BGIOSGA001417

From RiceWiki
Revision as of 10:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001417| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001417, complete gene.| tag = OS01G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001417

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001417, complete gene.

LocusTag

OS01G0558600

Ensembl Transcript ID

BGIOSGA001417-TA

Ensembl Protein ID

BGIOSGA001417-PA

Length

2462

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23420169..23422630

Sequence Coding Region

23422617..23422630,23422091..23422163,23421207..23421254,23421066..23421113,23420906..23420977
,23420663..23420818,23420453..23420556,23420169..23420262

Genome Context

<gbrowseImage1> name=IndicaChromosome01:23420169..23422630 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:23420169..23422630 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATCCCGAGTATGACTACCTCTTCAAGCTTCTGCTCATCGGAGACTCGGGCGTCGGGAAGTCTTGCCTGCTTCTGAGGTTTGCGGACGATTCATATCTGGAGAGCTATATCAGTACCATCGGTGTTGATTTTAAAATCCGCACTGTTGAGCAAGATGGGAAGACAATAAAGCTGCAAATTTGGGATACTGCTGGCCAAGAGCGATTTAGGACCATTACAAGCAGCTACTACCGTGGTGCCCACGGGATCATTGTTGTTTATGATGTGACTGATCAGGAGAGCTTCAACAATGTCAAGCAGTGGCTGAATGAAATTGATAGGTATGCTAGTGAAAATGTGAACAAGCTCTTGGTGGGGAACAAGTGTGATCTAGCTGAGAACAGAGTGGTTTCTTATGAGGCTGGCAAGGCCCTTGCTGATGAGATTGGAATACCATTCCTGGAGACCAGTGCGAAGGATGCAACAAATGTGGAGAAGGCATTCATGACCATGGCAGGAGAGATAAAGAACAGGATGGCAAGCCAACCGGCTACAAATGCAAGCAAGCCTGCAACCGTGCAAATGCGAGGCCAACCTGTTGCCCAGCAAAGCAGCTGCTGCTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVAQQSSCCS</aaseq>

Gene Sequence

<dnaseqindica>1..14#468..540#1377..1424#1518..1565#1654..1725#1813..1968#2075..2178#2369..2462#ATGAATCCCGAGTAGTAAGTCTCCCCTTCTTCTTCTTCTTCTTCTTCTCCTGTAGTTCCGTCTGGAGTATTCGCTGTCGGCGGCGGTGGGTGGAGTCGGGGTCGAGCGGAGCGAAGCGCGCGGACCCGATCTCGCCGTCGAGCCGCCGATTCGCCTCCCCGAGCCGTGGATTCCGGCGGCGGCGCTAGTCCGCCCCCCCGCTTGCTTCTCGTTGAACGGGGTTGCTTGTGGAGGTGGGTGGTGGTAGTTAGTCGTTACCTGTCGTCTGGTCCCCGCCTCCCCCACGCCGGGAGGGCGGGAGGGAGTAGCAGATTCTCTCGGATGCGCTTTTCCGCGCTTCGTCCGCCATGAGTGTTTCTATTGCTTCGTTGGGGGTTTGTTGCGTGCCGTTGGCTGCTTGGCTTGCTGTGGTGCACTTACTGATTTGATGTGATGTGCTGTGATGTGATGCTTGGGTGATTCTGCAGTGACTACCTCTTCAAGCTTCTGCTCATCGGAGACTCGGGCGTCGGGAAGTCTTGCCTGCTTCTGAGGTTTGCGGTGAGGATCGCTTCCTTACCCTGTATTGAGATTTCTTTTTTTTTCTTTTTAGATTATAATTTAAGGTTTTGTTTATTTGAATGCATCTCGTATGGCAAGTCCCCGGGCAAAGTGGCCAGAAGCCTGTGAACTTTCAAGACACCAATTTAGTTCATTGGAAAGATAAGAGGATACTTAAAATTTGACTAGAGAGTATCACCTAATTGGTTTTATTCAAGGCATATGTATGATGCATGTTTGCGAATAATGACTTGGCATCGGCAACGGTGACAAAGTAGACATTGATTGCTTTATTGCTTGGGGTATGTTCATTGATCCAAGATAAAAACAATGCCGTGGGAGATTTGTAATGGACTTGAATTTGCATGACAAGTTCCTCCGTAGGGTGCCCTGATAATGTTATTTGCTGTTTGGCCAATGATAAAATCTTACGTAGAATCATAGAAATAATCATAAGAGTTTATCTGAATTTTGTTCTGCTTTGGGTAGTTTCCGTGAACAATTTGGAAAAAAGATTGAGGTGTTTTGGTCATTTTGTCAAGGTCTGTGGCATCTCAAGTTACTATACTTTCGGGACAAGCTTGTCGATACTGATTTAGTTAGTAGTAGTGACTCGCCTAAAACGAGTTAAGATCTGGAGAGTTTCTGTTTTCAATGTCCTCATTTTCCAACATTACATCTGACAGAAATGCAACCAGTAATGATGATCAAGTGGGAGAGCGTTTACTTCTAGAATCATGTGCTATGGCAGCTGTATTCATAGTCTGCATCATATTTTTGTTTGGTAGCTCCTCCTGGCCTTGATTAAAGGATCTATCTTCTCATTTCTTTTGCAGGACGATTCATATCTGGAGAGCTATATCAGTACCATCGGTGTTGATTTTGTAAGTTCAATTTTTCCATGTGCATAAGTTTGCACAAATGAGCCTTTTTTTTTTCTCCTTAATAGCCTTTTCACTCCATGTTTGACCTGCTAGAAAATCCGCACTGTTGAGCAAGATGGGAAGACAATAAAGCTGCAAATTGTAAGTAAACCATTCTAGTGAAGGCTGTAACATTTTTCCAGACTGCTAAGAAACTTCAGCTCTGATATGTCAACTTGTTCTCCTTCAGTGGGATACTGCTGGCCAAGAGCGATTTAGGACCATTACAAGCAGCTACTACCGTGGTGCCCACGGGATCATTGTGAGCACTCTTCACATATGTCACTATCCATCTCCCATGGATTAATATTACCCCGTGCTTGCTAATTATGTAATGTATGTTATGTAGGTTGTTTATGATGTGACTGATCAGGAGAGCTTCAACAATGTCAAGCAGTGGCTGAATGAAATTGATAGGTATGCTAGTGAAAATGTGAACAAGCTCTTGGTGGGGAACAAGTGTGATCTAGCTGAGAACAGAGTGGTTTCTTATGAGGCTGGCAAGGTATTTTTTTGCTTTGTGTTTCCATTACCCTCGCATAAATATCTTTTGACTTCCTTGTGGATTATACCTTGTTCAACTGGCATACATATGTTTTAATCATTGACAGGCCCTTGCTGATGAGATTGGAATACCATTCCTGGAGACCAGTGCGAAGGATGCAACAAATGTGGAGAAGGCATTCATGACCATGGCAGGAGAGATAAAGAACAGGTGACATTCCCTCTAGATATTTGAAGGCTTATTCTAGGAAATTGCTATTTTGTGCTTAATCATCATGACCTCCTGATATATAGTTACATAAGGAAAGAATTCATAGAAATGAACATACTATTGCTGGACCATCATTATTGGTATTAGCATTCACTTGCATTACCTGACACCTTGTTCTTTGTTTGAATAGGATGGCAAGCCAACCGGCTACAAATGCAAGCAAGCCTGCAACCGTGCAAATGCGAGGCCAACCTGTTGCCCAGCAAAGCAGCTGCTGCTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001417