BGIOSGA001315

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001315| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001315, complete gene.| tag = P0700A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001315

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001315, complete gene.

LocusTag

P0700A11.27

Ensembl Transcript ID

BGIOSGA001315-TA

Ensembl Protein ID

BGIOSGA001315-PA

Length

4273

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25580566..25584838

Sequence Coding Region

25584601..25584838,25582790..25583127,25582559..25582694,25581884..25582020,25581672..25581795
,25580566..25581077

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25580566..25584838 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25580566..25584838 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGGAAGGGGGCGGGGGAGATGGTGCTGCAGGAGGAGGAGGAGGACGCGGCGCCCGCGATGGGGTGCTGGATCCGCATCCCGCGCCGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTCGACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGAAAGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCCACAACATCCAGTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAACTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTCCGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAGGAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTTAACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGCAGAAGTTGATTTTCTTGGAAACCTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTGCTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGGTCTTTACCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTTTTAGACGCGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAGGGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCAGAGTATGTCATGACAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTACTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGACCCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACGGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGCACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTCTCCTATGGCCCGCACGCCTCCCCTTACCGGCAGTCCCCAAGGCCCAACAACGGCAAACTGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MGKEGKRREEEGRRRRKGKGKGAGEMVLQEEEEDAAPAMGCWIRIPRRLGGGCMSSRSKVDSSTTTSGGGGGGSARVGGESKSANDGCRDHSVQPMASGSTTSSNTGSISPSSIVGEELKLAFQLRRFTFNELKCATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWVAEVDFLGNLQHPHLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWAIRMRIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMSGRRSMDKNRPNGEHNLVEWARPYLGERRRFYRLVDPRLEGNFSIRGAQKTAQLACACLNRDPKARPLMSQVVEVLKPLLNLKDMASSSYFFQSMQQERAASLGNPIGSQSMKAQGTFARNGQQPMRSLSYGPHASPYRQSPRPNNGKLQ</aaseq>

Gene Sequence

<dnaseqindica>1..238#1712..2049#2145..2280#2819..2955#3044..3167#3762..4273#ATGGGGAAGGAGGGGAAGCGGCGGGAGGAGGAGGGGAGGCGGAGGAGGAAGGGGAAGGGGAAGGGGGCGGGGGAGATGGTGCTGCAGGAGGAGGAGGAGGACGCGGCGCCCGCGATGGGGTGCTGGATCCGCATCCCGCGCCGGCTCGGCGGCGGCTGCATGTCGTCGCGCTCCAAGGTCGACTCCTCCACCACCACCAGCGGCGGCGGCGGCGGCGGCAGCGCTCGCGTCGGCGGCGGTAATCTCTCCCATCCTCTCCCGCACTCGCTTGTACTACTTGCTTGCTTCCCTCGTGTTCCGCTCTTCGTTTTCGGCGCATGCTTTTGCGTCGGTCGCTCGGGGTGGCGGCGCCACGCGTGCACGGGCGCGAGAGAATTGTACGCTAGCGCCGCATGAGATGAGATGGCGCCATGGCTGCTGGCGGAAGCTTTGTTTTCTAGTAGTATTTTCTGTTTTTATCCTTTTTTATTTTTAGAAGTAATGTTTGATTGTGATGGGAGCATTCTATGATGAAAAAAATGGATGTGTGTTGGTGTGATCCGAGAGAGGAGAGGAGAGGGCTTTGGTGGGTGGTACGAATTCAAGAGCGTGAGTTGGATAGAGTGGTTGGTGTGTGTGTGTGGGGTGTGTGTGGCATACTGGCATAGGATGGGAATGGGACGGGACGGGATGGCCTCCGCTTCATTCACGTACGGGTATTAGATTAATGAGATTGATGATGGGAGCTGTGTGCTGTCCTGCTGTGCTGTTGTGTACGAGTCTGCAGGGTCTGTGGCTTTGGAGTGCTGCCATTGGTGTTCGAGTTGCTCGTGCTTTGTGCTCCTGGTTGTAGGGCTTTGTGGCTTGCTAGTGCCAGGGGATTCTGTAGTGGATGTCCTCTGGATGAAGCTGTTGTAGTATGGGGAAGATATGTAGTGACGGTTTGGTTGCTGTGAGATGAGTAGAACACCTGTGGTTGGCGGGAGGCGAGCAGATTAGATTCAGTACTTTCAATTCTTTTCAGTTTGTGTTTGTAGATGCTTATATTTTATTGGTGTGTGGGTTGCATGGAGGTTTGCATATTTGGCTATAATTAGATAATGCATGCGCTGAATACCGACAAACGTGTGTGTATGAGTGAAGTGAAACGCTCAATAGGGAAATGCTAACTTGACTTAATATACTTGGTCGCTCCAGTTTGCACTTAACACTCTAGCAGGCCACATGGATAGTTGGAGCTTTGGCTGAATATGGCATTCATGTCCAGCTCTGTTGGAGTAAAAGGAGTGGTCATTTTCTACTCCTCTGTCCACAAATGTATTAATTTGTTCTGGTAGTGCCTTTTCTTACATTACATTGTTTGGGAACCAAAATTGGGAAGAAAAAAAACTGGTCTATCTTGATGTAAGCTGACTTACCTGCTTTTGTTGGGAAAGAAGCCTTTTCTTTCTTTTTAATCTTTAATCTTCATATAGATAATCTTCGACCCAACCGTTTGAAACGTAGAAAGGGAAAAAAAAAACTCTGAACAAATCATACAGTGTGGGACATAGCATAAAATACATCCCAACAAACCCTCTAGAACTTGCTAAATATTTCTGCTGCAACCGTCTCAGGTTGTCATCTTCTGCTAAGAACCAAGTCCTTTTCCTGTTGAGTTATTTTAGGATATTATGTTAATGATATAAGCTTTTTAGTTATTCCCCTAACAAGGATTATGTTTCATGTGCAGAAAGCAAATCAGCGAATGATGGTTGTCGAGACCATTCAGTTCAACCAATGGCCTCTGGTTCCACAACATCCAGTAACACTGGAAGCATCTCACCTTCGTCCATAGTCGGAGAGGAACTTAAACTAGCTTTCCAACTCCGTAGGTTTACATTTAATGAACTTAAGTGTGCCACAAGAAACTTCCGGCCTGAGAGTCTCCTTGGTGAAGGAGGTTTTGGCTGTGTCTTTAAAGGTTGGATTGAGGAGAACGGAACTGCTCCCGTAAAACCTGGCACAGGATTAACGGTTGCTGTCAAGACACTTAACCATGATGGGCTGCAGGGCCATAAAGAGTGGGTGGTATGTTTTGAATTGCTTCAGCATACAGACCACAAAATATTATTCAACTGTCTTCTAATGCATCATCAATTAAACTAGCGTTATTTCATTTTCAGGCAGAAGTTGATTTTCTTGGAAACCTTCAACATCCACACCTAGTGAAATTGGTTGGTTACTGCATCGAAGATGACCAAAGGTTGCTAGTGTATGAATTTATGCCTCGTGGAAGCTTGGAGAACCATCTTTTTAGGAGTAAGAATCTTTGCGTCCTACTGTCAGTCATTTTTTTCTTCCCATTTGTTGCCAACAGTTTGGAGTTCTTTCATTGTTCACGGTAGCAGTTTTTATTGTAGTTCCTGCATTTTTATATGCACTTTTCTATATTGTACTCTGCTCTAGTGATGTAGTTGATTATTTATTTTATTCATATTTTGTAGCAATTCTGTTGTACTGTATACTTGAATGTCTGACAGTTTGGCATTTAAGAGTTCATTAAGAAATGGCTGACACCTTACTAACTGTTCATTACGATTTCTGGCAGTCAATAAGGGTGTTAGGTGGTGCTATGTTACATGTTTCCAATTCCAAATGATGTATTTTTGGTGTTTTATTATTACCGACTAAATACCTTGGGTGCAACTCTTTGTGCTCCTCCTTTAGACAATGTAGTTTATGCACTGTTATTGCTGTGTTGCGTTAAATTTGGCCCAACTGTTTCATTTCAGTATAACTCTATTCTGAAGTGTCTTGTATTTATCTGATATTTGTCTTGGATAATTGTATTAAACAGGGTCTTTACCTCTCCCATGGGCCATCAGAATGAGAATAGCACTTGGTGCTGCTAAGGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGGCCAGTTATCTATCGGGATTTCAAAACTTCAAATATTCTTTTAGACGCGGTATGCAACCATGTTTGAGAATCAAAACATATTAGATATGTTCATTTAGATTGTAACATTCTCATATTTCTTAAATATTCATTTTCAGGACTACAATGCAAAACTCTCTGATTTTGGACTAGCTAAAGATGGCCCTGAGGGTGATAAAACACATGTATCTACTCGAGTCATGGGAACTTATGGATATGCAGCTCCAGAGTATGTCATGACAGGTGAGTTGATCATTACTTTGTTAGTTGGCTTGCTTGAGTAATTTTGAAATATTGCATCATGCTGCTGAACCTCTATCCAAACTTGCACATGTAGTAAAATCTTTCATGGCACATTATATTTCCTTTGACAAATTTCCTAGATAGCCCTTCAGTAGAAACTTTCAGTGACTTGACATAGATGAAATCTGTGTACAAGGATGTGTGCATGGAGTGTTTTATTATAGCCTGCACCTTTTTTGGTCACATTCACAATGATCTGGGTGCTATCATGGCACACCATCTTAATTTTCTGTGATTACTGATATTTAAGGCACTCCATGTGCTGCTGTGGTGGTGCAATAGCTGTTTATCTGAATCTCTCTCTCTGAGGCAGTCCAAAAGAATCATAATTGCACTGGCTCAAAATTATGTTGCCCATTTTGATTTGATGAGCTTTGAACTTCCATTGACTGATCTAAGCTGAATGAATGTACTCATATATCACAGTACCGTACATAATTTGCTATTTATTCACTTGTTTGAGAATTAAACTGCACCACATTCACTTGGTATATTGCAGTGTTCCACCACTTTATCAGTTCATTTCTTTCTCAGGTCACTTGACATCAAAGAGTGACGTGTACAGCTTTGGAGTGGTGCTACTGGAGATGATGTCAGGCAGAAGGTCAATGGACAAGAATAGGCCAAACGGTGAACACAACCTGGTTGAATGGGCGCGTCCTTATCTTGGAGAAAGACGGCGATTCTATAGGCTTGTAGACCCCCGTCTGGAGGGGAACTTCTCCATAAGAGGCGCTCAGAAGACGGCTCAGCTGGCCTGTGCCTGCCTTAACCGGGATCCCAAGGCCAGGCCTCTCATGAGTCAAGTGGTCGAAGTCCTCAAGCCCCTCCTGAACCTCAAAGACATGGCCAGCTCCTCATACTTCTTCCAATCCATGCAGCAGGAGCGTGCCGCAAGCCTCGGCAACCCAATTGGCAGCCAAAGCATGAAGGCACAGGGCACCTTCGCGCGCAACGGGCAGCAGCCAATGAGGAGCCTCTCCTATGGCCCGCACGCCTCCCCTTACCGGCAGTCCCCAAGGCCCAACAACGGCAAACTGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001315