BGIOSGA001454

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Revision as of 10:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001454| Description = BGIOSGA001454| Definition = Oryza sativa Indica Group BGIOSGA001454, complete gene.| tag = | tid = BGIOSGA001454-TA|...")
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Gene Name

BGIOSGA001454

Description

BGIOSGA001454

Definition

Oryza sativa Indica Group BGIOSGA001454, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA001454-TA

Ensembl Protein ID

BGIOSGA001454-PA

Length

4614

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22659587..22664200

Sequence Coding Region

22664085..22664200,22662757..22663006,22662516..22662674,22661900..22662051,22661703..22661779
,22661113..22661218,22660125..22660184,22659587..22659689

Genome Context

<gbrowseImage1> name=IndicaChromosome01:22659587..22664200 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:22659587..22664200 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATACTGACCAAGGTTGCTTTTAGCCAAGGCACAAGTACATATGTTCTTGTTTTCCACAGAAATATAATAGCTGCAGTAGTCTTACTGCCTGTTGCTTTGGCAGTAGAAAGGATGGAGTCCTTGAACTTGAAGAGGATCAATGGAATTGCAAAAGTTTCTGGTGTAGTGTTGTGCATTGTTGGTGTCATCATACTTGCGTTCTACCAAGGACCTGAGTTGAAATCATTCAACCATCACCATCTTTTTCGCACGAGTACTGTCTATGCTGCGGCTACTTCACATCCTGCAACGACATGGATATTAGGAATTTTTCTGACGACTTTATCAACAACATGTTGGGCACTTTGGACAGTGCTTCAGGNTCCTATGTTGGAGGTATACCCCTCTAAGCTCCTCAACACAACCATCCAGATAGTCTTTGCAACTATTCAGTGTTTCTTCATCGCTCTGGCGATTGAGAGGGATTTTTCACGATGGAAGCTGCACCTGGATATGGGCCTTATTGCTGTGATCTACTCAGGGGTACTTGTCTCGGGAGTTGCATATTACATGCAAGTATGGGTTATTGACAAGAGTGGGCCGGTCTTTTTGGCCATGACAATGCCCATAACTCTTCTTGTCACAATAATGCTGTCCTCATTTGTATTAGGAGAAGCAGTCACCCTGGGAAGCATAATAAGCGGAGTGGTAATGGTTGGTGGTCTTTATTGTGTTCTTTGGGCCAAGAAAAGTGAACAGGCAGCTATCATAGTGCCAAAACTTGACCCAAGCTTCGGCACTCATAAAATTTTGGTAGCACATTCGAAGCAAAACAGCCCTACATCTAGTCTCATATATGCAGAGATCCAATCCAGCCCTGAAGAGGGAGAGAAACGCCGCTTGATATGCGTGCCCTCCCGCCTAAAAAGCGCACTGACGCTGCCCACTGGCTGCAGTGCCAGATCTGGTCTTAGCAACTCCAACAAACCTTTTGCACTGCCATCCCATCTCACACCATTGGCGCATCATTTCATGTAA</cdnaseq>

Protein Sequence

<aaseq>MQILTKVAFSQGTSTYVLVFHRNIIAAVVLLPVALAVERMESLNLKRINGIAKVSGVVLCIVGVIILAFYQGPELKSFNHHHLFRTSTVYAAATSHPATTWILGIFLTTLSTTCWALWTVLQXPMLEVYPSKLLNTTIQIVFATIQCFFIALAIERDFSRWKLHLDMGLIAVIYSGVLVSGVAYYMQVWVIDKSGPVFLAMTMPITLLVTIMLSSFVLGEAVTLGSIISGVVMVGGLYCVLWAKKSEQAAIIVPKLDPSFGTHKILVAHSKQNSPTSSLIYAEIQSSPEEGEKRRLICVPSRLKSALTLPTGCSARSGLSNSNKPFALPSHLTPLAHHFM</aaseq>

Gene Sequence

<dnaseqindica>1..116#1195..1444#1527..1685#2150..2301#2422..2498#2983..3088#4017..4076#4512..4614#ATGCAGATACTGACCAAGGTTGCTTTTAGCCAAGGCACAAGTACATATGTTCTTGTTTTCCACAGAAATATAATAGCTGCAGTAGTCTTACTGCCTGTTGCTTTGGCAGTAGAAAGGTAAGCATATTTTCTTGCAATTTTCCCTTGATAAGTGGATATCATCTTGGAAGCGTGTATGCGCATTTTCTTGTAATTTTCCCTTGATAAGTGGATATTTTCTTGGAAGCGTATATTGAGTCATTGATGTTTATTTTTACAGGAAAACTGCTCCACCACTGACATTCAAAGTGTCTCTGAAACTATTTTTGCATGCATTATATGGGTAGGTCAAATTGTGATATATATTGTTGTTTACTTGGTTTCTTATTGACCGGAATCTTCACGGTTATCGACCAAAAACGTTGGTTGCAACTAGTTTTCAGACTCTTGATATCAAGTTGGATAGGTTTCAGAATTTCCATCTTGACAGTTCTTGTATATCGAAACATCTCTGTATGAAGTTAACTACTTTGCATCTTGGAAGTTCTTGCATAACATTGCACTTCTGTGCAAAGTTCTTTAGTTTTCCTGTTCAGTTATTTGACCATCTCTCTCTCTCTCTTGGTTAAAAGTGCAGTTTATATTGTTATTTTTGTCTTTTCTTGGTCATAGTCTTGTAAACATGTATATTCCATCTCTCTTTTCTAGTATACGCTTTGTGTTATACTTTATTAGCTTTGCTAATGACGATCCAGTGTTAAGATGCTCCATTGGTTCAATTTTTAGAAGTTCATATAGAAGTTGCTGAAAGGACTAGTTTCCTGACTGCTTTGTTCTGTTTGTAAATGTCAACTATTTTCAGTTAATCATGTTTGTCAATTTCATCATTTTGCTTACAGCACAGCCACTAACAACTTTATATGTATTTCACTTTCTTATTAGGATTTCTGGGGCGATAAACATATATAGCCTTGGTCTCAGTTATGCCTCAGCAACATCATCATCTGCGATATTTAACCTTCTACCGGCGGTGGCTTTCATCTTGGCTCTTCTGATGAAGTAGGTATTTCATTTTTACACCACTAAGGCACTAACATGCTTTAATAAAATTCGTAAATGATTTGACAAAATGAGATTACGAGATTACATTATGCATTCCTTTCACAACCTAAGTAGGTTGGCAAGATTAAAAAAAATTTGGGATTTCTCCTTGTAGGATGGAGTCCTTGAACTTGAAGAGGATCAATGGAATTGCAAAAGTTTCTGGTGTAGTGTTGTGCATTGTTGGTGTCATCATACTTGCGTTCTACCAAGGACCTGAGTTGAAATCATTCAACCATCACCATCTTTTTCGCACGAGTACTGTCTATGCTGCGGCTACTTCACATCCTGCAACGACATGGATATTAGGAATTTTTCTGACGACTTTATCAACAACATGTTGGGCACTTTGGACAGTGCTTCAGGTATGAATACTTAAAAGATGTTACTCTAGGCTTGTCCATGATAATTGCATTTAACTATATAGTAACCTGTACTGCTTCTCAGGNTCCTATGTTGGAGGTATACCCCTCTAAGCTCCTCAACACAACCATCCAGATAGTCTTTGCAACTATTCAGTGTTTCTTCATCGCTCTGGCGATTGAGAGGGATTTTTCACGATGGAAGCTGCACCTGGATATGGGCCTTATTGCTGTGATCTACTCAGTAAGTTCAATATCCCCCAGCTTTTGCCTATTTTGGTCCAACAATGGTTAGTTTAGTGGTTTTAGCTTTTCATATTGTCATTAGAGTACTAGTAAAAAAAAAATTCTTCCTTGTGATGAATTTGATAGGATTTTTTGCGATTCCACGAAAAACAGCAGTGAAAATGCCAATAAAGCAAGTACTAGTACCTGCTGGATTTTGATGAATAGGGTACTTACATTCTTATTGCATTTTCCTGTGTTCTCCCTGCCACTCATCACACATTTTCTACATTTTTCATGTTTCTATATTTTCTGTGTTTCAAATCATATCCTTGTTTCACTTGCATTGACATGTTTTCTGCTATGTTCCTTGTTTACCAGTTACCACATTATGAAGTGGACCTAGGTAGTTAGAATACTTTTAATGCAGAAAGGGGAAAATTGCTGAAATTTCTGCTGAATCACTCTGAATACAATGTGCAGGGGGTACTTGTCTCGGGAGTTGCATATTACATGCAAGTATGGGTTATTGACAAGAGTGGGCCGGTCTTTTTGGCCATGACAATGCCCATAACTCTTCTTGTCACAATAATGCTGTCCTCATTTGTATTAGGAGAAGCAGTCACCCTGGGAAGGTATTGCCTCTCTTTCTAGGTTTCTTCTGATCATCTCATGTCTTCATGTATTCTTTTATCTTATATTAAATGCAAATAACTTCATGGCTTTCATGATGAATTTGGTTTTTCTACCTGCAGCATAATAAGCGGAGTGGTAATGGTTGGTGGTCTTTATTGTGTTCTTTGGGCCAAGAAAAGTGAACAGGCAGCTATCAGTAAGCAACAGATGGTAGTTCCAGTCCAGACAACACGAGTTTAGGCCCAGTCTCAATGGTCAGTGTAGTACTAGCTCCCAGTGTTCTGAAATAATTAGTTTGTATGTAGAGTTTTCCCTGTATTGTTCAAAGGATCATGGGCTGGATTCTAGTTAGCTATATTTAGTTCTACAATATTTCGCAAACAAAAAAAAATGATGACCTGTCCTCCTATAGATATGGATAAGGCAGTTGTGCACTAGCAAATCCAAATTTTGTGTTAAAAGGGGACATAGTGAGACTATGGGCTCTTGGGAGGGTCGAATGGGCTTTTGGGACTTGAGACTATGGGCTGTTTTGGATTGCTACACTACCAAAATGTTGGTATAGCCAAAACTTTGGTAAGTAGCAAACAACAGTCTATAAAAAAAATTGCATTTCCAAAATTTTGGCTCTACCTTTCTATCCATTTCATATTCATATTATTATCCGATCAAAAATTTAGTAGTGCCAAAACTTGACCCAAGCTTCGGCACTCATAAAATTTTGGTAGCACATTCGAAGCAAAACAGCCCTACATCTAGTCTCATATATGCAGAGATCCAATCCAGGTCAGCAATGACATCATTATTGTTCAAGGCCTGTATTTCAATACTGTCTTCAAGATCCACGATCAAATATCTGATATTATATGATTTATTTAACTGAGGAAAATACATTATCAGTCCTTATACTTTTCATCAGATGTTTGTAAAAATAACATGACATCACAAGCCTTGGGATCATATTAGCATAATTTGATCTGTGTCCAGCAAAAATAAATATGAACAGAGCTTGCGCCTTTCATAACCAAGCTTCTTTCTTGTCCTATCTTTCTTTTTTGAGCAAATATCAGAGAACCCCGTGGACATGGGCTTTTGTAACAAAAACCCCTATGTATAAGCTATAAGTTTCAAAGTACCCCAGGTAGATGAACCAAGCTTCAAAAACCCCCGTATTTAGTCACACCATACCAAATATTTCATAGTGTAAATCCAAAACTTGCAGGGGCTGCTGCATGCCATCAAAGCAGTTTTTCCTGATTGTGCCCAGAGGTACTGCAAGAGACATTGATTCAGTGCAAGGGGACGAGGACGTGCAAGGAGAGGAGGAGGTGTAAGGGGAAGAGGGCGTGCAATGCATTGATTCAGTGCTGATCAAGGATGCGATGCTAGTGCAATATGAAGAATAGAATGAAAGACTAAGTTTTTATTATTTTGCAATAAGACTATAGATGAACCATCACACTTAACCATGTACATTAGATGTGGTTAATCAGCGATGTCCACCAAAAATTACATGTTATATGCAAGTTATAGCAAATATTTTGTAATTAAGGGTAAGCCAGAAACCTTCTAAATGATTGGATTGAAGTAATTAAATCCTGTTCTTGTCAGACCAATGTTCAAAGTTTGCGATAATTGCCATCTTATTTTGGACGTTCTTCTTGCTCTATGTGCTGATTTGCTTTAGTGATGATTCTTGCCTTCTCTATTTCAGCCCTGAAGAGGGAGAGAAACGCCGCTTGATATGCGTGCCCTCCCGCCTAAAAAGCGCACTGTAAGCGCCTTCCCGCGCTCGCTCCCCACCCCTGCCACACCAGCAGACCACGTAGCAGCTGCAAGTGGGCTAATAGCCACGTTAACAAGCCCATTAGACAAAAACTGATTAAATATGGGGGTTTTTGAAGCCTGGTTCATTTGCCTGGGGTACTTTGAAACTTATAGCTTAGACATGGGGGTTTTCGTTACAAAGGCCCATGTACATGGGGTTTTCTTATATTTGCTCTTCTTTTTTCTATATATATAATTTTGATTTTCTACTTTATAGTTGACCGATCAGAGGACCATCTATTTTAGAACTTGCATAGATTTAGACTTCTCTTTTTCTTTTTAAATGAACAGTGTAAGGTTTCATATTGATATAGCACAAAAAATTTTTACAGGAGTACCATCACATCATAGTACAGGGCACTGCACTGTTGCAACCTTGCAGGACGCTGCCCACTGGCTGCAGTGCCAGATCTGGTCTTAGCAACTCCAACAAACCTTTTGCACTGCCATCCCATCTCACACCATTGGCGCATCATTTCATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001454

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001454&oldid=39178"