BGIOSGA001307

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001307| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001307, complete gene.| tag = OsI_026...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001307

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001307, complete gene.

LocusTag

OsI_02646

Ensembl Transcript ID

BGIOSGA001307-TA

Ensembl Protein ID

BGIOSGA001307-PA

Length

3184

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25709270..25712453

Sequence Coding Region

25710081..25712453,25709270..25709755

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25709270..25712453 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25709270..25712453 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCGCAAGCTCCCGCCATTACCTCCCCTCACACTCCGCCGCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCGGCCTCTCCTCCACCGCCGCCACCTCGCCGTCTCCCTCCTCCGGTTCCGCTCCGTGACCTCCTCGCCCACCGCCTCCCGCCCACGCCCACGCCGGACCGGCCTCCTCTCTCGCGGCCGCATCCTCACGCAGACGTCCTCCTCCGCGGCCGACGCCCCGGCTGCGACGCCTCGCCGGAGAGCCTCCACCTCGAGATCGTCAAGAGGGGCCTCACCCATGACCTCTTCCTCGCCAACCACCTCGTCAACTCGTACGCCAAGGGCGCGCGCCTGGACGCGGCGCGCGGGGTGTTCGACGGAATGCCGAGCCGGAACGCCGTTTCTTGGACCTGCCTCATCTCCGGGCACGTGCTGTCCGGGCTCCCCGAGGATGCCTTCCCGCTGTTCCGCGCCATGCTGCGGGAGGGGCCGGGGTGCAGGCCTACGTCGTTCACCTTTGGCAGCGTGCTCCGGGCGTGCCAGGATTCCGGGCCGGACCGGCTGGGCTTCGCCGTGCAGGTCCATGGGTTGGTCTCTAAGACAGAGTTCACTTCAAACACCACGGTGTGCAATGCCCTGATCTCTATGTATGGCAGTTGCTCCGTTGGTCCGCCGATCCTGGCACAGCGTGTGTTTGATACCACTCCAGTCAGAGACTTGATCACATGGAACGCCTTGATGTCTGTGTATGCAAAGAAAGGGGATGCAATTTGTACGTTTACTCTGTTCAGGGCTATGCAGTATGATGATTCGGGGATCGAGTTGAGGCCGACAGAGCATACTTTTGGGAGCTTAATCACCGCGACATATCTTTCCTCATGCAGCTTGGGCCTGCTTGATCAATTGTTTGTGAGGGTGCTCAAATCTGGCTGCTCAAGTGACCTGTATGTGGGCAGTGCTCTAGTAAGTGCATTTGCGAGACATGGCATGCTTGATGAAGCAAAGGACATTTATCTCGGTCTGAAAGAGAGAAATGCAGTTACTTTGAATGGTCTGATAGCGGGTTTGGTCAAGCAGCAACATGGTGAAGCGGCAGCAGAGATTTTCATGGGAGCAAGGGATTCTGCTGCTGTCAACGTGGATACATATGTTGTGTTGCTTAGTGCAATAGCTGAGTTTTCTACAGCAGAACAAGGGTTGAGGAAAGGTAGGGAAGTCCACGCACATGTGCTCAGAGCTGGACATATTTATAGGAAAATTGCAGTTAGTAATGGTCTAGTTAATATGTATGCCAAGTGTGGTGCCATTGGTAAAGCATGTAGAGTTTTTCAGCTGATGGAAGCAAGGGATCGGATTTCATGGAATACCATTATCACTGCTCTTGATCAAAATGGATACTGTGAAGCAGCAATGATGAATTACTGTTTAATGAGACAAAATAGTATAGGTCCATCAAACTTTGCAGCAATTAGTGGCTTAAGTTCCTGTGCTGGTTTGGGACTTTTAGCTGCAGGCCAACAATTGCACTGTGATGCTGTAAAATGGGGACTATATTTAGATACCTCTATTTCAAATGCTCTTGTTAAAATGTATGGAGAATGTGGGCGGATGTCAGAATGCTGGGAAATTTTCAACTCTATGTCTGCACATGATGTAGTTTCTTGGAATTCTATCATGGGTGTTATGGCGAGTTCACAAGCACCTATTACTGAATCTGTACAAGTTTTCTCCAATATGATGAAGAGTGGTTTGGTCCCAAACAAAGTGACGTTTGTTAACTTTCTAGCTGCTTTGACTCCATTATCTGTTCTTGAACTTGGAAAGCAGATTCATTCTGTCATGCTGAAGCATGGAGTTACAGAAGATAATGCAGTAGATAATGCACTCATGTCATGCTATGCAAAGTCAGGAGATGTGGATTCCTGTGAGCGGCTGTTTTCTAGAATGTCTGGCAGACGGGATGCTATCTCATGGAATTCAATGATTTCAGGGTACATCTACAATGGACATCTGCAGGAAGCTATGGACTGTGTTTGGCTTATGATGCTTAGTGAACAAATGATGGATCACTGCACCTTCTCCATTGTACTGAATGCATGTGCTTCTGTGGCAGCATTGGAGCGTGGAATGGAGATGCATGCTTTTGGTTTAAGGTCACACTTGGAATCAGATGTTGTGGTCGAGAGTGCTCTTGTTGATATGTACTCCAAGTGTGGAAGGATAGACTATGCTTCAAAGGTATTTCATTCCATGAGTCAGAAAAATGAGTTCTCATGGAACTCCATGATTTCTGGTTATGCGAGACATGGTCTCGGAAGGAAAGCTTTGGAGATATTTGAGGAAATGCAAGAGAGCGGAGAAAGTCCAGACCATGTCACGTTTTTTCATGCAGCAATAGGAAGGTGGGAAGACACAGCCATAGCCCGGGCTGCAATGAAGGGAGCAGCAGTGAAAAAAGAGGCCGGTCGCAGTTGGGTAACCTTAACTGATGGAGTTCATACCTTCATTGCTGGTGACAGGTCACATCCAAACACCAAAGAAATCTATGAGAAGCTCAACTTTTTGATTCAGAAGATAAGGAATGCAGGTTATGTTCCACTGACAGAATATGTTTTACATGATCTTGAAGAAGAGAACAAAGAAGAACTGCTAAGATATCACAGTGAAAAGCTTGCGGTTGCTTTTGTTCTGACTCGTTCCTCCTCAGGTGGCCCCATAAGGATCATGAAGAACCTTCGGGTTTGCGGAGATTGCCATACAGCTTTCAGATACATTTCTCAGATTGTTGGTCGGCAAATCATTTTAAGGGATTCAATCCGATTTCATCATTTCAAGGATGGGAAATGTTCTTGTGGGGACTACTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MHRKLPPLPPLTLRRSSSSSSAAAAASPPPPPPRRLPPPVPLRDLLAHRLPPTPTPDRPPLSRPHPHADVLLRGRRPGCDASPESLHLEIVKRGLTHDLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVWLMMLSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFFHAAIGRWEDTAIARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW</aaseq>

Gene Sequence

<dnaseqindica>1..2373#2699..3184#ATGCACCGCAAGCTCCCGCCATTACCTCCCCTCACACTCCGCCGCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCGGCCTCTCCTCCACCGCCGCCACCTCGCCGTCTCCCTCCTCCGGTTCCGCTCCGTGACCTCCTCGCCCACCGCCTCCCGCCCACGCCCACGCCGGACCGGCCTCCTCTCTCGCGGCCGCATCCTCACGCAGACGTCCTCCTCCGCGGCCGACGCCCCGGCTGCGACGCCTCGCCGGAGAGCCTCCACCTCGAGATCGTCAAGAGGGGCCTCACCCATGACCTCTTCCTCGCCAACCACCTCGTCAACTCGTACGCCAAGGGCGCGCGCCTGGACGCGGCGCGCGGGGTGTTCGACGGAATGCCGAGCCGGAACGCCGTTTCTTGGACCTGCCTCATCTCCGGGCACGTGCTGTCCGGGCTCCCCGAGGATGCCTTCCCGCTGTTCCGCGCCATGCTGCGGGAGGGGCCGGGGTGCAGGCCTACGTCGTTCACCTTTGGCAGCGTGCTCCGGGCGTGCCAGGATTCCGGGCCGGACCGGCTGGGCTTCGCCGTGCAGGTCCATGGGTTGGTCTCTAAGACAGAGTTCACTTCAAACACCACGGTGTGCAATGCCCTGATCTCTATGTATGGCAGTTGCTCCGTTGGTCCGCCGATCCTGGCACAGCGTGTGTTTGATACCACTCCAGTCAGAGACTTGATCACATGGAACGCCTTGATGTCTGTGTATGCAAAGAAAGGGGATGCAATTTGTACGTTTACTCTGTTCAGGGCTATGCAGTATGATGATTCGGGGATCGAGTTGAGGCCGACAGAGCATACTTTTGGGAGCTTAATCACCGCGACATATCTTTCCTCATGCAGCTTGGGCCTGCTTGATCAATTGTTTGTGAGGGTGCTCAAATCTGGCTGCTCAAGTGACCTGTATGTGGGCAGTGCTCTAGTAAGTGCATTTGCGAGACATGGCATGCTTGATGAAGCAAAGGACATTTATCTCGGTCTGAAAGAGAGAAATGCAGTTACTTTGAATGGTCTGATAGCGGGTTTGGTCAAGCAGCAACATGGTGAAGCGGCAGCAGAGATTTTCATGGGAGCAAGGGATTCTGCTGCTGTCAACGTGGATACATATGTTGTGTTGCTTAGTGCAATAGCTGAGTTTTCTACAGCAGAACAAGGGTTGAGGAAAGGTAGGGAAGTCCACGCACATGTGCTCAGAGCTGGACATATTTATAGGAAAATTGCAGTTAGTAATGGTCTAGTTAATATGTATGCCAAGTGTGGTGCCATTGGTAAAGCATGTAGAGTTTTTCAGCTGATGGAAGCAAGGGATCGGATTTCATGGAATACCATTATCACTGCTCTTGATCAAAATGGATACTGTGAAGCAGCAATGATGAATTACTGTTTAATGAGACAAAATAGTATAGGTCCATCAAACTTTGCAGCAATTAGTGGCTTAAGTTCCTGTGCTGGTTTGGGACTTTTAGCTGCAGGCCAACAATTGCACTGTGATGCTGTAAAATGGGGACTATATTTAGATACCTCTATTTCAAATGCTCTTGTTAAAATGTATGGAGAATGTGGGCGGATGTCAGAATGCTGGGAAATTTTCAACTCTATGTCTGCACATGATGTAGTTTCTTGGAATTCTATCATGGGTGTTATGGCGAGTTCACAAGCACCTATTACTGAATCTGTACAAGTTTTCTCCAATATGATGAAGAGTGGTTTGGTCCCAAACAAAGTGACGTTTGTTAACTTTCTAGCTGCTTTGACTCCATTATCTGTTCTTGAACTTGGAAAGCAGATTCATTCTGTCATGCTGAAGCATGGAGTTACAGAAGATAATGCAGTAGATAATGCACTCATGTCATGCTATGCAAAGTCAGGAGATGTGGATTCCTGTGAGCGGCTGTTTTCTAGAATGTCTGGCAGACGGGATGCTATCTCATGGAATTCAATGATTTCAGGGTACATCTACAATGGACATCTGCAGGAAGCTATGGACTGTGTTTGGCTTATGATGCTTAGTGAACAAATGATGGATCACTGCACCTTCTCCATTGTACTGAATGCATGTGCTTCTGTGGCAGCATTGGAGCGTGGAATGGAGATGCATGCTTTTGGTTTAAGGTCACACTTGGAATCAGATGTTGTGGTCGAGAGTGCTCTTGTTGATATGTACTCCAAGTGTGGAAGGATAGACTATGCTTCAAAGGTATTTCATTCCATGAGTCAGAAAAATGAGTTCTCATGGAACTCCATGATTTCTGGTTATGCGAGACATGGTCTCGGAAGGAAAGCTTTGGAGATATTTGAGGAAATGCAAGAGAGCGGAGAAAGTCCAGACCATGTCACGTTTGTGAGTGTTTTGTCTGCCTGTAGTCACGCTGGTTTAGTTGAAAGAGGCCTTGACTACTTTGAATTGATGGAGGATTATGGTATATTACCTCGGATTGAGCATTATTCTTGTGTTATAGACCTTCTTGGTCGAGCTGGGGAGCTTCATTAGATACAGGAGTACATGTAAAGAATGCCTATGAAACCGAATACTCTCATATGGAGGACGGTATTAGTTGCTTGTCTCAGTCAATCCCAGGGCTAAGATAGATCTGGGAACAGAAGCTTCAAGGATGCTTTTGGAATTAGAACCTCGAAATCCTGTAAATTATGTTCTTTCATCTAAGTTTCATGCAGCAATAGGAAGGTGGGAAGACACAGCCATAGCCCGGGCTGCAATGAAGGGAGCAGCAGTGAAAAAAGAGGCCGGTCGCAGTTGGGTAACCTTAACTGATGGAGTTCATACCTTCATTGCTGGTGACAGGTCACATCCAAACACCAAAGAAATCTATGAGAAGCTCAACTTTTTGATTCAGAAGATAAGGAATGCAGGTTATGTTCCACTGACAGAATATGTTTTACATGATCTTGAAGAAGAGAACAAAGAAGAACTGCTAAGATATCACAGTGAAAAGCTTGCGGTTGCTTTTGTTCTGACTCGTTCCTCCTCAGGTGGCCCCATAAGGATCATGAAGAACCTTCGGGTTTGCGGAGATTGCCATACAGCTTTCAGATACATTTCTCAGATTGTTGGTCGGCAAATCATTTTAAGGGATTCAATCCGATTTCATCATTTCAAGGATGGGAAATGTTCTTGTGGGGACTACTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001307