BGIOSGA001277

From RiceWiki
Revision as of 10:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001277| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001277, complete gene.| tag = B1085F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001277

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001277, complete gene.

LocusTag

B1085F01.5

Ensembl Transcript ID

BGIOSGA001277-TA

Ensembl Protein ID

BGIOSGA001277-PA

Length

2862

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26377890..26380751

Sequence Coding Region

26377890..26380751

Genome Context

<gbrowseImage1> name=IndicaChromosome01:26377890..26380751 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:26377890..26380751 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGTGTTTAGATGCATCCACGTCCTAATAGCCTTAGCCTTGCTTTTGTTCATCCCAATCATCTCCAAGGAGGCCTCAGCCAATGCCAATAGCACAGGTGGTTGTATTCCAAGTGAGAGATCTGCACTTATCAGCTTCAAATCAGGATTATTAGACCCTGGAAACCTCCTTTCGTCATGGGAGGGTGACGATTGTTTTCAATGGAATGGCGTGTGGTGCAACAACGAGACCGGGCATATTGTTGAGCTAAATCTCCCAGGAGGTAGCTGCAACATCTTGCCCCCATGGGTTCCGCTGGAACCAGGACTCGGAGGCAGCATAGGCCCCTCGTTGCTTGGCTTAAAGCAACTGGAGCATCTCGACCTCAGCTGCAACAATTTCAGTGGGACGCTACCGGAGTTCTTGGGCTCTCTCCACAACCTGAGATCTCTCGACCTATCCTGGTCGACATTCGTTGGGACAGTGCCACCGCAGCTGGGTAATCTCTCCAACTTGCGCTACTTCAGTCTTGGTTCTAATGATAATTCTAGCTTATATTCAACGGATGTATCCTGGTTGTCACGGTTATCTTCTCTCGAGCATCTAGACATGAGCCTTGTGAATCTCAGTGCGGTTGTGGACTGGGTTTCGGTGGTGAACAAGCTTCCATCTCTTAGATTTCTCCGTTTGTTTGGATGCCAGCTTAGCAGCACGGTCGATTCTGTTCCGAACAACAACCTAACATCTCTTGAAACTCTGGACCTTTCACTTAATAATTTCAACAAGAGGATCGCACCCAATTGGTTTTGGGATTTAACTAGCCTTAAAAATCTAGATATCTCATATAGTGGTTTCTATGGACCATTTCCAAACGAGATAGGCAATATGACCTCTATTGTGGATATTGATTTATCGGGCAATAATCTTGTGGGGATGATACCATTTAATCTGAAGAACCTATGTAACTTGGAGAAATTTGCCGCTGCTGGAACCAACATCAATGGGAATATAACGGAAGTATTCAATAGATTGCCTAGATGCTCATGGAATATGTTACAAGTGTTGTTTCTACCGGACTGCAACTTGACTGGAAGCCTACCAACAACACTAGAACCCTTGAGCAATTTGAGCATGCTTGAGCTTGGTAATAACAATCTCACAGGTCCGGTTCCGCTCTGGATAGGAGAGCTCACTAATCTAACAAAGTTGGGCCTCAGCTCCAACAATCTAGATGGGGTCATACATGAAGGCCATTTATCAGGCCTAGAAAGTCTAGATTGGTTGATCTTGTCAGATAACAACCACATAGCCATCAAGGTGAATTCAACCTGGGTTCCTCCTTTCAAGCAAATAACAGATATTGAACTTCGGTCCTGTCAGTTAGGGCCTAAATTCCCAACTTGGCTCAGATATCTAACACATGTAGACAATCTTGATATCTCAAACACAAGCATATCAGACAAGGTTCCTGACTGGTTTTGGAAAGCAGCGTCCTCAGTAACACATTTAAATATGAGAAACAATCAGATTGCAGGTGCCCTCCCATCTACATTGGAGTACATGAGAACGATCGAAATGGATCTCAGTTCTAATAGGTTTAGTGGTCCAGTACCCAAGCTTCCTATCAATCTCACCAGCTTAGACATCTCAAAGAACAATTTATCCGGGCCTCTACCATCAGACATAGGAGCGTCAGCTCTAGCATCACTTGTTCTTTATGGCAACTCCCTTTCTGGTTCAATTCCATCTTATTTGTGCAAGATGCAGTCTCTGGAACTGTTGGATATATCAAGAAACAAGATAACTGGGCCACTTCCTGATTGCGCAATCAATTCAAGCTCAGCAAATTCCACATGTATGAATATTATCAATATAAGCTTGAGAAACAATAATATCTCTGGACAATTTCCTTCATTCTTTAAGAACTGCAAAAACCTTGTTTTTCTGGATCTTGCTGAAAATCAATTATCTGGGACACTGCCTACATGGATCGGGGGAAAATTACCTTCTTTGGTATTCTTACGGCTACGTTCTAATAGCTTTAGTGGTCATATTCCAATTGAACTTACCAGTCTGGCGGGTCTTCAATATTTAGACCTTGCACATAACAACTTTTCAGGATGCATACCGAATTCTTTGGCGAAATTTCATAGGATGACACTCGAACAAGATAAAGAAGACAGATTTTCAGGGGCTATTAGATATGGAATTGGGATCAATGATAATGACCTGGTTAATTATATTGAGAACATAACTGTAGTCACAAAAGGTCAAGAACGCCTATATACAGGTGAAATCGTATACATGGTGAACATTGATTTATCTAGTAACAATCTTACTGGAGAGATTCCTGAAGAGATTATCAGTCTTGTTGCGTTGACAAACCTGAACTTATCATGGAATAGCTTAAGTGGACAAATTCCTGAGAAGATTGGTTCCTTGTCACAATTGGAGTCCCTTGATTTGTCACACAATGTGCTTTCTGGTGGGATTCCCAGCAGTATAGCATCTCTTACCTACTTGAGCCACATGAATTTGTCGTACAACAATCTTTCTGGAAGAATTCCAGCAGGAAATCAACTCGACATTCTTGAAGACCCTGCATCTATGTATGTTGGAAACATCGATCTCTGTGGGCATCCTCTACCAAATAACTGCTCTATCAATGGTGATACTAAAATTGAACGAGATGACTTGGTCAACATGTCATTTCACTTCAGCATGATCATCGGTTTCATGGTTGGCCTCTTGCTAGTATTCTATTTTATGCTCTTCAGCAGAAGATGGAGAAATACTTGCTTTGTGTTTGTCGATGGCTTGTATGACAGAACGTATGTTCAAGTGGCCGTAACCTGCAGGAGGTTATGGAGGAGAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MDVFRCIHVLIALALLLFIPIISKEASANANSTGGCIPSERSALISFKSGLLDPGNLLSSWEGDDCFQWNGVWCNNETGHIVELNLPGGSCNILPPWVPLEPGLGGSIGPSLLGLKQLEHLDLSCNNFSGTLPEFLGSLHNLRSLDLSWSTFVGTVPPQLGNLSNLRYFSLGSNDNSSLYSTDVSWLSRLSSLEHLDMSLVNLSAVVDWVSVVNKLPSLRFLRLFGCQLSSTVDSVPNNNLTSLETLDLSLNNFNKRIAPNWFWDLTSLKNLDISYSGFYGPFPNEIGNMTSIVDIDLSGNNLVGMIPFNLKNLCNLEKFAAAGTNINGNITEVFNRLPRCSWNMLQVLFLPDCNLTGSLPTTLEPLSNLSMLELGNNNLTGPVPLWIGELTNLTKLGLSSNNLDGVIHEGHLSGLESLDWLILSDNNHIAIKVNSTWVPPFKQITDIELRSCQLGPKFPTWLRYLTHVDNLDISNTSISDKVPDWFWKAASSVTHLNMRNNQIAGALPSTLEYMRTIEMDLSSNRFSGPVPKLPINLTSLDISKNNLSGPLPSDIGASALASLVLYGNSLSGSIPSYLCKMQSLELLDISRNKITGPLPDCAINSSSANSTCMNIINISLRNNNISGQFPSFFKNCKNLVFLDLAENQLSGTLPTWIGGKLPSLVFLRLRSNSFSGHIPIELTSLAGLQYLDLAHNNFSGCIPNSLAKFHRMTLEQDKEDRFSGAIRYGIGINDNDLVNYIENITVVTKGQERLYTGEIVYMVNIDLSSNNLTGEIPEEIISLVALTNLNLSWNSLSGQIPEKIGSLSQLESLDLSHNVLSGGIPSSIASLTYLSHMNLSYNNLSGRIPAGNQLDILEDPASMYVGNIDLCGHPLPNNCSINGDTKIERDDLVNMSFHFSMIIGFMVGLLLVFYFMLFSRRWRNTCFVFVDGLYDRTYVQVAVTCRRLWRRN</aaseq>

Gene Sequence

<dnaseqindica>1..2862#ATGGACGTGTTTAGATGCATCCACGTCCTAATAGCCTTAGCCTTGCTTTTGTTCATCCCAATCATCTCCAAGGAGGCCTCAGCCAATGCCAATAGCACAGGTGGTTGTATTCCAAGTGAGAGATCTGCACTTATCAGCTTCAAATCAGGATTATTAGACCCTGGAAACCTCCTTTCGTCATGGGAGGGTGACGATTGTTTTCAATGGAATGGCGTGTGGTGCAACAACGAGACCGGGCATATTGTTGAGCTAAATCTCCCAGGAGGTAGCTGCAACATCTTGCCCCCATGGGTTCCGCTGGAACCAGGACTCGGAGGCAGCATAGGCCCCTCGTTGCTTGGCTTAAAGCAACTGGAGCATCTCGACCTCAGCTGCAACAATTTCAGTGGGACGCTACCGGAGTTCTTGGGCTCTCTCCACAACCTGAGATCTCTCGACCTATCCTGGTCGACATTCGTTGGGACAGTGCCACCGCAGCTGGGTAATCTCTCCAACTTGCGCTACTTCAGTCTTGGTTCTAATGATAATTCTAGCTTATATTCAACGGATGTATCCTGGTTGTCACGGTTATCTTCTCTCGAGCATCTAGACATGAGCCTTGTGAATCTCAGTGCGGTTGTGGACTGGGTTTCGGTGGTGAACAAGCTTCCATCTCTTAGATTTCTCCGTTTGTTTGGATGCCAGCTTAGCAGCACGGTCGATTCTGTTCCGAACAACAACCTAACATCTCTTGAAACTCTGGACCTTTCACTTAATAATTTCAACAAGAGGATCGCACCCAATTGGTTTTGGGATTTAACTAGCCTTAAAAATCTAGATATCTCATATAGTGGTTTCTATGGACCATTTCCAAACGAGATAGGCAATATGACCTCTATTGTGGATATTGATTTATCGGGCAATAATCTTGTGGGGATGATACCATTTAATCTGAAGAACCTATGTAACTTGGAGAAATTTGCCGCTGCTGGAACCAACATCAATGGGAATATAACGGAAGTATTCAATAGATTGCCTAGATGCTCATGGAATATGTTACAAGTGTTGTTTCTACCGGACTGCAACTTGACTGGAAGCCTACCAACAACACTAGAACCCTTGAGCAATTTGAGCATGCTTGAGCTTGGTAATAACAATCTCACAGGTCCGGTTCCGCTCTGGATAGGAGAGCTCACTAATCTAACAAAGTTGGGCCTCAGCTCCAACAATCTAGATGGGGTCATACATGAAGGCCATTTATCAGGCCTAGAAAGTCTAGATTGGTTGATCTTGTCAGATAACAACCACATAGCCATCAAGGTGAATTCAACCTGGGTTCCTCCTTTCAAGCAAATAACAGATATTGAACTTCGGTCCTGTCAGTTAGGGCCTAAATTCCCAACTTGGCTCAGATATCTAACACATGTAGACAATCTTGATATCTCAAACACAAGCATATCAGACAAGGTTCCTGACTGGTTTTGGAAAGCAGCGTCCTCAGTAACACATTTAAATATGAGAAACAATCAGATTGCAGGTGCCCTCCCATCTACATTGGAGTACATGAGAACGATCGAAATGGATCTCAGTTCTAATAGGTTTAGTGGTCCAGTACCCAAGCTTCCTATCAATCTCACCAGCTTAGACATCTCAAAGAACAATTTATCCGGGCCTCTACCATCAGACATAGGAGCGTCAGCTCTAGCATCACTTGTTCTTTATGGCAACTCCCTTTCTGGTTCAATTCCATCTTATTTGTGCAAGATGCAGTCTCTGGAACTGTTGGATATATCAAGAAACAAGATAACTGGGCCACTTCCTGATTGCGCAATCAATTCAAGCTCAGCAAATTCCACATGTATGAATATTATCAATATAAGCTTGAGAAACAATAATATCTCTGGACAATTTCCTTCATTCTTTAAGAACTGCAAAAACCTTGTTTTTCTGGATCTTGCTGAAAATCAATTATCTGGGACACTGCCTACATGGATCGGGGGAAAATTACCTTCTTTGGTATTCTTACGGCTACGTTCTAATAGCTTTAGTGGTCATATTCCAATTGAACTTACCAGTCTGGCGGGTCTTCAATATTTAGACCTTGCACATAACAACTTTTCAGGATGCATACCGAATTCTTTGGCGAAATTTCATAGGATGACACTCGAACAAGATAAAGAAGACAGATTTTCAGGGGCTATTAGATATGGAATTGGGATCAATGATAATGACCTGGTTAATTATATTGAGAACATAACTGTAGTCACAAAAGGTCAAGAACGCCTATATACAGGTGAAATCGTATACATGGTGAACATTGATTTATCTAGTAACAATCTTACTGGAGAGATTCCTGAAGAGATTATCAGTCTTGTTGCGTTGACAAACCTGAACTTATCATGGAATAGCTTAAGTGGACAAATTCCTGAGAAGATTGGTTCCTTGTCACAATTGGAGTCCCTTGATTTGTCACACAATGTGCTTTCTGGTGGGATTCCCAGCAGTATAGCATCTCTTACCTACTTGAGCCACATGAATTTGTCGTACAACAATCTTTCTGGAAGAATTCCAGCAGGAAATCAACTCGACATTCTTGAAGACCCTGCATCTATGTATGTTGGAAACATCGATCTCTGTGGGCATCCTCTACCAAATAACTGCTCTATCAATGGTGATACTAAAATTGAACGAGATGACTTGGTCAACATGTCATTTCACTTCAGCATGATCATCGGTTTCATGGTTGGCCTCTTGCTAGTATTCTATTTTATGCTCTTCAGCAGAAGATGGAGAAATACTTGCTTTGTGTTTGTCGATGGCTTGTATGACAGAACGTATGTTCAAGTGGCCGTAACCTGCAGGAGGTTATGGAGGAGAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001277