BGIOSGA001334

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Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001334, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA001334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001334, complete gene.

LocusTag

OSJNBB0024F06.13

Ensembl Transcript ID

BGIOSGA001334-TA

Ensembl Protein ID

BGIOSGA001334-PA

Length

3796

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25196985..25200780

Sequence Coding Region

25200678..25200780,25200006..25200565,25199653..25199792,25199400..25199517,25199231..25199323
,25199092..25199148,25198831..25198992,25198605..25198748,25198299..25198505
,25198074..25198211,25197921..25197991,25197731..25197797,25197538..25197651
,25197366..25197446,25197184..25197281,25196985..25197099

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25196985..25200780 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25196985..25200780 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGAGATCGGAGTAGGAGGAGCGCCGCCGCGATCACGCGGCCGCCGTCGCACGGCGGCCCGGCGTGGCGGCGGATGATCGCCTGGATTCAACTACTCAAGGTGTTCGTCCAGAGGTACGGGGAGGTGGCGAGGTGGCGCACGGCGTTCCTCCTCTTCCTGGCGCTCCTGGCGGAGCGGGGCCTGCGCCGCGCCTACCTGTCGTGGAAGGAGTCGCGGCTGCGGCCGCGCGCCGCCGCCGCCGTCACCCTGCAGGCCGCGTTCCGGGGGATGGCCGCCCGCCGCGAGCTCTCCCTCCGGCGCAGGGCCGCACGAGCCGCAGCCGCCGCGCTCATCCAGGCGCGGTGGCGCGCGCGCGCGGCGGCGCGGGAGCACGCGGCGGCCGTGATCTGCCAGTGCGCCTGGAGGCGCCGCGCCGCGCGGCGGCGGCTCGCGAGGCTCCGGATCGAGCAGGAGAGGGCGGCGGAGGCGTGCAGGCTCAGGGAGATGGTGGACGTGCTCCAGCAGGCGGTGGAGGACGCGGAGGTGCGGGTGATCGCCGAGCGGGAGGCGGCCAAGAAGGCCATCGCCGAGGCGCCGCCGGTGATCAAGGAGATCGTCGTGCAGGTCGTGGACACCGACAAGGTGGACTCGCTCGCCGCCGAAGTCGCCCGCCTCAAGGATTTGCTGGGAGCAGAGATGAAGGCGACGTTTGACGCGAAGAAGGCGGTCGCCGAAGCCGAGCTGAGGAACGAGAAGCTGGCTAGGTTGCTCGGAGTCGAGGAGGTGAAGAACAGGCAGCTGCAAGAATCCCTGAAAAGGATGGAGATGAAGGCATCTGATCTTGAGGAAGAAAACCAGAAGCTTCGAGGAGCTGTCGCGTCAGTCCCTTATGTCAGGTTGCCGTCAAACGTAAACCGTGATGATCCTGATCTTGAGCCAACTCCAGAGAATGAGGACGAGAATGAGAATGAGAAAGCAGTTTATTGTGAGGTGAAGCCAATGATAGTGGATAGAGGGGTTGACATCCATGAGAACAATTCTCAACTGCCTGGCCTGAATGATCCTGAAGCTGAGAAGCAGCAGCAGGAGCTGTTGATCAAGTGCATATCTGAAGATCTTGGGTTCTCTATTGGAAGGCCTATTGCCGCATACCTCATCTACCGATGCCTGATCCACTGGAAATCATTTGAAGAGGACAGGACAACAGTTTTTGATCGCATTATTCAGAAGATTAGTTCTGCAATTGAGGCTCGAGACAACAATGAGACATTAGCATATTGGCTATCCAATTCATGCACACTGCTGCTGCTTCTCCAAAAAACACTGAAAATCAACGGGGCAGCTGCTTTGGCTCGTCAGAGGCGAAGAGCATCACCCCTGAAGACGCCACAGGAAAATCAAGCACCTAATCATCCTGACCGTAGTCCAGTTCCTGATGGACGGTTAGTCGGTGGACTAGGTGAAGTTTGCCAGGTTGAAGCCAAGTATCCAGCTCTTGCTTTCAAGCAGCAGCTCACTGCATTGCTGGAGAAGGTCTATGGAATTATCAGGCACAATTTGAAGAAGGAACTGTCCCCACTGCTTGGTCTCTGTATTCAGGCACCAAGAACATTTGTTGTAAGCCCCAGAGGGTCAGGCGCTCAAGGAACAGACTTGGCACAGCAAGCTTCTATGGCACATTGGCAGAGCATCATCAAAATTCTTACAAATTCGCTGAATGTCCTAAAATCCAATTATGTGCCTCCCTTCCTAATCTGCAAGCTGTTCACCCAACTATTTTCATTCATCAATGTTCAACTCTTCAACAGTAATGGAGAGTATGTTAAAGCTGGGTTGGATGAGCTAGAGCACTGGTGCTTTTGGCTGACTGAAGAGTATGCAGGTTCTTCCTGGGACGAACTGAAGCATATTAGGCAGGCCGTAGCACTTCTGATACTTGAAGAGAAGCACAGCAAGTCTCTCAAAGAAATCACTGATGAGTACTGCCCAGCACTTAGCATGCAGCAGCTATACAGAATCAGCACAATGTATTGCGACGACAAGTATGGAACTCTGGGTATTCCTCCAGAAGTGGTTTCGAGCATGAGAACCAAGATGGTCCAGCAGGGATCGAACAGTCCATCGACACAAGATGACATCAATTCCTTCCTGTTAGATGACGATTTCAGTATACCGTTCTCCATCGATGACATTGCAAAGCTGATGGTTCACATCGACATAGCAGATATGGATCTGCCACCCCTGATTCAGGAGAACAAGGGCTCTCCACATCTGATGCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MDGDRSRRSAAAITRPPSHGGPAWRRMIAWIQLLKVFVQRYGEVARWRTAFLLFLALLAERGLRRAYLSWKESRLRPRAAAAVTLQAAFRGMAARRELSLRRRAARAAAAALIQARWRARAAAREHAAAVICQCAWRRRAARRRLARLRIEQERAAEACRLREMVDVLQQAVEDAEVRVIAEREAAKKAIAEAPPVIKEIVVQVVDTDKVDSLAAEVARLKDLLGAEMKATFDAKKAVAEAELRNEKLARLLGVEEVKNRQLQESLKRMEMKASDLEEENQKLRGAVASVPYVRLPSNVNRDDPDLEPTPENEDENENEKAVYCEVKPMIVDRGVDIHENNSQLPGLNDPEAEKQQQELLIKCISEDLGFSIGRPIAAYLIYRCLIHWKSFEEDRTTVFDRIIQKISSAIEARDNNETLAYWLSNSCTLLLLLQKTLKINGAAALARQRRRASPLKTPQENQAPNHPDRSPVPDGRLVGGLGEVCQVEAKYPALAFKQQLTALLEKVYGIIRHNLKKELSPLLGLCIQAPRTFVVSPRGSGAQGTDLAQQASMAHWQSIIKILTNSLNVLKSNYVPPFLICKLFTQLFSFINVQLFNSNGEYVKAGLDELEHWCFWLTEEYAGSSWDELKHIRQAVALLILEEKHSKSLKEITDEYCPALSMQQLYRISTMYCDDKYGTLGIPPEVVSSMRTKMVQQGSNSPSTQDDINSFLLDDDFSIPFSIDDIAKLMVHIDIADMDLPPLIQENKGSPHLMP</aaseq>

Gene Sequence

<dnaseqindica>1..103#216..775#989..1128#1264..1381#1458..1550#1633..1689#1789..1950#2033..2176#2276..2482#2570..2707#2790..2860#2984..3050#3130..3243#3335..3415#3500..3597#3682..3796#ATGGATGGAGATCGGAGTAGGAGGAGCGCCGCCGCGATCACGCGGCCGCCGTCGCACGGCGGCCCGGCGTGGCGGCGGATGATCGCCTGGATTCAACTACTCAGTGAGTGATCTCTCCACCTTCTTGCTCGCGCGGCGATCCATCCATGGATCCTAGCTGCAGAAAATCCGAGCTCACTCTGACTTCTCTCGATCGATCGCCGGATGTGTCGCAGAGGTGTTCGTCCAGAGGTACGGGGAGGTGGCGAGGTGGCGCACGGCGTTCCTCCTCTTCCTGGCGCTCCTGGCGGAGCGGGGCCTGCGCCGCGCCTACCTGTCGTGGAAGGAGTCGCGGCTGCGGCCGCGCGCCGCCGCCGCCGTCACCCTGCAGGCCGCGTTCCGGGGGATGGCCGCCCGCCGCGAGCTCTCCCTCCGGCGCAGGGCCGCACGAGCCGCAGCCGCCGCGCTCATCCAGGCGCGGTGGCGCGCGCGCGCGGCGGCGCGGGAGCACGCGGCGGCCGTGATCTGCCAGTGCGCCTGGAGGCGCCGCGCCGCGCGGCGGCGGCTCGCGAGGCTCCGGATCGAGCAGGAGAGGGCGGCGGAGGCGTGCAGGCTCAGGGAGATGGTGGACGTGCTCCAGCAGGCGGTGGAGGACGCGGAGGTGCGGGTGATCGCCGAGCGGGAGGCGGCCAAGAAGGCCATCGCCGAGGCGCCGCCGGTGATCAAGGAGATCGTCGTGCAGGTCGTGGACACCGACAAGGTGGACTCGCTCGCCGCCGAAGTCGCCCGCCTCAAGGTGACACCATCGATGCCTCTAAATGTGCAATTTATTCATGTGATCCATGAACAAAATTCAGATCAAAGAAATCGGTCTGATTCATATGATCCATGAACAAATTCAGATTAAAGAAAGTGATCTGATTCATGTGATCCATGAACAAATTCAGCTGAAAGAAAGATGCAGTGACCAACCAAACCAGATGCTACATTTTGACATTTCGAGTTGCAGGATTTGCTGGGAGCAGAGATGAAGGCGACGTTTGACGCGAAGAAGGCGGTCGCCGAAGCCGAGCTGAGGAACGAGAAGCTGGCTAGGTTGCTCGGAGTCGAGGAGGTGAAGAACAGGCAGCTGCAAGAATCCCTGAAAAGGTTCAGTATTTCAGAATTCAGACTTGTTAGCTCTGAATCTCTGATGTGCCTGCACAATTAATGTGTGATCCCAGTATGCGAGTTCATGGGAGAACTCATAGTGTTTTGCATGGATTTTTATTTATTTTTACTTAGGATGGAGATGAAGGCATCTGATCTTGAGGAAGAAAACCAGAAGCTTCGAGGAGCTGTCGCGTCAGTCCCTTATGTCAGGTTGCCGTCAAACGTAAACCGTGATGATCCTGATCTTGAGGTACCTGAAATCACATTGATGAATTTCGACGCACAATTTTGATGCTCAGCGTGCTCAATCATGTGCATCTTAACAGCCAACTCCAGAGAATGAGGACGAGAATGAGAATGAGAAAGCAGTTTATTGTGAGGTGAAGCCAATGATAGTGGATAGAGGGGTTGACATCCATGTAAGTATAATCATTAAATTATATTTGATCAGTATATTCGTAGAATGAGTTCCTGATTTAACAACATTTAATTTCAATCTAGGAGAACAATTCTCAACTGCCTGGCCTGAATGATCCTGAAGCTGAGAAGCAGCAGCAGGTATGATGCTTAGTAATTCTGAACTTCTGTTTGTGTTTCAAGCAGTATCACAATTTCGTTCAGGTGTCACGCCTTAAACGTTTTTTTCTGAATATCCAGGAGCTGTTGATCAAGTGCATATCTGAAGATCTTGGGTTCTCTATTGGAAGGCCTATTGCCGCATACCTCATCTACCGATGCCTGATCCACTGGAAATCATTTGAAGAGGACAGGACAACAGTTTTTGATCGCATTATTCAGAAGATTAGTTCTGCAATTGAGGTATGTGGCAGTGGTATGCACATATCTGCAACTATTATTCATAAGAAGATATATGCATCAATTGTTTGTTTTCTCTTGCAAGGCTCGAGACAACAATGAGACATTAGCATATTGGCTATCCAATTCATGCACACTGCTGCTGCTTCTCCAAAAAACACTGAAAATCAACGGGGCAGCTGCTTTGGCTCGTCAGAGGCGAAGAGCATCACCCCTGAAGACGCCACAGGTAATGTACCGAAAACTAAACTCTGTATGCTCAACAACCTAAGTGATTTTGTAAGTGAGTTTGGGATTCTGGACTCAATATTAGTTGCAAAAATTCCAGGAAAATCAAGCACCTAATCATCCTGACCGTAGTCCAGTTCCTGATGGACGGTTAGTCGGTGGACTAGGTGAAGTTTGCCAGGTTGAAGCCAAGTATCCAGCTCTTGCTTTCAAGCAGCAGCTCACTGCATTGCTGGAGAAGGTCTATGGAATTATCAGGCACAATTTGAAGAAGGAACTGTCCCCACTGCTTGGTCTCTGTATTCAGGTAGCATTGTGCTTTCTGCATATCTTTCTTTCAGTTTCAAAAGTATATTTGCTGAAAGTTAAGAATGACGGATATAATTTTCTCTAGGCACCAAGAACATTTGTTGTAAGCCCCAGAGGGTCAGGCGCTCAAGGAACAGACTTGGCACAGCAAGCTTCTATGGCACATTGGCAGAGCATCATCAAAATTCTTACAAATTCGCTGAATGTCCTAAAATCCAATTATGTAAGATAAAAAAAAATTAAATTGGCAGTAGATACAATTTTAATTCAAGTATACACGCCATCTAAACCTCTTTACATTGCAGGTGCCTCCCTTCCTAATCTGCAAGCTGTTCACCCAACTATTTTCATTCATCAATGTTCAACTCTTCAACAGGTACACATGCATACTAACGATTCACTTCTCCATATTTCTCAAACTAGCACCATGAACTCATATGACAAATTTTTATCACTTCAATGGTAGTCTTCTGCTACGGCGTGAATGCTGTTCATTCAGTAATGGAGAGTATGTTAAAGCTGGGTTGGATGAGCTAGAGCACTGGTGCTTTTGGCTGACTGAAGAGGTTAAAAACTTAAAAAAGTCTTTACGTTGTCTGAACAAGTCTTTCAGGAAGCAGTCTCTAACCTTCATGTGAAAAACAGTATGCAGGTTCTTCCTGGGACGAACTGAAGCATATTAGGCAGGCCGTAGCACTTCTGATACTTGAAGAGAAGCACAGCAAGTCTCTCAAAGAAATCACTGATGAGTACTGCCCAGTAAGATTTTGACTTTATCTACACTACCTGCTTTGCTAATCTCATTATGTCAATAACAAAATTGGATGATGCATTCTATCCTGGCAAACAGGCACTTAGCATGCAGCAGCTATACAGAATCAGCACAATGTATTGCGACGACAAGTATGGAACTCTGGGTATTCCTCCAGAAGTATGTGATTCCAATACATTCCTGACAAGAACTTTTACAAGATTCATCTTCTTCACCTCGTGGACTAAACAATCTAAACTGCAGGTGGTTTCGAGCATGAGAACCAAGATGGTCCAGCAGGGATCGAACAGTCCATCGACACAAGATGACATCAATTCCTTCCTGTTAGATGACGATTTCAGGTACAGTACATTTTTCCCCTTTGTTTCCTTGACTACCATCTCGGTCACCTGATGATCTGATCCATTTCCGATTTCTTGTTGCAGTATACCGTTCTCCATCGATGACATTGCAAAGCTGATGGTTCACATCGACATAGCAGATATGGATCTGCCACCCCTGATTCAGGAGAACAAGGGCTCTCCACATCTGATGCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001334

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001334&oldid=39058"