BGIOSGA001336

From RiceWiki
Revision as of 10:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001336| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001336, complete gene.| tag = OsI_025...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001336

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001336, complete gene.

LocusTag

OsI_02583

Ensembl Transcript ID

BGIOSGA001336-TA

Ensembl Protein ID

BGIOSGA001336-PA

Length

1232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25140818..25142049

Sequence Coding Region

25141681..25142049,25141443..25141607,25140818..25141150

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25140818..25142049 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25140818..25142049 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGCCTACGCGGTGCTGGCGCGCGGCATGGCGAGGGAGCTCGTCGTGCCGCACGACCTATGCGCGGTGGTGAGCTGGGCCACGACACTCGTCCACGCCCGCCTCGGGCCTCGCCCGGCGGAGCGCCGCATCGCCATCATCAACCGCGTCGATGAGGACGGCCGCCACGACAGCTGCTTCGCGGACGCCCACGCGTACCTCGCCACCAAGATCGATCCCCGTGCCCTGGGCCGGTTCCGCCTCAGCGGCGTCGGGGGCGGGGGCGAGCGCGGCCGATGGAATTCGCTGTCCATGGTGCCGGCTACTCGATGTCCGACGTCTTCGAGGGCGTGGAGTTTAGGTGGACTTCCGTCCCCGCGGAAGGCGGCGTGGCGGCGGGAGCGCGAGCTCAAGATCTACATGAACGAGAGCTGGTCGTGGCGCGGCATCGTCCACCACCACCCCGCCACGTTCGACACGGTCGCCATGGACCCGGGGCTGAAGCGATCCATCGTCGCCGACCTCGACCCGGGGCAGGGCGTGGAAGCGAGGATTGAGCAGCAGAGCCTGACGCTGTCCGGGCTGCTCAACTTCATCGACGGGCTGTGGTCGACGAGCGGCGAGGAGCGGGTGGTCGTCTTCACTCTTCACCACCAACTACAAGGAACGCCTCGACGCGGCGCTGCTCCGGCCGGGGCGGATGGACATGCATGCTCGCCGGCGTGGACGCCACGCCGGCCGAGGTGTCGGAGATGCTGCTGCGCAGCTAGCGACGACGTCGACGCCGCGCTCAGGGCCCTCGTGGAGTTCCTCCAGGAGAAGAAGCGAGCCATGTGTCGATCGCATCAAGAACAGTCAAGTTTGAAAGTCCAATCCTTAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MTAYAVLARGMARELVVPHDLCAVVSWATTLVHARLGPRPAERRIAIINRVDEDGRHDSCFADAHAYLATKIDPRALGRFRLSGVGGGGERGRWNSLSMVPATRCPTSSRAWSLGGLPSPRKAAWRRERELKIYMNESWSWRGIVHHHPATFDTVAMDPGLKRSIVADLDPGQGVEARIEQQSLTLSGLLNFIDGLWSTSGEERVVVFTLHHQLQGTPRRGAAPAGADGHACSPAWTPRRPRCRRCCCAASDDVDAALRALVEFLQEKKRAMCRSHQEQSSLKVQSLR</aaseq>

Gene Sequence

<dnaseqindica>1..369#443..607#900..1232#ATGACCGCCTACGCGGTGCTGGCGCGCGGCATGGCGAGGGAGCTCGTCGTGCCGCACGACCTATGCGCGGTGGTGAGCTGGGCCACGACACTCGTCCACGCCCGCCTCGGGCCTCGCCCGGCGGAGCGCCGCATCGCCATCATCAACCGCGTCGATGAGGACGGCCGCCACGACAGCTGCTTCGCGGACGCCCACGCGTACCTCGCCACCAAGATCGATCCCCGTGCCCTGGGCCGGTTCCGCCTCAGCGGCGTCGGGGGCGGGGGCGAGCGCGGCCGATGGAATTCGCTGTCCATGGTGCCGGCTACTCGATGTCCGACGTCTTCGAGGGCGTGGAGTTTAGGTGGACTTCCGTCCCCGCGGAAGGCGGTGGGAGGTTGCGCGAATCGTGGTCGCTGGAGCTCAGCTTCGACGCGGAGCACACGGACATGGCGCTGGGCAGGCGTGGCGGCGGGAGCGCGAGCTCAAGATCTACATGAACGAGAGCTGGTCGTGGCGCGGCATCGTCCACCACCACCCCGCCACGTTCGACACGGTCGCCATGGACCCGGGGCTGAAGCGATCCATCGTCGCCGACCTCGACCCGGGGCAGGGCGTGGAAGCGAGGGTACCTCCTCTACGGCCCGCCCGGGACAGGCAAGTCCAGCCTCGTCGCCGCCATTGCCAACCACCTCCGCTTCAACCTCTACGACCTCGACCTCTTCCAGGTGCACGACAACTCTGTTCTCCATCCTCGTCGTCGAGGACATCGATTGCTGCTTCACCTCCAGGTCGAGGGAAGACGATGGCAAAGAGCACAACATGATTTGTCAGACAAGATACAACTGCCACATCCGACCAATAACGCAATCTTTCTTGTTCTTGATCGAATATTATTATTGTTTTTTTTGTGATTTCAGATTGAGCAGCAGAGCCTGACGCTGTCCGGGCTGCTCAACTTCATCGACGGGCTGTGGTCGACGAGCGGCGAGGAGCGGGTGGTCGTCTTCACTCTTCACCACCAACTACAAGGAACGCCTCGACGCGGCGCTGCTCCGGCCGGGGCGGATGGACATGCATGCTCGCCGGCGTGGACGCCACGCCGGCCGAGGTGTCGGAGATGCTGCTGCGCAGCTAGCGACGACGTCGACGCCGCGCTCAGGGCCCTCGTGGAGTTCCTCCAGGAGAAGAAGCGAGCCATGTGTCGATCGCATCAAGAACAGTCAAGTTTGAAAGTCCAATCCTTAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001336