BGIOSGA001313

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001313| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001313, complete gene.| tag = OsI_026...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001313

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001313, complete gene.

LocusTag

OsI_02634

Ensembl Transcript ID

BGIOSGA001313-TA

Ensembl Protein ID

BGIOSGA001313-PA

Length

2613

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25656198..25658810

Sequence Coding Region

25658217..25658810,25657823..25657894,25657565..25657645,25657003..25657100,25656722..25656847
,25656515..25656563,25656198..25656404

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25656198..25658810 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25656198..25658810 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGTGGCGGCGGCGGCGCCACGCGGTCTCCTCTTCCCCATCTCGCCTTCACCCTCGCAGCCGCGGCGTGTGCCAGCCTTGGCGAGAGCTGGACGGAGCCAGAGGCGGCATGCGGCGCTGGCGAGGCCCGCGCGCCGCCACCTCGACGAGGCGATGTCCGCCGGGTTCGTCCGCAGCCTCAACGCCCCGCCTGACGAGGACGGCGCGGGCTCCGGCGGGAGGTACGACCCCAGGCCGGGGGACTTCGCCGTCGGGGTGGTGGTCTCCGGCACCGAGGCGCGCCTCGACGTCGCCGTGGGCGCCGACCGCCTCGCCACGCTCCTCGCCAAGGAGCTCCTCCCGCTCTACCGCGCCGACCTCCCGGCCTTCGCTGAGGCGGCTCCGCCTCGGCCGGGGAGCGTGGGTGTCGTGGCGAGCCCCGCCTCGGGCGAGGGGGACCGGAAGCCGGGGGAGCGCGGCGGGGGCAGGACGCTGGTGCCGCCCGGCACGGTGGTGTTCGCGGAGGTGCTCGGCCGCACGCTGAGCGGCCGGCCGCTGCTGTCGGCGAGGCGACTCTTCCGCCGCCTCGCCTGGCACCGCGCCAGGCAGGGGCTGAGAGCATTCCTTCCTAAGTTTGAGCTCATGGACAGGATAAATACGTTTTCAGACTTGAAAAACAAAGTTGGTTGCAGCATACGTGTGTGCATTACAAGGCTTGATGAAGAAACTAATGACCTAATAATTAGCGAAAAGAAAGCATGGGAAATGACATATCTTAAAGAAGGAACTCTTCTTCAAGGGATCGTTCGCAAGATTTTTCCATATGGTGCTCAGATTAGAATAGCTGGGACAAACAGAAGTGGATTGTTGCATATTTCAAATATTAGTCGAGGGAGTGTCTTGTCAGTAAGTGACATCCTAAAGATAGATGATGAGGTAAAAGTTCTGGTGGTCAAGTCAAATGTTCCAGATAAAATCGCGCTTAGCATATCTGACCTCGAAAGTACACCTGGTCTATTTCTTTCAGACAAAGCGAGAGTGTTCTCAGAAGCTGAGGAAATGGCAGGGAGGTACCGGGAGCAGCTTCCAGCTGACTCTAAGAACGCTAAATTAGATGCTGACCTTCCAGGAGGAACAATTCCATTTGATGATGAAGCTACATTATACGCAAACTGGAAATGGTTTAAATTTTTGGAAGATGGCAAACTAGGTGCTGTAACAACAGAACACAATGGCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVAAAAPRGLLFPISPSPSQPRRVPALARAGRSQRRHAALARPARRHLDEAMSAGFVRSLNAPPDEDGAGSGGRYDPRPGDFAVGVVVSGTEARLDVAVGADRLATLLAKELLPLYRADLPAFAEAAPPRPGSVGVVASPASGEGDRKPGERGGGRTLVPPGTVVFAEVLGRTLSGRPLLSARRLFRRLAWHRARQGLRAFLPKFELMDRINTFSDLKNKVGCSIRVCITRLDEETNDLIISEKKAWEMTYLKEGTLLQGIVRKIFPYGAQIRIAGTNRSGLLHISNISRGSVLSVSDILKIDDEVKVLVVKSNVPDKIALSISDLESTPGLFLSDKARVFSEAEEMAGRYREQLPADSKNAKLDADLPGGTIPFDDEATLYANWKWFKFLEDGKLGAVTTEHNGS</aaseq>

Gene Sequence

<dnaseqindica>1..594#917..988#1166..1246#1711..1808#1964..2089#2248..2296#2407..2613#ATGGCGGCGGTGGCGGCGGCGGCGCCACGCGGTCTCCTCTTCCCCATCTCGCCTTCACCCTCGCAGCCGCGGCGTGTGCCAGCCTTGGCGAGAGCTGGACGGAGCCAGAGGCGGCATGCGGCGCTGGCGAGGCCCGCGCGCCGCCACCTCGACGAGGCGATGTCCGCCGGGTTCGTCCGCAGCCTCAACGCCCCGCCTGACGAGGACGGCGCGGGCTCCGGCGGGAGGTACGACCCCAGGCCGGGGGACTTCGCCGTCGGGGTGGTGGTCTCCGGCACCGAGGCGCGCCTCGACGTCGCCGTGGGCGCCGACCGCCTCGCCACGCTCCTCGCCAAGGAGCTCCTCCCGCTCTACCGCGCCGACCTCCCGGCCTTCGCTGAGGCGGCTCCGCCTCGGCCGGGGAGCGTGGGTGTCGTGGCGAGCCCCGCCTCGGGCGAGGGGGACCGGAAGCCGGGGGAGCGCGGCGGGGGCAGGACGCTGGTGCCGCCCGGCACGGTGGTGTTCGCGGAGGTGCTCGGCCGCACGCTGAGCGGCCGGCCGCTGCTGTCGGCGAGGCGACTCTTCCGCCGCCTCGCCTGGCACCGCGCCAGGCAGGTTGAGTCATCGTCACTGTACCCCTTCTTCCATTCGGCATTGCTGTTGCTGAGTTCAAATCTTCGCAGCATACATGTACACAGTTCTGGGAAATTATTGGGGATTGCAAACTGATGCGGTAATTTGTACGTTTTGTCAGGCAGATTATGCAGCTTGACGAGCCAATTGAGGTCAAAATTTACGAGTGGAACACTGGGGGCCTCCTCACAAGAATTGAGGCAAGGAAGGGATGCCTTTGTTGCTGACTTGCTCTCTCTAATCTTCAAGAGACGTGGTGTTTTCGTTTGAGCAAACTAACTTTTACATCGACTTCATTTTTCAGGGGCTGAGAGCATTCCTTCCTAAGTTTGAGCTCATGGACAGGATAAATACGTTTTCAGACTTGAAAAACAAAGTAAATGAACTTACGACGGTTTACTGCTCATCAATGTGCAAATTGTTATTACCTTCTAATGCTTGGCTACTATGCATTACTCATAGTTGAAATGCAGCATGCCTGCATGGTGTAATAAGTTAAACTCGCACATCTTAGTTTGTCTGGGTTGAAGTAACCGATTGCTTGTTCTCGCAGGTTGGTTGCAGCATACGTGTGTGCATTACAAGGCTTGATGAAGAAACTAATGACCTAATAATTAGCGAAAAGAAAGCATGGGTTAGTACCCTGGCATATTATCTATATGTTTTGTTTGTAACTGTACAGATATAGAACTGTAAATTTTTAGTTATAATTACTAGAGTACTACATATTTGAAATTAGGTACGATCTAATATGGTGGCATTATTTAAATCTTGAGTTTAAAAAGTACCTGGTGTACTTCACTACTCCATTGCCCTTGAGGCCTAGACTAATTGAAACTCTGCCCGGTGCCATTGTTCTGTCACCAATTATCATGTCCAATCAATTTCGTATGATTTCATTTTCAATGCTAAAATCAGTTCCACATGCTCTGAACTTTCATGCCCTCTGAAACATTGATTAGTTTTCCTGTTATATGTAATGCATAAATGAATATAGCAAGTTTGTTTCCTTCTTATTGCAAATGCTATTAGCATAGTTAGAGATATAGTAACAAGATACTTAGATATATACCAATATATTCAACTCTCGATCATCAGGAAATGACATATCTTAAAGAAGGAACTCTTCTTCAAGGGATCGTTCGCAAGATTTTTCCATATGGTGCTCAGATTAGAATAGCTGGGACAAACAGAAGGTATGCTTGGGGCCTTCACAATGCAGCCTGTGTAGCCCTTTTTATATTTGGTGCATCATTTATTCGATGGACTACAATAAGAAAAATCATCTTCTTTTATTTTGCTAAAATGGTAAGGAAAGAAAATAATAGTGTATTCAATTACTCATATGCAGTGGATTGTTGCATATTTCAAATATTAGTCGAGGGAGTGTCTTGTCAGTAAGTGACATCCTAAAGATAGATGATGAGGTAAAAGTTCTGGTGGTCAAGTCAAATGTTCCAGATAAAATCGCGCTTAGGTAATCACTGACTCACTTTGTATTGGATCTATTCTGTTGTCAGTTAACATAAAAATTGTTCTGATTGTCCCAGTTTACTGAATACTCTATTACATTGAGGTTTGTTTTTCATCAGTTATGGTAGAACACTGAATTGAAGTTTGATTTTGCTACAACAGCATATCTGACCTCGAAAGTACACCTGGTCTATTTCTTTCAGACAAAGCGGTAAGATATTGATTTGAAGTTTGATCTTGTTCTATACTCAATATCTTCTATAACAAATTTTACCTCGTATTTGCATTTCTCAGTACCTTTTTGTCTTGTGCTGTTTTCAGAGAGTGTTCTCAGAAGCTGAGGAAATGGCAGGGAGGTACCGGGAGCAGCTTCCAGCTGACTCTAAGAACGCTAAATTAGATGCTGACCTTCCAGGAGGAACAATTCCATTTGATGATGAAGCTACATTATACGCAAACTGGAAATGGTTTAAATTTTTGGAAGATGGCAAACTAGGTGCTGTAACAACAGAACACAATGGCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001313