BGIOSGA001603

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Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001603| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001603, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA001603

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001603, complete gene.

LocusTag

OSJNBA0091E23.18-1

Ensembl Transcript ID

BGIOSGA001603-TA

Ensembl Protein ID

BGIOSGA001603-PA

Length

4981

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17624219..17629199

Sequence Coding Region

17628951..17629199,17628435..17628653,17627902..17627988,17626834..17626980,17624528..17624623
,17624219..17624419

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17624219..17629199 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17624219..17629199 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAGGCTGGGAAGGGCGCCCTGCTGCTACTGCTTCACCGAGCCGCACCCCGCCGCCGTCAGGCTGCGAGTGCTGCCGCCTGCCCGCGCCGCGAATACCTCCTCAGAGCCGGCGGCGCGGCTGAGGGCGGTTCTCGAGCAGGTGGACGAGGAGCTGCGGAAGGGGAACGACGAGGCCGCGCTGTCCCTCGTGCGCGGCTCGCAGGGGGCGGATGGCGGGCTCCGATTCTTTGGCGCGGCGAGGCAGGTACCTCAAAGACTTTATACATTGGATGAGCTGAAGTTAAATGGGATCGATACTTCTGCTTTCCTATCTCCTGTTGATCTGACTTTGGGATCAATTGAGAGAAATCTCCAAATTGCTGCAGTTCTAGGAGGGCTCTCTGTATCAGCTGCATTTGAGCTTTCTCAACTCCAAGTTCTGTTTCTGTTTTTGGGTCTACTATCTCTGTGGTCGGTGGATTTGGTATATTTCGGTGGTGGAGTGAGAAACTTGATTCTTGATACAATTGGTCACAATCTTAGCCAGAAGTATCGTAATAGAGTTATTCAGCACGAAGCTGGCCACTTCTTGATAGCGTATTTGCTTGGGGTCCTTCCCAAAGGATACAGTATCACAAGTTTAGATACATTCATAAAAAAGGGCTCACTGAATGTGCAAGCTGGGACAGCTTTTGTTGACTTTGAGTTCCTTCAAGAGATGTTGAACAAGTTCTCATGCATTGCCTTGGCTGGAGTAGCAACAGAGTATCTTTTGTATGGATATGCTGAAGGCGGACTAGCTGACATTGGGCAACTAGATGGATTGCTCAAAGGTCTAGGTTTCACCCAGAAGAAAGCTGATTCACAGGTGAGATGGGCTGTGCTGAATACTGTACTTGCACTGCGTCGCCATAAAAAGGCCAGATCACAGCTCGCGGAGGCAATGTCCTCTGGGAAGTCAGTTGGATCTTGCATCGGGGTCATAGAAGAGAATATAAACTCTGAGGATATTTAG</cdnaseq>

Protein Sequence

<aaseq>MMRLGRAPCCYCFTEPHPAAVRLRVLPPARAANTSSEPAARLRAVLEQVDEELRKGNDEAALSLVRGSQGADGGLRFFGAARQVPQRLYTLDELKLNGIDTSAFLSPVDLTLGSIERNLQIAAVLGGLSVSAAFELSQLQVLFLFLGLLSLWSVDLVYFGGGVRNLILDTIGHNLSQKYRNRVIQHEAGHFLIAYLLGVLPKGYSITSLDTFIKKGSLNVQAGTAFVDFEFLQEMLNKFSCIALAGVATEYLLYGYAEGGLADIGQLDGLLKGLGFTQKKADSQVRWAVLNTVLALRRHKKARSQLAEAMSSGKSVGSCIGVIEENINSEDI</aaseq>

Gene Sequence

<dnaseqindica>1..249#547..765#1212..1298#2220..2366#4577..4672#4781..4981#ATGATGAGGCTGGGAAGGGCGCCCTGCTGCTACTGCTTCACCGAGCCGCACCCCGCCGCCGTCAGGCTGCGAGTGCTGCCGCCTGCCCGCGCCGCGAATACCTCCTCAGAGCCGGCGGCGCGGCTGAGGGCGGTTCTCGAGCAGGTGGACGAGGAGCTGCGGAAGGGGAACGACGAGGCCGCGCTGTCCCTCGTGCGCGGCTCGCAGGGGGCGGATGGCGGGCTCCGATTCTTTGGCGCGGCGAGGCAGGTTGGCTTTTGTTGTCATGTAAATATTTGTCCTGATGATGTCTCGCGATTATTAGCAGCTGTGATGATGATGCATTCACCCGCTCTGCTTTCGTTCTTAGATTGGAGCATTTTTATGTGCATCTTAAACTGATTTGGCAAAGAATTCATGATCCGAGAGGGCGATAGGATATATTTAGTGCTGCTTTCAACTAATGCTATTCATAATTTTGCCTAAATAAAATGAAGCTTTAGCCTTTTCCTTTTCTCTACATTTTGATCTAGGTAGTCATTTTTTTTCTACTGAAATCTATATCAGGTACCTCAAAGACTTTATACATTGGATGAGCTGAAGTTAAATGGGATCGATACTTCTGCTTTCCTATCTCCTGTTGATCTGACTTTGGGATCAATTGAGAGAAATCTCCAAATTGCTGCAGTTCTAGGAGGGCTCTCTGTATCAGCTGCATTTGAGCTTTCTCAACTCCAAGTTCTGTTTCTGTTTTTGGGTCTACTATCTCTGTGGTCGGTGGATTTGGTTAGTTACATCATAATGATTCTTTCCAATCATCTAAATAAATTTTCATCATTATATGGCCTTTTAGATCGTCGACTTTATGACTTGTAGCTGTTGATCTACTGATTTATTCAAGTCCATGTTATGGTTAAAAAATCTCCATTGCTAATTTATTCAAGGAGTATTTAATCATCTGTAACTGTGGAAATATGAAGTCTAACATATTGTTCCATTCATACAGTAATGTGCTTTCAATCGATGATCTTGAGCTTTTCTATAATCTCTAACTGAAAAATCTTAGTATTACTTGCATACACTTCTTAGAACTCTAATTCATTTTTTTTCTTGAGCTCATTTCATGTACCCAAAAAATTAATTGTCTATTAATGTCATCTTATCATTTGTCCCATGTCATGACCATCAGACAACCCACTGTTTCTTGATCTTACACAACTACAGCTTTCTAGGTATATTTCGGTGGTGGAGTGAGAAACTTGATTCTTGATACAATTGGTCACAATCTTAGCCAGAAGTATCGTAATAGAGTTATTCAGGTATATATATGTCATCCATTCTTATTTACATGAGCTTAAGTTGTGTGAGTTTAGAAAATTTGACAATGCTTTCTTCTAATTGATTAAAGATAATTCGCCATGAACCCAAGTTCATAAATGATAAAATATAAATGTTTACCCACTTTGTTCCTTTACCACTGTTGGATACAATTTTTTAATTTATTAGTGTACAATATAGTCACAGTTAATTATGGCATCTCTAGTTTATGTTGTTTTGCTGTCAGAGGTATGAGGGTTCAAATTTTGGAATTGTGGTTCAGAGAGAAAAATCTACCAGGATTACAACGATTAATAAGTGTGTCAGTTTGATGATCTGATTAATTTCTTATTAACAGTTCTTAGTATAATCTATTTATGTTGGTGAGTTTATACTAAAATCTCGGGAAGTCCACATTAGAATATATTTGTAAATTGGTGCATTAAATGGGTGTGAAGTCTGAATTTACTTGGTTGCAGAGCCAACATGGCTGACATAATTTTAAGAAAAACTAACTGTTGCCTCTATAAGTCTGCTTCACAGGCTTTGATGCCTGGTATAACATCGATATGTATGGGGAAATATTTTACTATGAGTACATTGCGCAGCTTTCGTTGTTAGATCAAGCTTTGGCAAAGTGATTAGCGGCTGAAGTAGCAGTTCTTTTTCCCCCTTCATTTCATATTTTATCATAAAAAAAACTCATAGTGATCAACATTGTAAAAAGTAACATGGGTATTTGGACCAAATGGTGAAGGAACACATCCAAATAGCTTACTTCCAGCAATAAGGCGGTTGAATATCTTCAAAACAACAGCTTGAAATATGGCAGAAAAAATGAAAAATTCCAACCTATTGAATGCTGACGTTGTGGTTTATTTTACATAATCTAAGCTAACATCCTTTTATGTAAAATTTTGAAGCACGAAGCTGGCCACTTCTTGATAGCGTATTTGCTTGGGGTCCTTCCCAAAGGATACAGTATCACAAGTTTAGATACATTCATAAAAAAGGGCTCACTGAATGTGCAAGCTGGGACAGCTTTTGTTGACTTTGAGTTCCTTCAAGAGGTTAGTTTTCTTATCACCTCCATTTTTACCACCACTATTTTGGAAAATGATGATATCTTATTGTCTGTAACCTTTAAGTTTCGAGATGCCCTGTTTCTATCCTCTAGATTTGTGAAGTGTATGATGCACAATCTTGTGACTCGCTGTTGCTGTTACTCTGGTCAAAGGCTTTCTTCAGACAACCCCTCTATCGACTAGTTTGTCATGGATGTACAAAATGGTGAAGGGTAATTGTTAGAGATATTAGCTATTCTAGCAAAACCAGAGTTACAGTCTGAAAGCAGTGTACTGATAAGAACCAGCATTACCTATCCTTTTTTCTCCATTCTCTTTTGCCCATAATAAAGGATGAAATGTTATTGTTATTGCATTTTTATGACGCAGTTAATAATCTATTGAACACGAAAAAGTGGATGAACTGTATCAACATAACACATCTTTAAGCATATGGTGAACGGCTGTTCTGATATAAATTTCTGAGCAGGCATTCAGCTTAACATGAGTACATGACTTCTGTTTTATGCCATTTCTTCCTGGTTAAAACAAAGAGTTGAGAAGATAAAACTTGAAGTGTGTCTTGATGTTTGAATCCTTCATGATGCTTATGTTACAGTAATTATTTATAGTATAATGCCCACCAGTTCAGTTCATCATATTAAAAAGGAATGCAATAATCACGCAATGCCATTCATATGTTATGGTTTAAAAAGTATTGCCATTATGTGATCGCAAAATAAATGTAGTGTGCATTTTATATTGTTATTGTTCTACGCCTTTTTTCCAAAAAAAAAAAATTGCATGTTATATGCGGACTAGGCTAATAATTATCTTTTATACCCAGGTCAATTCAGGCAAACTATCTGCCACGGTAAGGATTTCTAATCAACATTATCTTGTATAAAGCATGTAAAATAGACTGAGATGTGATTCGTTCAGCTTCAAGACCTATTGTTGGTTGGTGATAATCCTTGGATTATCTTGGGGGTAAACACTTGTCGGAAGTAGGTCAGACAGCGGCGACTTTTGGTAGAACGGTGCTAGGTGGAAGAGTGCACTAATTGAGGGAGAAACACATCTAGAAAAGCTGGCCATGGAACGGATTAGAGCTGAAGTTTAGAACTAGGACCCATTTATTCATTTATAAAAGTATGCACAACCCCATTCTTACATAGTTATGGAAAGGAATATATAACAGTGTAATCTAGTCTTATATCTCTAAAATAACAAAATGAAGATGCTGCTGGACTAATGTGCATTTCTGTTTGCATACATGAACAATGTCAGAACTCAAAAAGAGTCCGTAAAGCATATTCTGATAAAAATATATTTACTTTAATTCAAATTCGACATGATTTTTTCCATTTAGTGTTGAATAATGAAAGTAACATCGAAATAAAACAGTCTTGATTGATTCAGGAGAAATTTCAAGGCCTTAGGCCTCCCAGTAGCCCCCAAGAAATTTCCATCATCCATTTAATACATAAGGCGTATTATGTGTAGATCCATTGATTAAGGAGTGAATGGAACCAAGAGAAAGGGAGGAGAATTTACGAATTTACGTTATCCTTATTATTCAACAATTTAAATATCTTGAAAACTGGAAATTGAACAAGAAAAGCATTACATATAAACGCAGGTTAGATGGGATGGAGTAAAGTGGGGGGAAAGAAGGTTAACGTCAATAAATTTGCACACATCTTACGTTTTGAAATTAGAGAAGACTATATGCTTCATAAAATGGGGTACTTTGTCAATAATTGATCATTCCCTTTTTGAAAGCTCCCTTTTGCATAGTTGTATGCATATTACTCCCTTTGTTTCATATTATAAGATGTTTTGATTTTTTTTCTTAGCCAAACTTCTTTAAATTTGATCAAATTTATAGAATAACGTATCAACATTTGCAACACCAACCAAACAAACTATCAAAATATATTTAATGTTAGATTTAATGAAACTAATTTAGTGTTATAAGATTTGTTACATTTGTGTATAAACATAGTCATAGTCAAACTTATAGAAGTTTGACTTTGAAAAGTCAAAGCGTCTTATAGTATAAAACCAAGGGAGCAACTATTATAACATTGTAACTTAATATTCAAATGAGAACATTTGCACCATAGCATTTTGTTGGTGTTAAGTCTGGATTTTTTTCTTTTTGTGATGATGTTTGTGATGAACAGTTGACTATACGTTGGATCTAATGGCAGATGTTGAACAAGTTCTCATGCATTGCCTTGGCTGGAGTAGCAACAGAGTATCTTTTGTATGGATATGCTGAAGGCGGACTAGCTGACATTGGGCAAGTATGTAGGCATGGGTAGTCGACAGACTCTGAATTTTGATAGCCATTGTGGAACCACATCAACATTGTTTATTTTATGCGTCCTTTTTTTTTTTTTTTGCAATTACAGCTAGATGGATTGCTCAAAGGTCTAGGTTTCACCCAGAAGAAAGCTGATTCACAGGTGAGATGGGCTGTGCTGAATACTGTACTTGCACTGCGTCGCCATAAAAAGGCCAGATCACAGCTCGCGGAGGCAATGTCCTCTGGGAAGTCAGTTGGATCTTGCATCGGGGTCATAGAAGAGAATATAAACTCTGAGGATATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001603