTTATTTTCAGTAGTTGTTACTAAATGCATTATGCTCTGTCATGTATTCTTATTTACAATAGTTGTTACTAAATGCATTATGTTCTTTCTTGTATTCTTATTTACAATAGTTGTTACTAAATGCATTGTGTTGTCAGGTTAATGACAATTTGTTATCATATAGCGTGGTTGGAATACAAAGCGCTATCTGATCCCAGTAGCGAAAGTGACAACTCTGAAGTTGATCCAAGTTATAACCCTGAATCTGATGGGGATGACCTGGAACCTGGTAATTCTGGTACTATCCAAGGTAGCAATGACGGTGATGATGATGATGGTGGTGGCGGGGATGATGAAGAAGAAGATGACGATGAAGAGGATGATGACGATGAGGAGGAAAATGAAGAGGACGATGATGAAGAGGAGGATGAGGAAGAGGACGACAATGAAGAGGAGGACGAGGAAGAGGACGATGAAGAGGAGGACGATGAAAGAGGAGGATGAGGACTATGACCCGGTACATGATGATGATGAAGATGATGATGATGAGTACATGAATGGACTTGCCAACTTGCCACCACTTCCTCCAGGCACAGAGTACTGGAACGGTGTTACAGTTGTGAACCGTGTTTCTGCCATTCGCAATCTCAATCCCCAATTCCACGTCCTGGGCTTCGGTCCCAATCTTACTATCCACCAGCGAGTAAGGCTGTGGGCAACTGGAGATGCAATGGGTTTTGATTTCCACCCTACTGAGATGCTGAGGTATGTTTGGAGGATGGAGTTGCTGCTGAACGGGCAGAACCCAGGGAACCCGTTGGACGCTGTGAATGAGCCTCCAGTTCCTAATCCTGGTGATTACGATGATGAGGGCTGGATTACAGATGAAGACATGGTTGGCGGCATTGCATTGGATGATCTGGGTCTGGACAGTAGCAGCAGTGACATTGGCGATGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001103

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